RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 CacybpQ9CXW3 229 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Fndc8Q9D2H8 321 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Fam162aQ9D6U8 155 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Rrp8Q9DB85 457 aaKnown RBP8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Olfr705Q9EPF7 316 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Il22bQ9JJY8 179 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Gm33543A0A1B0GSI5 81 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 A0A286YCH8 300 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 3110040M04RikA0A286YDK0 300 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 A0A286YE43 300 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Wdr76A6PWY4 622 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Dlgap4B1AZP2 992 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 RerglB2RVE2 204 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Ikzf3O08900 507 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Tssk2O54863 358 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Gli1P47806 1111 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Psme3P61290 254 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Emx2Q04744 253 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Hif3aQ0VBL6 662 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Gm527Q4KL13 310 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Hist2h2acQ64523 129 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Usp7Q6A4J8 1103 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Hist2h2aa1Q6GSS7 130 aaKnown RBP8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Klhdc10Q6PAR0 439 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Rtp2Q80ZI2 223 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 GanabQ8BHN3 944 aaKnown RBP8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Cars2Q8BYM8 551 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Q8C3W1 322 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Grhl2Q8K5C0 625 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 McatQ8R3F5 381 aaKnown RBP8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Med25Q8VCB2 745 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Olfr570Q8VH12 312 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 CygbQ9CX80 190 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Pnp2Q9D8C9 305 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Stx12Q9ER00 274 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 St6galnac1Q9QZ39 526 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Sae1Q9R1T2 350 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 PtsQ9R1Z7 144 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 VapaQ9WV55 249 aaKnown RBP8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Cyp4a32A2A8T1 509 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Chst13D3Z6E3 336 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Olfr220E9Q050 325 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 BC051665E9Q623 330 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Gm6619F6URP1 175 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Zfp607bG3X9H3 648 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Gm3248K7N721 186 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Srsf5O35326 269 aaKnown RBP8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Igkv7-33P01632 114 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 NelfeP19426 375 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 M6prP24668 278 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Stmn2P55821 179 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Fmo5P97872 533 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Yipf3Q3UDR8 347 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Mapkapk3Q3UMW7 384 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Gm5431Q5NCB3 844 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Fam71bQ5STT6 665 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Rnf145Q5SWK7 663 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Tbx10Q810F8 385 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Olfr1278Q8VF39 313 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Lypd3Q91YK8 363 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Slc52a3Q9D6X5 460 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Vps29Q9QZ88 182 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Zbtb18Q9WUK6 522 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Wdr90Q6ZPG2 1874 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Dock8Q8C147 2100 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Igkv6-20A0A140T8P2 115 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Zbed6D2EAC2 980 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Vmn2r97K7N6Z2 861 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Vmn2r93L7N1Z9 857 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 TpmtO55060 240 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Aif1O70200 147 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Hdgfl2Q3UMU9 669 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Olfr1085Q7TR64 313 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Actr5Q80US4 605 aaKnown RBP8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Kcng4Q80XM3 506 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Pced1bQ8BGX1 433 aaKnown RBP8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 CntrobQ8CB62 887 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Noxo1Q8VCM2 349 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Olfr850Q8VFF2 315 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Dhx36Q8VHK9 1001 aaKnown RBP8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Vps11Q91W86 941 aaKnown RBP8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Tmed5Q9CXE7 229 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Bud23Q9CY21 281 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Atp5dQ9D3D9 168 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Slc25a27Q9D6D0 322 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Prl8a6Q9DAY2 240 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Csnk1eQ9JMK2 416 aaKnown RBP8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Olfr1508Q9R0K4 310 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Zfp938E9Q9G3 579 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 KapP61110 121 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Cuzd1P70412 606 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 NrtnP97463 195 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 CrtamQ149L7 389 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Tmem102Q3UPR7 509 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Q810N5 247 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Pp2d1Q8BVT6 620 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Lats1Q8BYR2 1129 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Trim35Q8C006 501 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Slc46a2Q8CA03 479 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 C1rbQ8CFG9 706 aa8.38□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 34 ms