RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 ZNF425Q6IV72 752 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 FBXO42Q6P3S6 717 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 KLHL35Q6PF15 583 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 FOXR1Q6PIV2 292 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 TMIGD1Q6UXZ0 262 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 RIPOR1Q6ZS17 1223 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 DGLUCYQ7Z3D6 616 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 PAQR7Q86WK9 346 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 LAS2Q8IYD9 372 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 CCDC197Q8NCU1 140 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 IFI44Q8TCB0 444 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 CCT6BQ92526 530 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 USP7Q93009 1102 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 CNDP2Q96KP4 475 aaKnown RBP9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 AIF1LQ9BQI0 150 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 CCDC3Q9BQI4 270 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 NUDT22Q9BRQ3 303 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 ACPTQ9BZG2 426 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 ZMYND15Q9H091 742 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 SYNDIG1Q9H7V2 258 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 FAM60AQ9NP50 221 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 TMEM9BQ9NQ34 198 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 TCF7L2Q9NQB0 619 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 RAPGEFL1Q9UHV5 662 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 SNX7Q9UNH6 387 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 ARL2BPQ9Y2Y0 163 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 CCL27Q9Y4X3 112 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 LOC105369274A0A096LPK9 316 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 IGHV5-51A0A0C4DH38 117 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 LOC102723532A0A0G2JNH3 316 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 A0A0J9YVX5 310 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 A0A1W2PQM1 296 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 SAP18O00422 153 aaKnown RBP9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 TNFSF14O43557 240 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 LDOC1O95751 146 aaPredicted RBP9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 TBX6O95947 436 aaPredicted RBP9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 CTSBP07858 339 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 CKMT1AP12532 417 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 GRK6P43250 576 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 GPR3P46089 330 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 HK2P52789 917 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 EPHA4P54764 986 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 SNRPNP63162 240 aaKnown RBP9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 GABPB1Q06547 395 aaPredicted RBP9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 LAPTM5Q13571 262 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 CSRP2Q16527 193 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 DEFB110Q30KQ9 67 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 AASDHQ4L235 1098 aaPredicted RBP9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 PAGE2BQ5JRK9 111 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 SPDYAQ5MJ70 313 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 FRMPD2BQ6IN97 320 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 LARP4Q71RC2 724 aaKnown RBP eCLIP9.33□□□□□ -0.922e-6■■■■■ 32.5
SNRNP40-201ENST00000263694 MTDHQ86UE4 582 aaKnown RBP9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 CACNA2D3Q8IZS8 1091 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 OR4N4Q8N0Y3 316 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 KRT78Q8N1N4 520 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 TUBGCP3Q96CW5 907 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 SLC45A3Q96JT2 553 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 MAELQ96JY0 434 aaKnown RBP9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 CATSPER2Q96P56 530 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 TRAPPC9Q96Q05 1148 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 C1orf50Q9BV19 199 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 OR51B5Q9H339 312 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 APOBEC2Q9Y235 224 aaKnown RBP9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 PCDHGB2Q9Y5G2 931 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 PCDHGA11Q9Y5H2 935 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 SPEGQ15772 3267 aa9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 TRBC2A0A5B9 178 aa9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 OR2A25A4D2G3 310 aa9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 ANKDD1BA6NHY2 528 aa9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 FLRT2O43155 660 aa9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 DUX1O43812 170 aa9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 RASSF9O75901 435 aa9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 RPLP0P05388 317 aaKnown RBP9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 ALDOCP09972 364 aaKnown RBP9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 CD1EP15812 388 aa9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 NCF2P19878 526 aaPredicted RBP9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 CXCR2P25025 360 aa9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 SCTRP47872 440 aa9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 SEPHS1P49903 392 aa9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 KCNAB1Q14722 419 aa9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 NR6A1Q15406 480 aa9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 IMPG1Q17R60 797 aa9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 RFTN2Q52LD8 501 aaPredicted RBP9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 CCDC157Q569K6 752 aa9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 ZNF574Q6ZN55 896 aaPredicted RBP9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 ACAD11Q709F0 780 aa9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 TRIM46Q7Z4K8 759 aa9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 BAHD1Q8TBE0 780 aaPredicted RBP9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 ACTRT2Q8TDY3 377 aa9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 APIPQ96GX9 242 aa9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 F2RL3Q96RI0 385 aa9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 SIKE1Q9BRV8 207 aa9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 AICDAQ9GZX7 198 aa9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 SEMA6CQ9H3T2 930 aa9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 KLHL31Q9H511 634 aa9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 DMRT3Q9NQL9 472 aa9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 STARD5Q9NSY2 213 aa9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 PILRAQ9UKJ1 303 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms