RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 WNT9AO14904 365 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 PRKD3O94806 890 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 VAPBO95292 243 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 HTR1AP08908 422 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 CD53P19397 219 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 CSNK2A2P19784 350 aaPredicted RBP3.36□□□□□ -1.87
NEB-201ENST00000172853 OVGP1Q12889 678 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 USF2Q15853 346 aaPredicted RBP3.36□□□□□ -1.87
NEB-201ENST00000172853 RNASE12Q5GAN4 147 aaKnown RBP3.36□□□□□ -1.87
NEB-201ENST00000172853 CCNJQ5T5M9 372 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 LYSMD4Q5XG99 296 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 C6orf89Q6UWU4 347 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 ZPBP2Q6X784 338 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 MCOLN2Q8IZK6 566 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 PARP8Q8N3A8 854 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 IL17REQ8NFR9 667 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 OR7A2PQ8NGA2 310 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 KIAA1683Q9H0B3 1180 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 MEAF6Q9HAF1 191 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 RCOR3Q9P2K3 495 aaPredicted RBP3.36□□□□□ -1.87
NEB-201ENST00000172853 PCDHGA1Q9Y5H4 931 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 PNPLA7Q6ZV29 1317 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 SMIM35A0A1B0GVV1 85 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 KLRG2A4D1S0 409 aaPredicted RBP3.36□□□□□ -1.87
NEB-201ENST00000172853 PRRG2O14669 202 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 CRTAPO75718 401 aaPredicted RBP3.36□□□□□ -1.87
NEB-201ENST00000172853 CD79AP11912 226 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 MAPK3P27361 379 aaPredicted RBP3.36□□□□□ -1.87
NEB-201ENST00000172853 INHBCP55103 352 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 CXCL9Q07325 125 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 SKA3Q8IX90 412 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 CNEP1R1Q8N9A8 125 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 FBXL8Q96CD0 374 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 C5orf60A6NFR6 353 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 YKT6O15498 198 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 ONECUT3O60422 494 aaPredicted RBP3.36□□□□□ -1.87
NEB-201ENST00000172853 APOL3O95236 402 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 LIPEQ05469 1076 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 FAM69BQ5VUD6 431 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 ATG9BQ674R7 924 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 KCTD13Q8WZ19 329 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 PBX4Q9BYU1 374 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 HAO1Q9UJM8 370 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 ABCG2Q9UNQ0 655 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 DERAQ9Y315 318 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 M0R036 132 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 SSX4O60224 188 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 ZNF44P15621 663 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 RPL7P18124 248 aaKnown RBP3.36□□□□□ -1.87
NEB-201ENST00000172853 EIF1AXP47813 144 aaKnown RBP3.36□□□□□ -1.87
NEB-201ENST00000172853 PLK1P53350 603 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 RAB4BP61018 213 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 DSC1Q08554 894 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 TMEM175Q9BSA9 504 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 PCDH9Q9HC56 1237 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 CNOT6Q9ULM6 557 aaKnown RBP3.36□□□□□ -1.87
NEB-201ENST00000172853 ABCA9Q8IUA7 1624 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 ZNF780AO75290 641 aaPredicted RBP3.35□□□□□ -1.87
NEB-201ENST00000172853 GCGRP47871 477 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 NCBP2P52298 156 aaKnown RBP eCLIP3.35□□□□□ -1.87
NEB-201ENST00000172853 PRKCZQ05513 592 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 KCNJ8Q15842 424 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 EML3Q32P44 896 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 COMTD1Q86VU5 262 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 SLITRK4Q8IW52 837 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 GALNT11Q8NCW6 608 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 SPTSSAQ969W0 71 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 NSUN4Q96CB9 384 aaKnown RBP3.35□□□□□ -1.87
NEB-201ENST00000172853 NLE1Q9NVX2 485 aaPredicted RBP3.35□□□□□ -1.87
NEB-201ENST00000172853 PAK1IP1Q9NWT1 392 aaPredicted RBP3.35□□□□□ -1.87
NEB-201ENST00000172853 NDUFAF4Q9P032 175 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 WDR27A2RRH5 827 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 SOX1O00570 391 aaPredicted RBP3.35□□□□□ -1.87
NEB-201ENST00000172853 PMS2P3Q13401 168 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 IKZF1Q13422 519 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 TUSC3Q13454 348 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 CPSF6Q16630 551 aaKnown RBP eCLIP3.35□□□□□ -1.87
NEB-201ENST00000172853 NUDT13Q86X67 352 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 JAGN1Q8N5M9 183 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 METTL25Q8N6Q8 603 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 PHOSPHO1Q8TCT1 267 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 HM13Q8TCT9 377 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 FAM105AQ9NUU6 356 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 C2orf42Q9NWW7 574 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 VNN3Q9NY84 501 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 GTF2IRD1Q9UHL9 959 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 LAMP5Q9UJQ1 280 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 FFAR3O14843 346 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 GPR42O15529 346 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 PORP16435 677 aaPredicted RBP3.35□□□□□ -1.87
NEB-201ENST00000172853 L1CAMP32004 1257 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 SHMT2P34897 504 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 UBE2G2P60604 165 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 IRF9Q00978 393 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 ELMOD2Q8IZ81 293 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 KIF2BQ8N4N8 673 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 TAAR8Q969N4 342 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 MOAP1Q96BY2 351 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 HIC2Q96JB3 615 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 OR2AG1Q9H205 316 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms