RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 RBBP7Q16576 425 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 ZXDCQ2QGD7 858 aaPredicted RBP9.05□□□□□ -0.96
PHGDH-228ENST00000641847 PTCHD3Q3KNS1 767 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 LACTB2Q53H82 288 aaPredicted RBP9.05□□□□□ -0.96
PHGDH-228ENST00000641847 PRAMEF13Q5VWM6 474 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 CES4AQ5XG92 561 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 CAPN13Q6MZZ7 669 aaPredicted RBP9.05□□□□□ -0.96
PHGDH-228ENST00000641847 GTF2H2CQ6P1K8 395 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 TMEM26Q6ZUK4 368 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 FRMD7Q6ZUT3 714 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 RPS27LQ71UM5 84 aaKnown RBP9.05□□□□□ -0.96
PHGDH-228ENST00000641847 B3GNT8Q7Z7M8 397 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 AMIGO1Q86WK6 493 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 DTX1Q86Y01 620 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 HOMEZQ8IX15 550 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 LRRC56Q8IYG6 542 aaPredicted RBP9.05□□□□□ -0.96
PHGDH-228ENST00000641847 TEX9Q8N6V9 391 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 EFCAB3Q8N7B9 438 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 SNX31Q8N9S9 440 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 LINC01555Q8NAE3 123 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 OR2L8Q8NGY9 312 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 OR56A3Q8NH54 315 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 PPP4R1Q8TF05 950 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 ZNF483Q8TF39 744 aaPredicted RBP9.05□□□□□ -0.96
PHGDH-228ENST00000641847 ZFPM2Q8WW38 1151 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 ZNF75CPQ92670 426 aaPredicted RBP9.05□□□□□ -0.96
PHGDH-228ENST00000641847 USP7Q93009 1102 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 MIB2Q96AX9 1013 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 PYCR2Q96C36 320 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 MOCOSQ96EN8 888 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 NSUN5Q96P11 429 aaKnown RBP9.05□□□□□ -0.96
PHGDH-228ENST00000641847 SLC38A3Q99624 504 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 TBC1D10AQ9BXI6 508 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 CAPS2Q9BXY5 557 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 SRMSQ9H3Y6 488 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 UCK1Q9HA47 277 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 RYDENQ9NUL5 291 aaKnown RBP9.05□□□□□ -0.96
PHGDH-228ENST00000641847 ABCF3Q9NUQ8 709 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 DNAJC11Q9NVH1 559 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 OPTCQ9UBM4 332 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 ANGPTL3Q9Y5C1 460 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 RNF215Q9Y6U7 377 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 CSMD1Q96PZ7 3565 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 LILRA5A6NI73 299 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 RHPN2P1A8MT19 583 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 E7ENX8 843 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 KLF11O14901 512 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 PPM1DO15297 605 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 LYPLA1O75608 230 aaPredicted RBP9.04□□□□□ -0.96
PHGDH-228ENST00000641847 CHRNGP07510 517 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 TSPAN8P19075 237 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 CCND1P24385 295 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 PEBP1P30086 187 aaKnown RBP9.04□□□□□ -0.96
PHGDH-228ENST00000641847 ARRB2P32121 409 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 SERPINB5P36952 375 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 PIK3CGP48736 1102 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 CDH13P55290 713 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 ABCE1P61221 599 aaKnown RBP9.04□□□□□ -0.96
PHGDH-228ENST00000641847 GNGT1P63211 74 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 CCL7P80098 99 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 TAP2Q03519 686 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 CLCQ05315 142 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 LCP2Q13094 533 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 STX3Q13277 289 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 RCN2Q14257 317 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 THEMIS2Q5TEJ8 643 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 ATG16L1Q676U5 607 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 METTL2BQ6P1Q9 378 aaKnown RBP9.04□□□□□ -0.96
PHGDH-228ENST00000641847 SUSD1Q6UWL2 747 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 RGS9BPQ6ZS82 235 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 GOLGA7Q7Z5G4 137 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 THOC6Q86W42 341 aaKnown RBP9.04□□□□□ -0.96
PHGDH-228ENST00000641847 TEX19Q8NA77 164 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 OR4E2Q8NGC2 313 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 OR6Y1Q8NGX8 325 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 OR10G6Q8NH81 332 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 HMGCLL1Q8TB92 370 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 TRPC4APQ8TEL6 797 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 SMPDL3AQ92484 453 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 CCDC74AQ96AQ1 378 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 SH3KBP1Q96B97 665 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 OR4K3Q96R72 315 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 SGPP1Q9BX95 441 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.04□□□□□ -0.96
PHGDH-228ENST00000641847 DRC3Q9H069 523 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 LRRN3Q9H3W5 708 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 CCDC134Q9H6E4 229 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 CUEDC1Q9NWM3 386 aaPredicted RBP9.04□□□□□ -0.96
PHGDH-228ENST00000641847 OR6C2Q9NZP2 312 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 SLC22A14Q9Y267 594 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 OTOGQ6ZRI0 2925 aa9.04□□□□□ -0.96
PHGDH-228ENST00000641847 SETD2Q9BYW2 2564 aaPredicted RBP9.03□□□□□ -0.96
PHGDH-228ENST00000641847 A0A1W2PPV9 198 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 GSAPA4D1B5 854 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 OR6C74A6NCV1 312 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 TCP11X1B4DZS4 312 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.03□□□□□ -0.96
PHGDH-228ENST00000641847 BTN3A3O00478 584 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 OR7A17O14581 309 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 ZW10O43264 779 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms