RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 ICKQ9UPZ9 632 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 GPR45Q9Y5Y3 372 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 LOC400499M0QZD8 3231 aa12.63□□□□□ -0.39
PHGDH-221ENST00000641573 ABCA7Q8IZY2 2146 aa12.62□□□□□ -0.39
PHGDH-221ENST00000641573 TLR4O00206 839 aa12.62□□□□□ -0.39
PHGDH-221ENST00000641573 GYG2O15488 501 aa12.62□□□□□ -0.39
PHGDH-221ENST00000641573 RSL1D1O76021 490 aaKnown RBP12.62□□□□□ -0.39
PHGDH-221ENST00000641573 CELA2BP08218 269 aaPredicted RBP12.62□□□□□ -0.39
PHGDH-221ENST00000641573 CDH1P12830 882 aa12.62□□□□□ -0.39
PHGDH-221ENST00000641573 SLC2A4P14672 509 aa12.62□□□□□ -0.39
PHGDH-221ENST00000641573 NQO1P15559 274 aaKnown RBP12.62□□□□□ -0.39
PHGDH-221ENST00000641573 JUNDP17535 347 aa12.62□□□□□ -0.39
PHGDH-221ENST00000641573 SLC19A1P41440 591 aa12.62□□□□□ -0.39
PHGDH-221ENST00000641573 MRPL19P49406 292 aaKnown RBP12.62□□□□□ -0.39
PHGDH-221ENST00000641573 ACADVLP49748 655 aa12.62□□□□□ -0.39
PHGDH-221ENST00000641573 DIO3P55073 304 aa12.62□□□□□ -0.39
PHGDH-221ENST00000641573 NME5P56597 212 aa12.62□□□□□ -0.39
PHGDH-221ENST00000641573 MXRA7P84157 204 aa12.62□□□□□ -0.39
PHGDH-221ENST00000641573 LAPTM5Q13571 262 aa12.62□□□□□ -0.39
PHGDH-221ENST00000641573 CUL3Q13618 768 aa12.62□□□□□ -0.39
PHGDH-221ENST00000641573 MAPRE2Q15555 327 aa12.62□□□□□ -0.39
PHGDH-221ENST00000641573 HIST2H2ACQ16777 129 aaPredicted RBP12.62□□□□□ -0.39
PHGDH-221ENST00000641573 ZNF423Q2M1K9 1284 aa12.62□□□□□ -0.39
PHGDH-221ENST00000641573 SMU1Q2TAY7 513 aa12.62□□□□□ -0.39
PHGDH-221ENST00000641573 PDCD4Q53EL6 469 aaKnown RBP12.62□□□□□ -0.39
PHGDH-221ENST00000641573 PAGE2BQ5JRK9 111 aa12.62□□□□□ -0.39
PHGDH-221ENST00000641573 HIST2H2AA3Q6FI13 130 aa12.62□□□□□ -0.39
PHGDH-221ENST00000641573 MED27Q6P2C8 311 aa12.62□□□□□ -0.39
PHGDH-221ENST00000641573 PAOXQ6QHF9 649 aa12.62□□□□□ -0.39
PHGDH-221ENST00000641573 ARMCX6Q7L4S7 300 aa12.62□□□□□ -0.39
PHGDH-221ENST00000641573 TAF8Q7Z7C8 310 aa12.62□□□□□ -0.39
PHGDH-221ENST00000641573 C17orf64Q86WR6 236 aa12.62□□□□□ -0.39
PHGDH-221ENST00000641573 ZFAND4Q86XD8 727 aa12.62□□□□□ -0.39
PHGDH-221ENST00000641573 RBM15BQ8NDT2 890 aaKnown RBP12.62□□□□□ -0.39
PHGDH-221ENST00000641573 FBXO27Q8NI29 283 aa12.62□□□□□ -0.39
PHGDH-221ENST00000641573 REPS1Q96D71 796 aa12.62□□□□□ -0.39
PHGDH-221ENST00000641573 ACAT2Q9BWD1 397 aa12.62□□□□□ -0.39
PHGDH-221ENST00000641573 PELI2Q9HAT8 420 aa12.62□□□□□ -0.39
PHGDH-221ENST00000641573 SDR39U1Q9NRG7 319 aaPredicted RBP12.62□□□□□ -0.39
PHGDH-221ENST00000641573 GEMIN8Q9NWZ8 242 aaKnown RBP12.62□□□□□ -0.39
PHGDH-221ENST00000641573 TAS2R1Q9NYW7 299 aa12.62□□□□□ -0.39
PHGDH-221ENST00000641573 APOBEC3BQ9UH17 382 aaKnown RBP12.62□□□□□ -0.39
PHGDH-221ENST00000641573 PCDHGA11Q9Y5H2 935 aa12.62□□□□□ -0.39
PHGDH-221ENST00000641573 LRP4O75096 1905 aa12.62□□□□□ -0.39
PHGDH-221ENST00000641573 PIPSLA2A3N6 862 aa12.61□□□□□ -0.39
PHGDH-221ENST00000641573 SEC22BO75396 215 aa12.61□□□□□ -0.39
PHGDH-221ENST00000641573 CSF2P04141 144 aa12.61□□□□□ -0.39
PHGDH-221ENST00000641573 PCNAP12004 261 aa12.61□□□□□ -0.39
PHGDH-221ENST00000641573 PRPH2P23942 346 aa12.61□□□□□ -0.39
PHGDH-221ENST00000641573 PSMB5P28074 263 aa12.61□□□□□ -0.39
PHGDH-221ENST00000641573 RPL38P63173 70 aaKnown RBP12.61□□□□□ -0.39
PHGDH-221ENST00000641573 CSTF3Q12996 717 aaKnown RBP12.61□□□□□ -0.39
PHGDH-221ENST00000641573 GRIK2Q13002 908 aa12.61□□□□□ -0.39
PHGDH-221ENST00000641573 MAD2L1Q13257 205 aaPredicted RBP12.61□□□□□ -0.39
PHGDH-221ENST00000641573 C1orf61Q13536 156 aa12.61□□□□□ -0.39
PHGDH-221ENST00000641573 RFTN2Q52LD8 501 aaPredicted RBP12.61□□□□□ -0.39
PHGDH-221ENST00000641573 PRRT3Q5FWE3 981 aa12.61□□□□□ -0.39
PHGDH-221ENST00000641573 WDR45BQ5MNZ6 344 aa12.61□□□□□ -0.39
PHGDH-221ENST00000641573 IL23RQ5VWK5 629 aa12.61□□□□□ -0.39
PHGDH-221ENST00000641573 IYDQ6PHW0 289 aa12.61□□□□□ -0.39
PHGDH-221ENST00000641573 RNF175Q8N4F7 328 aa12.61□□□□□ -0.39
PHGDH-221ENST00000641573 OR7G3Q8NG95 312 aa12.61□□□□□ -0.39
PHGDH-221ENST00000641573 OR9I1Q8NGQ6 314 aa12.61□□□□□ -0.39
PHGDH-221ENST00000641573 C1orf216Q8TAB5 229 aa12.61□□□□□ -0.39
PHGDH-221ENST00000641573 JPH3Q8WXH2 748 aaPredicted RBP12.61□□□□□ -0.39
PHGDH-221ENST00000641573 DNASE2BQ8WZ79 361 aa12.61□□□□□ -0.39
PHGDH-221ENST00000641573 CMTM7Q96FZ5 175 aa12.61□□□□□ -0.39
PHGDH-221ENST00000641573 TBC1D10AQ9BXI6 508 aa12.61□□□□□ -0.39
PHGDH-221ENST00000641573 BRINP2Q9C0B6 783 aa12.61□□□□□ -0.39
PHGDH-221ENST00000641573 SPNS1Q9H2V7 528 aa12.61□□□□□ -0.39
PHGDH-221ENST00000641573 C1orf109Q9NX04 203 aa12.61□□□□□ -0.39
PHGDH-221ENST00000641573 CCDC167Q9P0B6 97 aa12.61□□□□□ -0.39
PHGDH-221ENST00000641573 EIF3LQ9Y262 564 aaKnown RBP12.61□□□□□ -0.39
PHGDH-221ENST00000641573 POLR3HQ9Y535 204 aaPredicted RBP12.61□□□□□ -0.39
PHGDH-221ENST00000641573 PCDHB11Q9Y5F2 797 aa12.61□□□□□ -0.39
PHGDH-221ENST00000641573 MAST4O15021 2626 aa12.61□□□□□ -0.39
PHGDH-221ENST00000641573 TNRC6BQ9UPQ9 1833 aaKnown RBP12.6□□□□□ -0.39
PHGDH-221ENST00000641573 FAM221BA6H8Z2 402 aa12.6□□□□□ -0.39
PHGDH-221ENST00000641573 OR5K4A6NMS3 321 aa12.6□□□□□ -0.39
PHGDH-221ENST00000641573 NPIPB8E9PQR5 432 aa12.6□□□□□ -0.39
PHGDH-221ENST00000641573 GSC2O15499 205 aa12.6□□□□□ -0.39
PHGDH-221ENST00000641573 SNRPB2P08579 225 aaKnown RBP12.6□□□□□ -0.39
PHGDH-221ENST00000641573 HSD3B1P14060 373 aa12.6□□□□□ -0.39
PHGDH-221ENST00000641573 NME1P15531 152 aaKnown RBP12.6□□□□□ -0.39
PHGDH-221ENST00000641573 ENGP17813 658 aa12.6□□□□□ -0.39
PHGDH-221ENST00000641573 HSD3B2P26439 372 aa12.6□□□□□ -0.39
PHGDH-221ENST00000641573 SHMT2P34897 504 aa12.6□□□□□ -0.39
PHGDH-221ENST00000641573 DPP6P42658 865 aa12.6□□□□□ -0.39
PHGDH-221ENST00000641573 NXPH1P58417 271 aa12.6□□□□□ -0.39
PHGDH-221ENST00000641573 YBX1P67809 324 aaKnown RBP12.6□□□□□ -0.39
PHGDH-221ENST00000641573 MEF2AQ02078 507 aaPredicted RBP12.6□□□□□ -0.39
PHGDH-221ENST00000641573 DDX39BQ13838 428 aaKnown RBP12.6□□□□□ -0.39
PHGDH-221ENST00000641573 DNAL1Q4LDG9 190 aa12.6□□□□□ -0.39
PHGDH-221ENST00000641573 ICE2Q659A1 982 aa12.6□□□□□ -0.39
PHGDH-221ENST00000641573 AMIGO1Q86WK6 493 aa12.6□□□□□ -0.39
PHGDH-221ENST00000641573 FUNDC1Q8IVP5 155 aa12.6□□□□□ -0.39
PHGDH-221ENST00000641573 TRIM48Q8IWZ4 208 aa12.6□□□□□ -0.39
PHGDH-221ENST00000641573 LAS2Q8IYD9 372 aa12.6□□□□□ -0.39
PHGDH-221ENST00000641573 KRT78Q8N1N4 520 aa12.6□□□□□ -0.39
PHGDH-221ENST00000641573 LCN9Q8WX39 176 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms