RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Fam20bQ8VCS3 409 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Olfr677Q8VF06 312 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Gemin6Q9CX53 166 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Rpn2Q9DBG6 631 aaKnown RBP15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Fam13cQ9DBR2 601 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Nufip1Q9QXX8 484 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Igkv12-98A0A0G2JGF9 115 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Gm6592A2AHC7 168 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Tmem236A2ARJ3 344 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Btnl6A2CG22 539 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Tsc22d2E9Q7M2 769 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Tmem265E9Q8G3 109 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 TertO70372 1122 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Cpa3P15089 417 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Htr7P32304 448 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Rps14P62264 151 aaKnown RBP15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Cd244Q07763 397 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Ermp1Q3UVK0 898 aaKnown RBP15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Hist2h2acQ64523 129 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Phf24Q80TL4 400 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Slc6a15Q8BG16 729 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Zc2hc1cQ8CCG1 527 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Ca12Q8CI85 354 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Ntmt1Q8R2U4 223 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Q9CPZ3 230 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Tex47Q9D5W8 253 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Q9DAD0 168 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Uba7Q9DBK7 977 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Tcf7l1Q9Z1J1 584 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Kcnj8P97794 424 aa15.91■□□□□ 0.14
Shh-201ENSMUST00000002708 Aldh16a1Q571I9 802 aa15.91■□□□□ 0.14
Shh-201ENSMUST00000002708 Nr1d2Q60674 576 aa15.91■□□□□ 0.14
Shh-201ENSMUST00000002708 Sdr16c5Q7TQA3 309 aa15.91■□□□□ 0.14
Shh-201ENSMUST00000002708 Gpc2Q8BKV1 579 aa15.91■□□□□ 0.14
Shh-201ENSMUST00000002708 Cnksr3Q8BMA3 555 aa15.91■□□□□ 0.14
Shh-201ENSMUST00000002708 Tmem125Q8CHQ6 216 aa15.91■□□□□ 0.14
Shh-201ENSMUST00000002708 B3gnt7Q8K0J2 397 aa15.91■□□□□ 0.14
Shh-201ENSMUST00000002708 Olfr437Q8VEV1 310 aa15.91■□□□□ 0.14
Shh-201ENSMUST00000002708 Fabp12Q9DAK4 132 aa15.91■□□□□ 0.14
Shh-201ENSMUST00000002708 Olfr704Q9EPF6 315 aa15.91■□□□□ 0.14
Shh-201ENSMUST00000002708 PalmdQ9JHU2 551 aa15.91■□□□□ 0.14
Shh-201ENSMUST00000002708 Arl6O88848 186 aa15.91■□□□□ 0.14
Shh-201ENSMUST00000002708 P01648 108 aa15.91■□□□□ 0.14
Shh-201ENSMUST00000002708 Csf2rbP26955 896 aa15.91■□□□□ 0.14
Shh-201ENSMUST00000002708 Ptger4P32240 513 aa15.91■□□□□ 0.14
Shh-201ENSMUST00000002708 Padi2Q08642 673 aa15.91■□□□□ 0.14
Shh-201ENSMUST00000002708 Nt5c3bQ3UFY7 300 aa15.91■□□□□ 0.14
Shh-201ENSMUST00000002708 Nudcd1Q6PIP5 582 aa15.91■□□□□ 0.14
Shh-201ENSMUST00000002708 Nrde2Q80XC6 1172 aa15.91■□□□□ 0.14
Shh-201ENSMUST00000002708 Rbbp8Q80YR6 893 aa15.91■□□□□ 0.14
Shh-201ENSMUST00000002708 Ppp1r15bQ8BFW3 697 aa15.91■□□□□ 0.14
Shh-201ENSMUST00000002708 Tmem184bQ8BG09 407 aa15.91■□□□□ 0.14
Shh-201ENSMUST00000002708 Slc8b1Q925Q3 585 aa15.91■□□□□ 0.14
Shh-201ENSMUST00000002708 Itgb3bpQ9CQ82 176 aa15.91■□□□□ 0.14
Shh-201ENSMUST00000002708 MispQ9D279 648 aa15.91■□□□□ 0.14
Shh-201ENSMUST00000002708 1700034I23RikQ9D9Q3 184 aa15.91■□□□□ 0.14
Shh-201ENSMUST00000002708 Xrn2Q9DBR1 951 aaKnown RBP15.91■□□□□ 0.14
Shh-201ENSMUST00000002708 Capn10Q9ESK3 666 aa15.91■□□□□ 0.14
Shh-201ENSMUST00000002708 Clca3a1Q9QX15 902 aa15.91■□□□□ 0.14
Shh-201ENSMUST00000002708 Pld1Q9Z280 1074 aa15.91■□□□□ 0.14
Shh-201ENSMUST00000002708 Ralgps1A2AR50 585 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Zfp738B8JJX8 793 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Vmn2r115E9Q0E7 857 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Gm10324L7N208 604 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Kpna4O35343 521 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Hipk1O88904 1210 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Slc16a1P53986 493 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Xrra1Q3U3V8 786 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Zfp868Q3UTQ6 422 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 MagixQ4KL35 324 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Olfr169Q7TS53 313 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Hyal5Q812F3 526 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Plekhn1Q8C886 359 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 HnrnpllQ921F4 591 aaKnown RBP15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Uqcc2Q9CQY6 136 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 NarfQ9CYQ7 462 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Slc7a9Q9QXA6 487 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Baz2aQ91YE5 1889 aaKnown RBP15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Zfp964B2RR88 472 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Fam71f2B2RXB0 297 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Ctla2bP12400 113 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Wnt6P22727 364 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Ccr7P47774 378 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Cct7P80313 544 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Ap5b1Q3TAP4 876 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Ephx3Q3V1F8 367 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 HecaQ3V1N5 544 aaKnown RBP15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Cpsf4Q8BQZ5 211 aaKnown RBP15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Thap1Q8CHW1 210 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Ccdc92Q8VDN4 314 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Olfr447Q8VGP6 310 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 ApofQ91V80 315 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Q99LU8 229 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Rhobtb1Q9DAK3 695 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Smim23Q9DAL0 136 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Mybpc3O70468 1270 aaKnown RBP15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Stfa3P35173 103 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Stat6P52633 837 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Pdss2Q33DR3 401 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Spata6Q3U6K5 488 aa15.9■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 48.2 ms