RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 2010300C02RikE9Q3M9 1175 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Nme6O88425 189 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 MtpnP62774 118 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Grik5Q61626 979 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Cacnb2Q8CC27 655 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Zdhhc1Q8R0N9 484 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Rai2Q9QVY8 529 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Csf1P07141 552 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Ephx2P34914 554 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Btg3P50615 252 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 GstcdQ5RL51 634 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Sp8Q8BMJ8 486 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 SdslQ8R238 329 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Cyp2a22B2RXZ2 492 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Cfl1P18760 166 aaKnown RBP16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Sox2P48432 319 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Tmem69Q3KQJ0 245 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Coq8bQ566J8 533 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Fbxw11Q5SRY7 542 aaKnown RBP16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Phf11aQ8BVM9 293 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Tmem150cQ8C8S3 249 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Acat2Q8CAY6 397 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 MfrpQ8K480 584 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Vmn2r18E9Q280 788 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Olfr1121L7MTT1 314 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 TroapB7ZNG4 668 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Sult3a2G5E904 293 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 NagluO88325 739 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Fscn2Q32M02 492 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 MkxQ8BIA3 353 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Cox15Q8BJ03 413 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 MepceQ8K3A9 666 aaKnown RBP16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Tcf25Q8R3L2 676 aaKnown RBP16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Dnajc24Q91ZF0 196 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Smurf1Q9CUN6 731 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 9030624G23RikQ9D308 155 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Yipf7Q9JIM5 254 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 NmuQ9QXK8 174 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Dbx2F8VQH7 377 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Slc6a20bO88575 635 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Eif1aQ60872 144 aaKnown RBP16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Pan3Q640Q5 837 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Eif1axQ8BMJ3 144 aaKnown RBP16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Slc6a20aQ8VDB9 592 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Dyrk3Q922Y0 586 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Tor1bQ9ER41 336 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Znhit2Q9QY66 399 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Tp53bp1P70399 1969 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 B020004C17RikJ3QP07 232 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Slc22a8O88909 537 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Ctbp2P56546 445 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Padi2Q08642 673 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 EdnraQ61614 427 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Hsfy2Q80Y37 392 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Hacd2Q9D3B1 254 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 CtsrQ9JIA9 334 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Gm5493S4R2D1 92 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Cyp1a1P00184 524 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Hdac2P70288 488 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 GnrhrQ01776 327 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 MertkQ60805 994 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Nomo1Q6GQT9 1214 aaKnown RBP16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Fam205cQ80YD3 371 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Nop16Q9CPT5 178 aaKnown RBP16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Chp2Q9D869 196 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Trpm3Q5F4S9 1721 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Olfr1164A2AVT5 326 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Cldn24D3YXJ9 220 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Top6blJ3QMY9 579 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Slc16a3P57787 470 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Tex46Q9CPU3 165 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Agpat5Q9D1E8 365 aa16.17■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Vmn2r54K7N649 806 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Znf143O70230 638 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Tie1Q06806 1134 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 CilpQ66K08 1184 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Eci3Q78JN3 317 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Hsdl1Q8BTX9 330 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Fads1Q920L1 447 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Cd2P08920 344 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 OxtrP97926 388 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Spink5Q148R4 1017 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Slc6a7Q6PGE7 637 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Fastkd3Q8BSN9 661 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Kcnk3O35111 409 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 H2-ObO35424 271 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 CcnkO88874 554 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 EgfP01132 1217 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 FpgsP48760 587 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Acta2P62737 377 aaKnown RBP16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Actg2P63268 376 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 B3gnt4Q1RLK6 350 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Vamp1Q62442 118 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Agpat3Q9D517 376 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Rpl4Q9D8E6 419 aaKnown RBP16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Slc39a1Q9QZ03 324 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Gabarapl2P60521 117 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Yes1Q04736 541 aaKnown RBP16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Sox4Q06831 440 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 PhykplQ8R1K4 467 aa16.16■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 40.8 ms