RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 ALBP02768 609 aa23.93■■□□□ 1.42
PDF-201ENST00000288022 ALDOAP04075 364 aaKnown RBP23.93■■□□□ 1.42
PDF-201ENST00000288022 ABHD2P08910 425 aa23.93■■□□□ 1.42
PDF-201ENST00000288022 SFTPCP11686 197 aa23.93■■□□□ 1.42
PDF-201ENST00000288022 SLC6A12P48065 614 aa23.93■■□□□ 1.42
PDF-201ENST00000288022 HSPA7P48741 367 aa23.93■■□□□ 1.42
PDF-201ENST00000288022 KCNAB2Q13303 367 aa23.93■■□□□ 1.42
PDF-201ENST00000288022 SSPNQ14714 243 aa23.93■■□□□ 1.42
PDF-201ENST00000288022 CENPLQ8N0S6 344 aaPredicted RBP23.93■■□□□ 1.42
PDF-201ENST00000288022 OR4K1Q8NGD4 311 aa23.93■■□□□ 1.42
PDF-201ENST00000288022 SLC13A3Q8WWT9 602 aa23.93■■□□□ 1.42
PDF-201ENST00000288022 MVB12AQ96EY5 273 aa23.93■■□□□ 1.42
PDF-201ENST00000288022 MMABQ96EY8 250 aaPredicted RBP23.93■■□□□ 1.42
PDF-201ENST00000288022 TMEM79Q9BSE2 394 aa23.93■■□□□ 1.42
PDF-201ENST00000288022 YIPF2Q9BWQ6 316 aa23.93■■□□□ 1.42
PDF-201ENST00000288022 DRC3Q9H069 523 aa23.93■■□□□ 1.42
PDF-201ENST00000288022 ADNPQ9H2P0 1102 aa23.93■■□□□ 1.42
PDF-201ENST00000288022 PELI2Q9HAT8 420 aa23.93■■□□□ 1.42
PDF-201ENST00000288022 GEMIN8Q9NWZ8 242 aaKnown RBP23.93■■□□□ 1.42
PDF-201ENST00000288022 A0A0A6YYC8 382 aaPredicted RBP23.92■■□□□ 1.42
PDF-201ENST00000288022 TRBC2A0A5B9 178 aa23.92■■□□□ 1.42
PDF-201ENST00000288022 I3L1I5 382 aaPredicted RBP23.92■■□□□ 1.42
PDF-201ENST00000288022 TAPBPO15533 448 aa23.92■■□□□ 1.42
PDF-201ENST00000288022 RIPK2O43353 540 aa23.92■■□□□ 1.42
PDF-201ENST00000288022 ZNF500O60304 480 aaPredicted RBP23.92■■□□□ 1.42
PDF-201ENST00000288022 IPO13O94829 963 aaKnown RBP23.92■■□□□ 1.42
PDF-201ENST00000288022 GLRBP48167 497 aa23.92■■□□□ 1.42
PDF-201ENST00000288022 KCNC1P48547 511 aa23.92■■□□□ 1.42
PDF-201ENST00000288022 NKG7Q16617 165 aa23.92■■□□□ 1.42
PDF-201ENST00000288022 KLC3Q6P597 504 aa23.92■■□□□ 1.42
PDF-201ENST00000288022 NXPE4Q6UWF7 544 aa23.92■■□□□ 1.42
PDF-201ENST00000288022 SHISA6Q6ZSJ9 500 aa23.92■■□□□ 1.42
PDF-201ENST00000288022 SNX31Q8N9S9 440 aa23.92■■□□□ 1.42
PDF-201ENST00000288022 PDPRQ8NCN5 879 aa23.92■■□□□ 1.42
PDF-201ENST00000288022 ZNF740Q8NDX6 193 aa23.92■■□□□ 1.42
PDF-201ENST00000288022 ESAMQ96AP7 390 aa23.92■■□□□ 1.42
PDF-201ENST00000288022 AIF1LQ9BQI0 150 aa23.92■■□□□ 1.42
PDF-201ENST00000288022 SOX17Q9H6I2 414 aaPredicted RBP23.92■■□□□ 1.42
PDF-201ENST00000288022 WDR54Q9H977 334 aa23.92■■□□□ 1.42
PDF-201ENST00000288022 NUDT4Q9NZJ9 180 aa23.92■■□□□ 1.42
PDF-201ENST00000288022 ZNF180Q9UJW8 692 aa23.92■■□□□ 1.42
PDF-201ENST00000288022 NXT1Q9UKK6 140 aaKnown RBP23.92■■□□□ 1.42
PDF-201ENST00000288022 KERAO60938 352 aa23.91■■□□□ 1.42
PDF-201ENST00000288022 RFPL1O75677 317 aa23.91■■□□□ 1.42
PDF-201ENST00000288022 STK16O75716 305 aa23.91■■□□□ 1.42
PDF-201ENST00000288022 SERPIND1P05546 499 aa23.91■■□□□ 1.42
PDF-201ENST00000288022 SLC35G6P0C7Q6 338 aa23.91■■□□□ 1.42
PDF-201ENST00000288022 GNAZP19086 355 aa23.91■■□□□ 1.42
PDF-201ENST00000288022 CNTFP26441 200 aa23.91■■□□□ 1.42
PDF-201ENST00000288022 OCA2Q04671 838 aa23.91■■□□□ 1.42
PDF-201ENST00000288022 CDC16Q13042 620 aa23.91■■□□□ 1.42
PDF-201ENST00000288022 ATP1A4Q13733 1029 aa23.91■■□□□ 1.42
PDF-201ENST00000288022 KLHDC8AQ8IYD2 350 aa23.91■■□□□ 1.42
PDF-201ENST00000288022 ZCCHC10Q8TBK6 192 aa23.91■■□□□ 1.42
PDF-201ENST00000288022 DCAKDQ8WVC6 231 aa23.91■■□□□ 1.42
PDF-201ENST00000288022 ATOH8Q96SQ7 321 aa23.91■■□□□ 1.42
PDF-201ENST00000288022 SLC26A1Q9H2B4 701 aa23.91■■□□□ 1.42
PDF-201ENST00000288022 SPNS1Q9H2V7 528 aa23.91■■□□□ 1.42
PDF-201ENST00000288022 DNAJC11Q9NVH1 559 aa23.91■■□□□ 1.42
PDF-201ENST00000288022 ZNF282Q9UDV7 671 aaPredicted RBP23.91■■□□□ 1.42
PDF-201ENST00000288022 MRPS2Q9Y399 296 aaKnown RBP23.91■■□□□ 1.42
PDF-201ENST00000288022 UBXN8O00124 270 aa23.9■■□□□ 1.42
PDF-201ENST00000288022 NDUFS4O43181 175 aa23.9■■□□□ 1.42
PDF-201ENST00000288022 CCNT2O60583 730 aaKnown RBP23.9■■□□□ 1.42
PDF-201ENST00000288022 KLHL2O95198 593 aa23.9■■□□□ 1.42
PDF-201ENST00000288022 UMODP07911 640 aa23.9■■□□□ 1.42
PDF-201ENST00000288022 VARSP26640 1264 aaKnown RBP23.9■■□□□ 1.42
PDF-201ENST00000288022 GGT5P36269 586 aa23.9■■□□□ 1.42
PDF-201ENST00000288022 AVPR1BP47901 424 aa23.9■■□□□ 1.42
PDF-201ENST00000288022 CSRP3P50461 194 aa23.9■■□□□ 1.42
PDF-201ENST00000288022 REEP5Q00765 189 aa23.9■■□□□ 1.42
PDF-201ENST00000288022 CHAF1BQ13112 559 aa23.9■■□□□ 1.42
PDF-201ENST00000288022 DSG2Q14126 1118 aa23.9■■□□□ 1.42
PDF-201ENST00000288022 FAM53BQ14153 422 aa23.9■■□□□ 1.42
PDF-201ENST00000288022 RBBP5Q15291 538 aaKnown RBP23.9■■□□□ 1.42
PDF-201ENST00000288022 CPZQ66K79 652 aa23.9■■□□□ 1.42
PDF-201ENST00000288022 TMEM151BQ8IW70 566 aa23.9■■□□□ 1.42
PDF-201ENST00000288022 PRSS58Q8IYP2 241 aa23.9■■□□□ 1.42
PDF-201ENST00000288022 ARHGEF39Q8N4T4 335 aa23.9■■□□□ 1.42
PDF-201ENST00000288022 EIF1ADQ8N9N8 165 aaKnown RBP23.9■■□□□ 1.42
PDF-201ENST00000288022 TM4SF19Q96DZ7 209 aa23.9■■□□□ 1.42
PDF-201ENST00000288022 CAPS2Q9BXY5 557 aa23.9■■□□□ 1.42
PDF-201ENST00000288022 ACSS2Q9NR19 701 aa23.9■■□□□ 1.42
PDF-201ENST00000288022 TRPC4Q9UBN4 977 aa23.9■■□□□ 1.42
PDF-201ENST00000288022 PTBP2Q9UKA9 531 aaKnown RBP23.9■■□□□ 1.42
PDF-201ENST00000288022 SEC16AO15027 2179 aa23.89■■□□□ 1.42
PDF-201ENST00000288022 SYCE1LA8MT33 242 aa23.89■■□□□ 1.41
PDF-201ENST00000288022 TRIM49D1C9J1S8 452 aa23.89■■□□□ 1.41
PDF-201ENST00000288022 PEX12O00623 359 aa23.89■■□□□ 1.41
PDF-201ENST00000288022 FFAR3O14843 346 aa23.89■■□□□ 1.41
PDF-201ENST00000288022 CLGNO14967 610 aa23.89■■□□□ 1.41
PDF-201ENST00000288022 GPR42O15529 346 aa23.89■■□□□ 1.41
PDF-201ENST00000288022 FOXS1O43638 330 aa23.89■■□□□ 1.41
PDF-201ENST00000288022 H2AFYO75367 372 aaKnown RBP23.89■■□□□ 1.41
PDF-201ENST00000288022 C1GALT1C1LP0DN25 315 aa23.89■■□□□ 1.41
PDF-201ENST00000288022 MYBL2P10244 700 aa23.89■■□□□ 1.41
PDF-201ENST00000288022 SLC29A2Q14542 456 aa23.89■■□□□ 1.41
PDF-201ENST00000288022 ACAP2Q15057 778 aa23.89■■□□□ 1.41
PDF-201ENST00000288022 LGSNQ5TDP6 509 aa23.89■■□□□ 1.41
PDF-201ENST00000288022 TMEM214Q6NUQ4 689 aaKnown RBP23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms