RNA–Protein interactions for RNA: ENSMUST00000061209.6

Ccdc71-201, Transcript of Coiled-coil domain-containing protein 71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc71, Length 3,092 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71-201ENSMUST00000061209 Q8C3I9 435 aa12.56□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Vps37aQ8CHS8 397 aa12.56□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Hmgcs1Q8JZK9 520 aa12.56□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Eif3lQ8QZY1 564 aaKnown RBP12.56□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Scd3Q99PL7 359 aa12.56□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Rex1bdQ9CYZ6 169 aa12.56□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Paip2Q9D6V8 124 aa12.56□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Tgm1Q9JLF6 815 aa12.56□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Dmxl1Q6PNC0 3013 aa12.56□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Gm33543A0A1B0GSI5 81 aa12.56□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Gm6619F6URP1 175 aa12.56□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Gm3542K7N6U2 270 aa12.56□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 MrasO08989 208 aa12.56□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 C2P21180 760 aa12.56□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Emx2Q04744 253 aa12.56□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Q3U7U4 132 aa12.56□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Dennd5aQ6PAL8 1287 aa12.56□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Kcng4Q80XM3 506 aa12.56□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Gm9881Q8BR56 211 aa12.56□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 PreplQ8C167 725 aa12.56□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Noxo1Q8VCM2 349 aa12.56□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Wdr5bQ9D7H2 328 aa12.56□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Marveld3Q9D956 376 aa12.56□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Vps29Q9QZ88 182 aa12.56□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Dlgap4B1AZP2 992 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Ikzf3O08900 507 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Casp8O89110 480 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Clec2lP0C7M9 211 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Pld2P97813 933 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Nol9Q3TZX8 714 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 GmncQ3URY2 333 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Hist2h2acQ64523 129 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Hist2h2aa1Q6GSS7 130 aaKnown RBP12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 D3Ertd751eQ8BGN2 192 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Stx5Q8K1E0 355 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Ddx52Q8K301 598 aaKnown RBP12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Bud23Q9CY21 281 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 NpvfQ9ESQ8 188 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Dmrt1Q9QZ59 374 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 VapaQ9WV55 249 aaKnown RBP12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Mbd4Q9Z2D7 554 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Gm3952A0A0A6YXJ1 191 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 TomtA1Y9I9 258 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Zbed6D2EAC2 980 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Zfp395E9Q5N9 508 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 EnamO55196 1274 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Best1O88870 551 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 AlplP09242 524 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Kpnb1P70168 876 aaKnown RBP12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Micall2Q3TN34 1009 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Garem1Q3UFT3 876 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Hipk4Q3V016 616 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Sema3gQ4LFA9 780 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Osbp2Q5QNQ6 908 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 RflnbQ5SVD0 216 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Usp7Q6A4J8 1103 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Tspan12Q8BKT6 305 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Asrgl1Q8C0M9 326 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Zhx3Q8C0Q2 951 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Olfr850Q8VFF2 315 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Olfr394Q8VGR5 310 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Olfr570Q8VH12 312 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Rnf144aQ925F3 292 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 MtapQ9CQ65 283 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Il22bQ9JJY8 179 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Sae1Q9R1T2 350 aa12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Keap1Q9Z2X8 624 aaKnown RBP12.55□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 MgaA2AWL7 3003 aaKnown RBP12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Gm43796A0A0J9YV32 372 aa12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Lgr4A2ARI4 951 aa12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 3110082J24RikF6Z6Z2 108 aa12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Polr2jO08740 117 aaKnown RBP12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 NumblO08919 604 aa12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Tmco2P0C1V4 183 aa12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 GsnP13020 780 aa12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Polr2cP97760 275 aa12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Wbp1P97764 304 aa12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Hoxc4Q08624 264 aa12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 DgkbQ6NS52 802 aa12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Fbxl3Q8C4V4 428 aa12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 CntrobQ8CB62 887 aa12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Rab43Q8CG50 210 aa12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Samd14Q8K070 417 aa12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Ugt2b34Q8K154 532 aa12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Ly6g6eQ8K1T6 166 aa12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Agr3Q8R3W7 165 aa12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Olfr1278Q8VF39 313 aa12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Olfr347Q8VGK2 312 aa12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Tm9sf3Q9ET30 587 aa12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Spag4Q9JJF2 443 aa12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Olfr1508Q9R0K4 310 aa12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Cacna1hO88427 2365 aa12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Gm29797A0A140LIA7 188 aa12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Ccdc163A2AGD7 326 aa12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Pgbd5D3YZI9 523 aa12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Gm20403G3UYB0 123 aa12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Vmn2r97K7N6Z2 861 aa12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Vmn2r93L7N1Z9 857 aa12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Angpt1O08538 498 aa12.54□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 Aif1O70200 147 aa12.54□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 76.3 ms