RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 IFNW1P05000 195 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 ETFAP13804 333 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 VIPR2P41587 438 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 SDE2Q6IQ49 451 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 RNF130Q86XS8 419 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 MFSD2AQ8NA29 543 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 POF1BQ8WVV4 589 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 RAD51AP1Q96B01 352 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 BRINP2Q9C0B6 783 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 TRIM45Q9H8W5 580 aaPredicted RBP13.13□□□□□ -0.31
RAB3D-201ENST00000222120 THG1LQ9NWX6 298 aaKnown RBP13.13□□□□□ -0.31
RAB3D-201ENST00000222120 TUBA8Q9NY65 449 aaPredicted RBP13.13□□□□□ -0.31
RAB3D-201ENST00000222120 EHD3Q9NZN3 535 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 TMA7Q9Y2S6 64 aaKnown RBP13.13□□□□□ -0.31
RAB3D-201ENST00000222120 PCDHGB3Q9Y5G1 929 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 H0YAE9 185 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 H3BMQ9 156 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 ADAMDEC1O15204 470 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 SLC31A1O15431 190 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 GADD45GO95257 159 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 SOX14O95416 240 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 FPR1P21462 350 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 CDKN2CP42773 168 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 C1DQ13901 141 aaKnown RBP13.13□□□□□ -0.31
RAB3D-201ENST00000222120 ZNF846Q147U1 533 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 TMEM236Q5W0B7 351 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 NEK5Q6P3R8 708 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 RBM12BQ8IXT5 1001 aaKnown RBP13.13□□□□□ -0.31
RAB3D-201ENST00000222120 CAPSLQ8WWF8 208 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 COG8Q96MW5 612 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 CCNB1IP1Q9NPC3 277 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 ERVW-1Q9UQF0 538 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 ARID1BQ8NFD5 2236 aaPredicted RBP13.13□□□□□ -0.31
RAB3D-201ENST00000222120 MYL12BO14950 172 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 SERPINI2O75830 405 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 TSPAN12O95859 305 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 RPN2P04844 631 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 SYN1P17600 705 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 PDHA2P29803 388 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 CATSPEREQ5SY80 951 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 KRT73Q86Y46 540 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 MAGEB10Q96LZ2 347 aaPredicted RBP13.13□□□□□ -0.31
RAB3D-201ENST00000222120 AIF1LQ9BQI0 150 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 SLC12A9Q9BXP2 914 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 TRIM39Q9HCM9 518 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 C5AR2Q9P296 337 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 ABCD2Q9UBJ2 740 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 FBXW2Q9UKT8 454 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 ENTPD4Q9Y227 616 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 LYVE1Q9Y5Y7 322 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 WDR81Q562E7 1941 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 EFCAB10A6NFE3 127 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 ZDHHC11BP0C7U3 371 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 ACP5P13686 325 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 MXD1Q05195 221 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 C9orf64Q5T6V5 341 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 TRIM69Q86WT6 500 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 DEPDC4Q8N2C3 294 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 NUS1Q96E22 293 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 FUNDC2Q9BWH2 189 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 IKZF5Q9H5V7 419 aa13.13□□□□□ -0.31
RAB3D-201ENST00000222120 JUPP14923 745 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 PFKLP17858 780 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 PTNP21246 168 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 CBLBQ13191 982 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 SLC39A5Q6ZMH5 540 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 AMZ2Q86W34 360 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 YTHDF1Q9BYJ9 559 aaKnown RBP13.12□□□□□ -0.31
RAB3D-201ENST00000222120 SEMA3GQ9NS98 782 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 ZNF282Q9UDV7 671 aaPredicted RBP13.12□□□□□ -0.31
RAB3D-201ENST00000222120 TMED5Q9Y3A6 229 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 PARP14Q460N5 1801 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 ANKRD33BA6NCL7 494 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 EFCAB9A8MZ26 197 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 MFN2O95140 757 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 MT-ND2P03891 347 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 NUDT7P0C024 238 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 CLCNKAP51800 687 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 CDK6Q00534 326 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 MC1RQ01726 317 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 RUNDC3AQ59EK9 446 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 PLEKHS1Q5SXH7 462 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 TFGQ92734 400 aaPredicted RBP13.12□□□□□ -0.31
RAB3D-201ENST00000222120 TBC1D3DA0A087WVF3 549 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 TBC1D3IA0A087WXS9 549 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 TBC1D3EA0A087X179 549 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 TBC1D3KA0A087X1G2 549 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 TBC1D3FA6NER0 549 aaPredicted RBP13.12□□□□□ -0.31
RAB3D-201ENST00000222120 ARHGEF33A8MVX0 844 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 TBC1D3LB9A6J9 549 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 SLC1A7O00341 560 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 TBX1O43435 398 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 LATO43561 262 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 BCHEP06276 602 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 TBC1D3HP0C7X1 549 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 CXCR2P25025 360 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 AZGP1P25311 298 aaKnown RBP13.12□□□□□ -0.31
RAB3D-201ENST00000222120 RPP38P78345 283 aaKnown RBP13.12□□□□□ -0.31
RAB3D-201ENST00000222120 ELP6Q0PNE2 266 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 SMN1Q16637 294 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms