RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Cpsf4Q8BQZ5 211 aaKnown RBP13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 Ubr7Q8BU04 425 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 GancQ8BVW0 898 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 Samd3Q8C4H2 520 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 Mfsd14bQ8CIA9 507 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 Cnot3Q8K0V4 751 aaKnown RBP13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 Ahi1Q8K3E5 1047 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 D8Ertd738eQ8R1F0 94 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 KptnQ8VCX6 430 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 Mrpl54Q9CPW3 135 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 Desi1Q9CQT7 168 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 Pbdc1Q9D0B6 198 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 Ccdc81Q9D5W4 654 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 Uba7Q9DBK7 977 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 Trpv4Q9EPK8 871 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 Aldh6a1Q9EQ20 535 aaKnown RBP13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 FancgQ9EQR6 623 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 Krt81Q9ERE2 481 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 Il21Q9ES17 146 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 Trip4Q9QXN3 581 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 Vnn3Q9QZ25 500 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 Kat6aQ8BZ21 2003 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 Mrgpra2aA0A0R4J1Z0 331 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 Veph1A1A535 833 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 Izumo4D3Z690 227 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 Olfr564E9PWA8 316 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 Vmn2r94E9PZK8 818 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 Gm8334F7CD45 553 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 Vmn2r3H3BJ88 915 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 Gm21800J3QMJ9 180 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 Ikzf3O08900 507 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 Il1aP01582 270 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 H2-AaP01910 256 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 Gon7P0C8B4 98 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 Lire1P11260 357 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 Zfp37P17141 594 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 CratP47934 626 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 Alox5P48999 674 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 Flt3lgP49772 232 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 Fbxw18Q3TSA9 469 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 Smu1Q3UKJ7 513 aaKnown RBP13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 Gm10696Q3UTC4 357 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 Runx1t1Q61909 577 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 Snx6Q6P8X1 406 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 Il20raQ6PHB0 546 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 Olfr213Q7TS32 327 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 Thnsl2Q80W22 483 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 Tmem169Q8BG50 297 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 Wdr47Q8CGF6 920 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 PolbQ8K409 335 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 HopxQ8R1H0 73 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 Olfr1208Q8VG47 308 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 Slc2a10Q8VHD6 536 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 Ap3m1Q9JKC8 418 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 Adam25Q9R159 760 aa13.02□□□□□ -0.33
Nup88-201ENSMUST00000035283 Fbxo47A2A6H3 451 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Rdh8D3Z6W3 317 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Tuba1bP05213 451 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Fkbp14P59024 211 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 AbatP61922 500 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Tuba1aP68369 451 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Hp1bp3Q3TEA8 554 aaKnown RBP13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Itga7Q61738 1179 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Zfp90Q61967 636 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 St8sia4Q64692 359 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Cep78Q6IRU7 790 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Slc39a10Q6P5F6 833 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 BC061212Q6P8K3 481 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Ugt2a2Q6PDD0 528 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Mfsd13aQ6PDE8 519 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Cpeb2Q812E0 521 aaKnown RBP13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Q8BH50 245 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Clrn3Q8BHH8 226 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Fam131aQ8BWU3 361 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Sh3rf2Q8BZT2 735 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Gpat3Q8C0N2 438 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Vmn1r188Q8K3N2 308 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Gpr37l1Q99JG2 481 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Col25a1Q99MQ5 666 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Acbd7Q9D258 88 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Aar2Q9D2V5 384 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 5530400C23RikQ9D3I0 173 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Wwp2Q9DBH0 870 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Mettl15Q9DCL4 406 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Nek6Q9ES70 313 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Pdzk1Q9JIL4 519 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Vwa8Q8CC88 1905 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Zfp626A0A0U1RQ84 676 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Gm21885A0A286YDN8 145 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Vmn2r118E9Q1C1 853 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Gm4775F7ANJ3 135 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Coro1aO89053 461 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Sp1O89090 784 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 TecP24604 630 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Klrb1cP27814 223 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Rab23P35288 237 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Aldh2P47738 519 aaKnown RBP13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 CtskP55097 329 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Gfi1P70338 423 aa13.01□□□□□ -0.33
Nup88-201ENSMUST00000035283 Nt5c3bQ3UFY7 300 aa13.01□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 37.5 ms