RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Capn10Q9ESK3 666 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Hapln2Q9ESM3 341 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Fbxo16Q9QZM9 334 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Orc6Q9WUJ8 262 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Cyp2g1Q9WV19 494 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Creb3l1Q9Z125 519 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Gm3604A0A087WPN2 559 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Cfap77A0A087WRI3 283 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Gm30302A0A1Y7VN40 1110 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Apol11bE9PUZ0 337 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 RbpjlO08674 515 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Cops4O88544 406 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 GzmcP08882 248 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Dpep1P31428 410 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Sap25Q1EHW4 186 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Treml4Q3LRV9 263 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Ttf1Q62187 859 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Cep78Q6IRU7 790 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 BC061212Q6P8K3 481 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Tfap2eQ6VUP9 442 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Dnajc15Q78YY6 149 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Tas2r106Q7M724 308 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 A730061H03RikQ8BGD2 154 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Susd6Q8BGE4 302 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Tmem127Q8BGP5 238 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 B430218F22RikQ8BQR5 223 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Stk-ps2Q8C0V7 499 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Acat2Q8CAY6 397 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Ugt2b1Q8R084 529 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Sirt3Q8R104 334 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Fam20bQ8VCS3 409 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Olfr812Q8VG64 310 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Cdca5Q9CPY3 264 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 GmfbQ9CQI3 142 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 D10Jhu81eQ9D172 266 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Pus10Q9D3U0 527 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Cpne6Q9Z140 557 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 SisF8VQM5 1818 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Gm13276A0A087WR18 182 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Ect2lA0A140LIP2 953 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Olfr1006A2ALD2 312 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Adam34A2RSG8 714 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Zscan5bB2RTN3 468 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Rpl3lE9PWZ3 407 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Gm14496K7N5U4 849 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Gm10324L7N208 604 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Oaz2O08608 189 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Bard1O70445 765 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Fosl2P47930 326 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Slc11a2P49282 568 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Hrh3P58406 445 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 SelpQ01102 768 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Kcnh6Q32ME0 950 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Abraxas2Q3TCJ1 415 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Gm1527Q3V0P3 650 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 VclQ64727 1066 aaKnown RBP8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 ErfeQ6PGN1 340 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Dpy19l3Q71B07 716 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Scn3bQ8BHK2 215 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Acot4Q8BWN8 421 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Fmo9Q8C116 539 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Pdcd2lQ8C5N5 364 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Prmt5Q8CIG8 637 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Mrpl48Q8JZS9 211 aaKnown RBP8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Clec4a3Q8JZX6 237 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Kcnc4Q8R1C0 628 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Zdhhc12Q8VC90 267 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Olfr691Q8VGW5 322 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Pex16Q91XC9 336 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Pcdhac2Q91Y09 1006 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Pycr2Q922Q4 320 aaKnown RBP8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Rwdd2bQ99M03 290 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Desi1Q9CQT7 168 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Ptp4a3Q9D658 173 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Nipa2Q9JJC8 359 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 HaspinQ9Z0R0 754 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 PtprfA2A8L5 1898 aa8.04□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Ank3G5E8K5 1961 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Pramef20B1ARV6 477 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Gabrr3B2RXA8 464 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Srp54bE9PXC0 504 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Vmn2r91E9Q2U5 856 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Itga10E9Q6R1 1167 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 E2f3O35261 457 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Prss39O70169 367 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 EgfP01132 1217 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Srp54P14576 504 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Ifngr1P15261 477 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Sox2P48432 319 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Sesn1P58006 492 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Tm9sf2P58021 662 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Cxcr5Q04683 374 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 HgsnatQ3UDW8 656 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Fzd6Q61089 709 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Hsd3b5Q61694 373 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Snx6Q6P8X1 406 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Ugt2a2Q6PDD0 528 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 EnkurQ6SP97 255 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Tmed3Q78IS1 221 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Arhgap11aQ80Y19 987 aa8.03□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms