RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 CXXC1Q9P0U4 656 aaPredicted RBP13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 ZNF639Q9UID6 485 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 OR14I1A6ND48 311 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 H3BNX3 289 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 CDC40O60508 579 aaKnown RBP eCLIP13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 TRAPPC6AO75865 159 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 SNAP29O95721 258 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 ZNF3P17036 446 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 CCKBRP32239 447 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 ARFRP1Q13795 201 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 PIK3R3Q92569 461 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 PYURFQ96I23 114 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 ANKRA2Q9H9E1 313 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 EIF2B3Q9NR50 452 aaKnown RBP13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 ELOVL2Q9NXB9 296 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 SQORQ9Y6N5 450 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 PLD2O14939 933 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 AKAP8O43823 692 aaKnown RBP13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 DUOXA1Q1HG43 343 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 PTCHD3Q3KNS1 767 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 TNFAIP8L3Q5GJ75 292 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 SH3D19Q5HYK7 790 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 NUP54Q7Z3B4 507 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 ZFP41Q8N8Y5 198 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 HAPLN3Q96S86 360 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 MUC13Q9H3R2 512 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 ZDHHC3Q9NYG2 299 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 CREG1O75629 220 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 RENP00797 406 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 GJA8P48165 433 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 ABCA11PQ4W5N1 156 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 CARD17Q5XLA6 110 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 FRG2Q64ET8 278 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 RAB2BQ8WUD1 216 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 FRG2BQ96QU4 278 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 THUMPD1Q9NXG2 353 aaKnown RBP13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 TAS2R7Q9NYW3 318 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 GSKIPQ9P0R6 139 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 MYEF2Q9P2K5 600 aaKnown RBP13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 DNAJB4Q9UDY4 337 aa13.22□□□□□ -0.29
TGFBR3-201ENST00000212355 A0A1W2PPW3 197 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 OGNP20774 298 aaKnown RBP13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 GLDCP23378 1020 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 CXCR1P25024 350 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 ACADLP28330 430 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 MAGEA12P43365 314 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 STT3AP46977 705 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 LASP1Q14847 261 aaKnown RBP13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 PQLC3Q8N755 202 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 POGLUT1Q8NBL1 392 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 HDAC2Q92769 488 aaKnown RBP13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 CAPNS2Q96L46 248 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 KCTD7Q96MP8 289 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 TRIM2Q9C040 744 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 SLC32A1Q9H598 525 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 TRPV4Q9HBA0 871 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 SSU72Q9NP77 194 aaKnown RBP13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 STOX2Q9P2F5 926 aaPredicted RBP13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 VNN2O95498 520 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 ADH5P11766 374 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 SOX2P48431 317 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 ENPP2Q13822 863 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 TEAD4Q15561 434 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 GPRIN1Q7Z2K8 1008 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 SMOQ99835 787 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 C17orf62Q9BQA9 187 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 PAAF1Q9BRP4 392 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 ITPAQ9BY32 194 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 PREBQ9HCU5 417 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 IL20RAQ9UHF4 553 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 NUP50Q9UKX7 468 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 LATO43561 262 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 CD97P48960 835 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 NIPA2Q8N8Q9 360 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 SLC37A3Q8NCC5 494 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 OR52E4Q8NGH9 312 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 OTUB2Q96DC9 234 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 SGIP1Q9BQI5 828 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 CCM2Q9BSQ5 444 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 FARSBQ9NSD9 589 aaKnown RBP13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 CLDND1Q9NY35 253 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 ERVW-1Q9UQF0 538 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 YIPF1Q9Y548 306 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 MRC1P22897 1456 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 SOX30O94993 753 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 TNFRSF1BP20333 461 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 NR4A2P43354 598 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 GBX2P52951 348 aaPredicted RBP13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 NKX2-5P52952 324 aaPredicted RBP13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 RAB2AP61019 212 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 MAPK14Q16539 360 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 ZNF347Q96SE7 839 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 TBL1XR1Q9BZK7 514 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 C14orf105Q9NVL8 296 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 P2RX2Q9UBL9 471 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 TNFRSF10DQ9UBN6 386 aa13.21□□□□□ -0.29
TGFBR3-201ENST00000212355 MPZL2O60487 215 aa13.21□□□□□ -0.3
TGFBR3-201ENST00000212355 GJB5O95377 273 aa13.21□□□□□ -0.3
TGFBR3-201ENST00000212355 SNU13P55769 128 aaKnown RBP13.21□□□□□ -0.3
TGFBR3-201ENST00000212355 HNRNPA0Q13151 305 aaKnown RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms