RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Olfr1122Q8VGT9 326 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Ptgr1Q91YR9 329 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Clstn3Q99JH7 956 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 AdprmQ99KS6 340 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 4930578G10RikQ9D4Q4 153 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Isca2Q9DCB8 154 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Slc7a9Q9QXA6 487 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Tnrc6cQ3UHC0 1690 aaKnown RBP10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Mical3Q8CJ19 1993 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Chrna10B2RX82 447 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 FgrP14234 517 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Fgl1Q71KU9 314 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Tigd3Q7TM95 470 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 McubQ810S1 345 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Map4k5Q8BPM2 847 aaKnown RBP10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Plekhs1Q8BW88 474 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Zcchc9Q8R1J3 271 aaKnown RBP10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 MvdQ99JF5 401 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Ddx50Q99MJ9 734 aaKnown RBP10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Zswim1Q9CWV7 455 aaKnown RBP10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Wdr83Q9DAJ4 315 aaKnown RBP10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 KelQ9EQF2 713 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Slc29a1Q9JIM1 460 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 CerklA2AQH1 525 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Fkbp8O35465 402 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 TpmtO55060 240 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Il6raP22272 460 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 CntfP51642 198 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Hrh2P97292 397 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 SirpaP97797 513 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 BcheQ03311 603 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Abraxas2Q3TCJ1 415 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Q8BHG2 160 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Zfp101Q8BP18 612 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Sumf2Q8BPG6 308 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 E330021D16RikQ8BW45 371 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Clrn1Q8K445 232 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Eml3Q8VC03 897 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Olfr1361Q8VFH0 317 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Olfr599Q8VG01 315 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Ncbp2Q9CQ49 156 aaKnown RBP10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Yae1d1Q9DAY6 216 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Osbpl3Q9DBS9 855 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Nacc2Q9DCM7 586 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm5538W4VSP6 401 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Atrnl1Q6A051 1378 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Olfr1153A2AVC0 318 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Tceal7A3KGA4 98 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Fam71f2B2RXB0 297 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Vmn1r55E9Q8I6 310 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Sypl1O09117 261 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Prl4a1O35256 227 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Cdk5r2O35926 369 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Itm2bO89051 266 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 H2-Q7P14429 334 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 H2-Q9P14431 200 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Matn1P51942 500 aaKnown RBP10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Spire1Q52KF3 598 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Mylk4Q5SUV5 386 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 MertkQ60805 994 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Akt2Q60823 481 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Rbbp4Q60972 425 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Trappc6aQ78XR0 159 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Amer2Q8CCJ4 672 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Irak2Q8CFA1 622 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 C1raQ8CG16 707 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Dcun1d3Q8K0V2 304 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 4933421I07RikQ9D420 214 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Epb41l4bQ9JMC8 527 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Dkk3Q9QUN9 349 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 PappaQ8R4K8 1624 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Daw1D3Z7A5 415 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Zbtb10E9Q8X5 861 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Adam19O35674 920 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Znf143O70230 638 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 AcadvlP50544 656 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Dcst1Q059Y8 732 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Olfr1288Q7TQY0 312 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Smyd4Q8BTK5 799 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Csnk1g3Q8C4X2 424 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Abhd11Q8K4F5 307 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 FlcnQ8QZS3 579 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Batf2Q8R1H8 277 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Olfr659Q8VGV6 322 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Rcbtb2Q99LJ7 551 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 PgcQ9D7R7 392 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Rsph9Q9D9V4 276 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Hcar2Q9EP66 360 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Nectin1Q9JKF6 515 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Coro1bQ9WUM3 484 aaKnown RBP10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Mtm1Q9Z2C5 603 aa10.01□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Rad51dO55230 329 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 DckP43346 260 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Nsg2P47759 171 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Csn1s2aQ02862 184 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Fam71bQ5STT6 665 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Fstl1Q62356 306 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Tmc6Q7TN60 810 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Olfr384Q7TRX8 312 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Jazf1Q80ZQ5 243 aa10□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms