RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 KCNK5O95279 499 aa12.18□□□□□ -0.46
RAB3IP-201ENST00000247833 CXCL14O95715 111 aa12.18□□□□□ -0.46
RAB3IP-201ENST00000247833 ACPPP15309 386 aa12.18□□□□□ -0.46
RAB3IP-201ENST00000247833 SERPINB1P30740 379 aa12.18□□□□□ -0.46
RAB3IP-201ENST00000247833 AP1S2P56377 157 aa12.18□□□□□ -0.46
RAB3IP-201ENST00000247833 NPRL3Q12980 569 aa12.18□□□□□ -0.46
RAB3IP-201ENST00000247833 OTOP2Q7RTS6 562 aa12.18□□□□□ -0.46
RAB3IP-201ENST00000247833 CLIP4Q8N3C7 705 aa12.18□□□□□ -0.46
RAB3IP-201ENST00000247833 DNAJB8Q8NHS0 232 aa12.18□□□□□ -0.46
RAB3IP-201ENST00000247833 ZNF347Q96SE7 839 aa12.18□□□□□ -0.46
RAB3IP-201ENST00000247833 FEVQ99581 238 aa12.18□□□□□ -0.46
RAB3IP-201ENST00000247833 CHCHD6Q9BRQ6 235 aa12.18□□□□□ -0.46
RAB3IP-201ENST00000247833 TMEM121BQ9BXQ6 578 aaPredicted RBP12.18□□□□□ -0.46
RAB3IP-201ENST00000247833 GPBP1L1Q9HC44 474 aaPredicted RBP12.18□□□□□ -0.46
RAB3IP-201ENST00000247833 RBMX2Q9Y388 322 aaKnown RBP12.18□□□□□ -0.46
RAB3IP-201ENST00000247833 TMED5Q9Y3A6 229 aa12.18□□□□□ -0.46
RAB3IP-201ENST00000247833 PRKAB1Q9Y478 270 aa12.18□□□□□ -0.46
RAB3IP-201ENST00000247833 TRBV5-4A0A0C4DH59 114 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 AIREO43918 545 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 PRAMEF4O60810 478 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 PDHA2P29803 388 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 KRT20P35900 424 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 GABARAPL2P60520 117 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 MC1RQ01726 317 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 RELAQ04206 551 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 CSTF3Q12996 717 aaKnown RBP12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 UAP1L1Q3KQV9 507 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 COLEC12Q5KU26 742 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 PRAMEF9Q5VWM5 478 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 NPAS3Q8IXF0 933 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 ZZZ3Q8IYH5 903 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 HUS1BQ8NHY5 278 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 CAPNS2Q96L46 248 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 CEP19Q96LK0 163 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 WDR12Q9GZL7 423 aaKnown RBP12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 TRIT1Q9H3H1 467 aaKnown RBP12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 GPN2Q9H9Y4 310 aaPredicted RBP12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 TRIM39Q9HCM9 518 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 CREBZFQ9NS37 354 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 ERGIC3Q9Y282 383 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 WNT6Q9Y6F9 365 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 GABRR3A8MPY1 467 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 TTC34A8MYJ7 566 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 RGS5O15539 181 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 TBX1O43435 398 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 LZTS3O60299 673 aaPredicted RBP12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 C6orf47O95873 294 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 JUNBP17275 347 aaPredicted RBP12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 ALOX12P18054 663 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 ITIH1P19827 911 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 S100A5P33763 92 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 CTSKP43235 329 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 DEFB103AP81534 67 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 RAB33AQ14088 237 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 MED22Q15528 200 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 ZXDCQ2QGD7 858 aaPredicted RBP12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 ADPRMQ3LIE5 342 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 LY6G5CQ5SRR4 150 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 ZNF551Q7Z340 670 aaPredicted RBP12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 METTL3Q86U44 580 aaKnown RBP12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 CBARPQ8N350 705 aaPredicted RBP12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 NFKBIDQ8NI38 313 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 ATL1Q8WXF7 558 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 TRMT2BQ96GJ1 504 aaKnown RBP12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 DOK1Q99704 481 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 SLC46A2Q9BY10 475 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 FBXO10Q9UK96 956 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 NEUROG3Q9Y4Z2 214 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 PCDHGA10Q9Y5H3 936 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 CHD5Q8TDI0 1954 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 MKI67P46013 3256 aaKnown RBP12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 SLC22A1O15245 554 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 TGM5O43548 720 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 ATG13O75143 517 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 C9P02748 559 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 TYRP14679 529 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 ST8SIA6P61647 398 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 DAB2P98082 770 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 SLBPQ14493 270 aaKnown RBP eCLIP12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 HIST2H2ACQ16777 129 aaPredicted RBP12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 CATSPEREQ5SY80 951 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 HIST2H2AA3Q6FI13 130 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 POC5Q8NA72 575 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 OR10G2Q8NGC3 310 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 UBTD2Q8WUN7 234 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 PPCDCQ96CD2 204 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 LGALS12Q96DT0 336 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 HEPHQ9BQS7 1158 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 HERC2P3Q9BVR0 1158 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 DCSTAMPQ9H295 470 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 ITM2CQ9NQX7 267 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 ATAD3AQ9NVI7 634 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 TBCCD1Q9NVR7 557 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 FAM120CQ9NX05 1096 aaKnown RBP12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 DOCK6Q96HP0 2047 aa12.17□□□□□ -0.46
RAB3IP-201ENST00000247833 RFPL2O75678 378 aa12.16□□□□□ -0.46
RAB3IP-201ENST00000247833 LRIF1Q5T3J3 769 aa12.16□□□□□ -0.46
RAB3IP-201ENST00000247833 RAET1GQ6H3X3 334 aa12.16□□□□□ -0.46
RAB3IP-201ENST00000247833 LGI4Q8N135 537 aa12.16□□□□□ -0.46
RAB3IP-201ENST00000247833 SLC35A5Q9BS91 424 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms