RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Phc2Q9QWH1 850 aa17.74■□□□□ 0.43
Trim47-202ENSMUST00000106441 CtszQ9WUU7 306 aa17.74■□□□□ 0.43
Trim47-202ENSMUST00000106441 HnrnpfQ9Z2X1 415 aaKnown RBP17.74■□□□□ 0.43
Trim47-202ENSMUST00000106441 Otud3B1AZ99 396 aa17.74■□□□□ 0.43
Trim47-202ENSMUST00000106441 Ccnb1ip1D3Z3K2 276 aa17.74■□□□□ 0.43
Trim47-202ENSMUST00000106441 Dgcr6O35347 198 aa17.74■□□□□ 0.43
Trim47-202ENSMUST00000106441 Elovl3O35949 271 aa17.74■□□□□ 0.43
Trim47-202ENSMUST00000106441 Cyp8b1O88962 500 aa17.74■□□□□ 0.43
Trim47-202ENSMUST00000106441 Slc2a2P14246 523 aa17.74■□□□□ 0.43
Trim47-202ENSMUST00000106441 Cdh2P15116 906 aa17.74■□□□□ 0.43
Trim47-202ENSMUST00000106441 Prdx3P20108 257 aa17.74■□□□□ 0.43
Trim47-202ENSMUST00000106441 Csf2rbP26955 896 aa17.74■□□□□ 0.43
Trim47-202ENSMUST00000106441 Mrps6P58064 125 aa17.74■□□□□ 0.43
Trim47-202ENSMUST00000106441 Ntsr2P70310 416 aa17.74■□□□□ 0.43
Trim47-202ENSMUST00000106441 Usp39Q3TIX9 564 aa17.74■□□□□ 0.43
Trim47-202ENSMUST00000106441 PtprnQ60673 979 aa17.74■□□□□ 0.43
Trim47-202ENSMUST00000106441 Rftn1Q6A0D4 554 aa17.74■□□□□ 0.43
Trim47-202ENSMUST00000106441 Itln1bQ80ZA0 313 aa17.74■□□□□ 0.43
Trim47-202ENSMUST00000106441 Atl1Q8BH66 558 aa17.74■□□□□ 0.43
Trim47-202ENSMUST00000106441 Bend7Q8BSV3 434 aa17.74■□□□□ 0.43
Trim47-202ENSMUST00000106441 Casp9Q8C3Q9 454 aa17.74■□□□□ 0.43
Trim47-202ENSMUST00000106441 Gprc6aQ8K4Z6 928 aa17.74■□□□□ 0.43
Trim47-202ENSMUST00000106441 Gabarapl1Q8R3R8 117 aa17.74■□□□□ 0.43
Trim47-202ENSMUST00000106441 Micu1Q8VCX5 477 aa17.74■□□□□ 0.43
Trim47-202ENSMUST00000106441 Olfr985Q8VGB4 311 aa17.74■□□□□ 0.43
Trim47-202ENSMUST00000106441 Ptov1Q91VU8 416 aa17.74■□□□□ 0.43
Trim47-202ENSMUST00000106441 Pcdhgb2Q91XX7 928 aa17.74■□□□□ 0.43
Trim47-202ENSMUST00000106441 Tmeff2Q9QYM9 374 aa17.74■□□□□ 0.43
Trim47-202ENSMUST00000106441 Igkv5-39A0A0G2JDV4 115 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Nccrp1G3X9C2 266 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Vmn2r8L7N472 848 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 PbsnO08976 174 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Sod3O09164 251 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Cldn4O35054 210 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Cyp1a1P00184 524 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Surf2P09926 257 aaKnown RBP17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Znf703P0CL69 594 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 TfamP40630 243 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Samd12Q0VE29 161 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Naf1Q3UMQ8 489 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Gm853Q3UNZ2 425 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Srek1ip1Q4V9W2 153 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Fgfr3Q61851 801 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Znf513Q6PD29 541 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Ccdc85bQ6PDY0 202 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Tmem270Q6UJB9 264 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Nuak2Q8BZN4 639 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Vmn1r18Q8R2C8 299 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Lrrc3bQ8VCH9 259 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Syt17Q920M7 470 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Mlf2Q99KX1 247 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Trim12aQ99PQ1 284 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 NepnQ9CQ76 512 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Ndufv2Q9D6J6 248 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 GabarapQ9DCD6 117 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Sgk2Q9QZS5 367 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Jbts17Q8CE72 3214 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Smurf2A2A5Z6 748 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Faap100A2ACJ2 879 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Rhbdl2A2AGA4 302 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Olfr1006A2ALD2 312 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Cbx4O55187 551 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 HmbsP22907 361 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Htr7P32304 448 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 NfycP70353 335 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 TekQ02858 1122 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Tstd2Q3U269 495 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Krtcap2Q5RL79 136 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Tusc1Q673H1 205 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 HjurpQ6PG16 667 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Ranbp10Q6VN19 620 aaKnown RBP17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Prss50Q8BLH5 439 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 BpifcQ8C186 509 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 MmaaQ8C7H1 415 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Kctd2Q8CEZ0 266 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Man2c1Q91W89 1039 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Depdc7Q91WS7 511 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Far1Q922J9 515 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Exoc2Q9D4H1 924 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 TrirQ9D735 173 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Kcne5Q9QZ26 143 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Rps6kb2Q9Z1M4 485 aa17.73■□□□□ 0.43
Trim47-202ENSMUST00000106441 Sppl2cA2A6C4 690 aa17.72■□□□□ 0.43
Trim47-202ENSMUST00000106441 Dcpp2E9PYC2 171 aa17.72■□□□□ 0.43
Trim47-202ENSMUST00000106441 Vmn2r35E9Q7U8 861 aa17.72■□□□□ 0.43
Trim47-202ENSMUST00000106441 Dcpp1L7N1X9 171 aa17.72■□□□□ 0.43
Trim47-202ENSMUST00000106441 Gm3488M0QW81 238 aa17.72■□□□□ 0.43
Trim47-202ENSMUST00000106441 HgdO09173 445 aa17.72■□□□□ 0.43
Trim47-202ENSMUST00000106441 P06324 132 aa17.72■□□□□ 0.43
Trim47-202ENSMUST00000106441 Bmp8aP34821 399 aa17.72■□□□□ 0.43
Trim47-202ENSMUST00000106441 Nr5a2P45448 560 aa17.72■□□□□ 0.43
Trim47-202ENSMUST00000106441 Angptl1Q640P2 490 aa17.72■□□□□ 0.43
Trim47-202ENSMUST00000106441 Paqr3Q6TCG8 311 aa17.72■□□□□ 0.43
Trim47-202ENSMUST00000106441 Scn4bQ7M729 228 aa17.72■□□□□ 0.43
Trim47-202ENSMUST00000106441 Trim36Q80WG7 729 aa17.72■□□□□ 0.43
Trim47-202ENSMUST00000106441 Vac14Q80WQ2 782 aa17.72■□□□□ 0.43
Trim47-202ENSMUST00000106441 Rspry1Q8BVR6 576 aa17.72■□□□□ 0.43
Trim47-202ENSMUST00000106441 Tmem62Q8BXJ9 643 aa17.72■□□□□ 0.43
Trim47-202ENSMUST00000106441 Slc49a3Q8CE47 516 aa17.72■□□□□ 0.43
Trim47-202ENSMUST00000106441 Mrpl38Q8K2M0 380 aa17.72■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms