RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 EXO1Q9UQ84 846 aaKnown RBP15.99■□□□□ 0.15
CCDC40-201ENST00000269318 AP4B1Q9Y6B7 739 aa15.99■□□□□ 0.15
CCDC40-201ENST00000269318 FAM149AA5PLN7 773 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 A6NHS1 94 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 SHISA7A6NL88 538 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 GABRR3A8MPY1 467 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 KCNJ13O60928 360 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 SMNDC1O75940 238 aaKnown RBP eCLIP15.98■□□□□ 0.15
CCDC40-201ENST00000269318 KLHL18O94889 574 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 TGFB1P01137 390 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 CKMT2P17540 419 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 POU3F3P20264 500 aaPredicted RBP15.98■□□□□ 0.15
CCDC40-201ENST00000269318 CCT8P50990 548 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 HKDC1Q2TB90 917 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 ANKRD26P1Q6NSI1 321 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 PPP4R4Q6NUP7 873 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 TMEM92Q6UXU6 159 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 ZNF551Q7Z340 670 aaPredicted RBP15.98■□□□□ 0.15
CCDC40-201ENST00000269318 FAM124AQ86V42 546 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 C17orf64Q86WR6 236 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 EPHX4Q8IUS5 362 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 MICU2Q8IYU8 434 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 LINC01555Q8NAE3 123 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 CDC26Q8NHZ8 85 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 SMPDL3AQ92484 453 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 COQ8BQ96D53 544 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 OR51B5Q9H339 312 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 OSGEPL1Q9H4B0 414 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 PELI2Q9HAT8 420 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 MAPRE3Q9UPY8 281 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 NCKAP1Q9Y2A7 1128 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 BRWD1Q9NSI6 2320 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 CACNB4O00305 520 aaPredicted RBP15.98■□□□□ 0.15
CCDC40-201ENST00000269318 TXNDC9O14530 226 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 FPGTO14772 594 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 HOXC4P09017 264 aaPredicted RBP15.98■□□□□ 0.15
CCDC40-201ENST00000269318 IDSP22304 550 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 CTBSQ01459 385 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 SLC14A1Q13336 389 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 PDK3Q15120 406 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 NRF1Q16656 503 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 INTS11Q5TA45 600 aaKnown RBP15.98■□□□□ 0.15
CCDC40-201ENST00000269318 METTL4Q8N3J2 472 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 ABHD11Q8NFV4 315 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 FERD3LQ96RJ6 166 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 MYOCQ99972 504 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 TBCDQ9BTW9 1192 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 DUSP26Q9BV47 211 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 PCBD2Q9H0N5 130 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 TTYH1Q9H313 450 aaPredicted RBP15.98■□□□□ 0.15
CCDC40-201ENST00000269318 Q9H521 79 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 FGF22Q9HCT0 170 aa15.98■□□□□ 0.15
CCDC40-201ENST00000269318 GNG14A0A1W2PPG7 69 aa15.97■□□□□ 0.15
CCDC40-201ENST00000269318 SOCS2O14508 198 aa15.97■□□□□ 0.15
CCDC40-201ENST00000269318 SCELO95171 688 aa15.97■□□□□ 0.15
CCDC40-201ENST00000269318 TBX6O95947 436 aaPredicted RBP15.97■□□□□ 0.15
CCDC40-201ENST00000269318 NDUFV2P19404 249 aa15.97■□□□□ 0.15
CCDC40-201ENST00000269318 ZNF763Q0D2J5 394 aa15.97■□□□□ 0.15
CCDC40-201ENST00000269318 ABHD18Q0P651 414 aa15.97■□□□□ 0.15
CCDC40-201ENST00000269318 CLCA4Q14CN2 919 aa15.97■□□□□ 0.15
CCDC40-201ENST00000269318 ATP6AP1Q15904 470 aa15.97■□□□□ 0.15
CCDC40-201ENST00000269318 CPTPQ5TA50 214 aa15.97■□□□□ 0.15
CCDC40-201ENST00000269318 UGT2A3Q6UWM9 527 aa15.97■□□□□ 0.15
CCDC40-201ENST00000269318 ZBTB49Q6ZSB9 765 aa15.97■□□□□ 0.15
CCDC40-201ENST00000269318 GPR155Q7Z3F1 870 aa15.97■□□□□ 0.15
CCDC40-201ENST00000269318 CLECL1Q8IZS7 167 aa15.97■□□□□ 0.15
CCDC40-201ENST00000269318 KRT78Q8N1N4 520 aa15.97■□□□□ 0.15
CCDC40-201ENST00000269318 RPLP0P6Q8NHW5 317 aa15.97■□□□□ 0.15
CCDC40-201ENST00000269318 WDR48Q8TAF3 677 aa15.97■□□□□ 0.15
CCDC40-201ENST00000269318 FIG4Q92562 907 aa15.97■□□□□ 0.15
CCDC40-201ENST00000269318 CXorf40BQ96DE9 158 aa15.97■□□□□ 0.15
CCDC40-201ENST00000269318 PANX1Q96RD7 426 aa15.97■□□□□ 0.15
CCDC40-201ENST00000269318 SEPHS2Q99611 448 aa15.97■□□□□ 0.15
CCDC40-201ENST00000269318 CENPKQ9BS16 269 aa15.97■□□□□ 0.15
CCDC40-201ENST00000269318 CHID1Q9BWS9 393 aa15.97■□□□□ 0.15
CCDC40-201ENST00000269318 RHBGQ9H310 441 aa15.97■□□□□ 0.15
CCDC40-201ENST00000269318 CUEDC1Q9NWM3 386 aaPredicted RBP15.97■□□□□ 0.15
CCDC40-201ENST00000269318 LIMD1Q9UGP4 676 aa15.97■□□□□ 0.15
CCDC40-201ENST00000269318 SCOCQ9UIL1 159 aa15.97■□□□□ 0.15
CCDC40-201ENST00000269318 V9GYQ6 96 aa15.97■□□□□ 0.15
CCDC40-201ENST00000269318 POM121BA6NF01 834 aa15.96■□□□□ 0.15
CCDC40-201ENST00000269318 SAP18O00422 153 aaKnown RBP15.96■□□□□ 0.15
CCDC40-201ENST00000269318 CXCR6O00574 342 aa15.96■□□□□ 0.15
CCDC40-201ENST00000269318 GMNNO75496 209 aa15.96■□□□□ 0.15
CCDC40-201ENST00000269318 C1QCP02747 245 aa15.96■□□□□ 0.15
CCDC40-201ENST00000269318 PSMB5P28074 263 aa15.96■□□□□ 0.15
CCDC40-201ENST00000269318 HPCAL1P37235 193 aa15.96■□□□□ 0.15
CCDC40-201ENST00000269318 KIAA1024LP59773 190 aa15.96■□□□□ 0.15
CCDC40-201ENST00000269318 PHEXP78562 749 aa15.96■□□□□ 0.15
CCDC40-201ENST00000269318 C6orf52Q5T4I8 152 aa15.96■□□□□ 0.15
CCDC40-201ENST00000269318 PACRGLQ8N7B6 248 aa15.96■□□□□ 0.15
CCDC40-201ENST00000269318 OR4K1Q8NGD4 311 aa15.96■□□□□ 0.15
CCDC40-201ENST00000269318 SH3KBP1Q96B97 665 aa15.96■□□□□ 0.15
CCDC40-201ENST00000269318 FAM120BQ96EK7 910 aaKnown RBP15.96■□□□□ 0.15
CCDC40-201ENST00000269318 REXO5Q96IC2 774 aaKnown RBP15.96■□□□□ 0.15
CCDC40-201ENST00000269318 CAMK1GQ96NX5 476 aa15.96■□□□□ 0.15
CCDC40-201ENST00000269318 CARS2Q9HA77 564 aaKnown RBP15.96■□□□□ 0.15
CCDC40-201ENST00000269318 PRM3Q9NNZ6 103 aa15.96■□□□□ 0.15
CCDC40-201ENST00000269318 UBAP1Q9NZ09 502 aa15.96■□□□□ 0.15
CCDC40-201ENST00000269318 DLGAP2Q9P1A6 1054 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms