RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 SHMT2P34897 504 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 DCTP40126 519 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 ASMTP46597 345 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 RPS13P62277 151 aaKnown RBP16.47■□□□□ 0.23
PHGDH-211ENST00000641213 PPP1R8Q12972 351 aaKnown RBP16.47■□□□□ 0.23
PHGDH-211ENST00000641213 EIF4HQ15056 248 aaKnown RBP16.47■□□□□ 0.23
PHGDH-211ENST00000641213 SPIN4Q56A73 249 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 CATSPEREQ5SY80 951 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 ANKRD34AQ69YU3 496 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 MED27Q6P2C8 311 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 SPESP1Q6UW49 350 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 LPCAT2Q7L5N7 544 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 GPR141Q7Z602 305 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 ZZZ3Q8IYH5 903 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 PJA1Q8NG27 643 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 SH3KBP1Q96B97 665 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 HIC2Q96JB3 615 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 SAMD11Q96NU1 681 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 MBOAT4Q96T53 435 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 RBM4BQ9BQ04 359 aaKnown RBP16.47■□□□□ 0.23
PHGDH-211ENST00000641213 RBM4Q9BWF3 364 aaKnown RBP16.47■□□□□ 0.23
PHGDH-211ENST00000641213 NPLQ9BXD5 320 aaPredicted RBP16.47■□□□□ 0.23
PHGDH-211ENST00000641213 FAM118AQ9NWS6 357 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 C5orf42Q9H799 3197 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 DOCK9Q9BZ29 2069 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 EFNA1P20827 205 aaPredicted RBP16.46■□□□□ 0.23
PHGDH-211ENST00000641213 ELK4P28324 431 aa16.46■□□□□ 0.23
PHGDH-211ENST00000641213 MAGEA2P43356 314 aa16.46■□□□□ 0.23
PHGDH-211ENST00000641213 YAP1P46937 504 aaKnown RBP16.46■□□□□ 0.23
PHGDH-211ENST00000641213 ESRRGP62508 458 aa16.46■□□□□ 0.23
PHGDH-211ENST00000641213 RBBP5Q15291 538 aaKnown RBP16.46■□□□□ 0.23
PHGDH-211ENST00000641213 VMACQ2NL98 169 aa16.46■□□□□ 0.23
PHGDH-211ENST00000641213 ZBED5Q49AG3 693 aa16.46■□□□□ 0.23
PHGDH-211ENST00000641213 TMEM52BQ4KMG9 183 aa16.46■□□□□ 0.23
PHGDH-211ENST00000641213 EID3Q8N140 333 aa16.46■□□□□ 0.23
PHGDH-211ENST00000641213 PGBD3Q8N328 593 aa16.46■□□□□ 0.23
PHGDH-211ENST00000641213 LMNTD1Q8N9Z9 388 aa16.46■□□□□ 0.23
PHGDH-211ENST00000641213 GPR156Q8NFN8 814 aa16.46■□□□□ 0.23
PHGDH-211ENST00000641213 OR9A1PQ8NGU1 263 aa16.46■□□□□ 0.23
PHGDH-211ENST00000641213 SMARCD2Q92925 531 aa16.46■□□□□ 0.23
PHGDH-211ENST00000641213 WDR34Q96EX3 536 aa16.46■□□□□ 0.23
PHGDH-211ENST00000641213 PPP1R16AQ96I34 528 aa16.46■□□□□ 0.23
PHGDH-211ENST00000641213 LINC00615Q96LM1 132 aaPredicted RBP16.46■□□□□ 0.23
PHGDH-211ENST00000641213 SGPP1Q9BX95 441 aa16.46■□□□□ 0.23
PHGDH-211ENST00000641213 TMEM245Q9H330 911 aa16.46■□□□□ 0.23
PHGDH-211ENST00000641213 IFT80Q9P2H3 777 aaPredicted RBP16.46■□□□□ 0.23
PHGDH-211ENST00000641213 SAMD4AQ9UPU9 718 aaKnown RBP16.46■□□□□ 0.23
PHGDH-211ENST00000641213 ZNF682O95780 498 aa16.46■□□□□ 0.22
PHGDH-211ENST00000641213 ZNF8P17098 575 aaPredicted RBP16.46■□□□□ 0.22
PHGDH-211ENST00000641213 TSTA3Q13630 321 aaPredicted RBP16.46■□□□□ 0.22
PHGDH-211ENST00000641213 GTF2H3Q13889 308 aa16.46■□□□□ 0.22
PHGDH-211ENST00000641213 SPIDRQ14159 915 aa16.46■□□□□ 0.22
PHGDH-211ENST00000641213 STARD3Q14849 445 aa16.46■□□□□ 0.22
PHGDH-211ENST00000641213 HKDC1Q2TB90 917 aa16.46■□□□□ 0.22
PHGDH-211ENST00000641213 LRRC23Q53EV4 343 aaPredicted RBP16.46■□□□□ 0.22
PHGDH-211ENST00000641213 CPTPQ5TA50 214 aa16.46■□□□□ 0.22
PHGDH-211ENST00000641213 CPZQ66K79 652 aa16.46■□□□□ 0.22
PHGDH-211ENST00000641213 PDE12Q6L8Q7 609 aaKnown RBP16.46■□□□□ 0.22
PHGDH-211ENST00000641213 TRMT11Q7Z4G4 463 aaKnown RBP16.46■□□□□ 0.22
PHGDH-211ENST00000641213 PTOV1Q86YD1 416 aa16.46■□□□□ 0.22
PHGDH-211ENST00000641213 CHPFQ8IZ52 775 aa16.46■□□□□ 0.22
PHGDH-211ENST00000641213 REPS1Q96D71 796 aa16.46■□□□□ 0.22
PHGDH-211ENST00000641213 ZNF514Q96K75 400 aaPredicted RBP16.46■□□□□ 0.22
PHGDH-211ENST00000641213 SH3GL3Q99963 347 aa16.46■□□□□ 0.22
PHGDH-211ENST00000641213 AMBRA1Q9C0C7 1298 aa16.46■□□□□ 0.22
PHGDH-211ENST00000641213 PRM3Q9NNZ6 103 aa16.46■□□□□ 0.22
PHGDH-211ENST00000641213 DDX18Q9NVP1 670 aaKnown RBP16.46■□□□□ 0.22
PHGDH-211ENST00000641213 PCDHB11Q9Y5F2 797 aa16.46■□□□□ 0.22
PHGDH-211ENST00000641213 TRPM6Q9BX84 2022 aa16.45■□□□□ 0.22
PHGDH-211ENST00000641213 PLXND1Q9Y4D7 1925 aa16.45■□□□□ 0.22
PHGDH-211ENST00000641213 C17orf113A0A1B0GUU1 675 aa16.45■□□□□ 0.22
PHGDH-211ENST00000641213 E2F6O75461 281 aa16.45■□□□□ 0.22
PHGDH-211ENST00000641213 TRMUO75648 421 aaKnown RBP16.45■□□□□ 0.22
PHGDH-211ENST00000641213 POP7O75817 140 aaKnown RBP16.45■□□□□ 0.22
PHGDH-211ENST00000641213 IDSP22304 550 aa16.45■□□□□ 0.22
PHGDH-211ENST00000641213 PRKACGP22612 351 aa16.45■□□□□ 0.22
PHGDH-211ENST00000641213 TIA1P31483 386 aaKnown RBP eCLIP16.45■□□□□ 0.22
PHGDH-211ENST00000641213 HLCSP50747 726 aa16.45■□□□□ 0.22
PHGDH-211ENST00000641213 CCR3P51677 355 aa16.45■□□□□ 0.22
PHGDH-211ENST00000641213 PNLIPRP1P54315 467 aa16.45■□□□□ 0.22
PHGDH-211ENST00000641213 EPS8Q12929 822 aa16.45■□□□□ 0.22
PHGDH-211ENST00000641213 TTC23Q5W5X9 447 aa16.45■□□□□ 0.22
PHGDH-211ENST00000641213 ERICH5Q6P6B1 374 aa16.45■□□□□ 0.22
PHGDH-211ENST00000641213 CRTC3Q6UUV7 619 aa16.45■□□□□ 0.22
PHGDH-211ENST00000641213 ERN2Q76MJ5 926 aaKnown RBP16.45■□□□□ 0.22
PHGDH-211ENST00000641213 CAMKMTQ7Z624 323 aa16.45■□□□□ 0.22
PHGDH-211ENST00000641213 MMAAQ8IVH4 418 aaKnown RBP16.45■□□□□ 0.22
PHGDH-211ENST00000641213 ZDHHC21Q8IVQ6 265 aa16.45■□□□□ 0.22
PHGDH-211ENST00000641213 LRRC56Q8IYG6 542 aaPredicted RBP16.45■□□□□ 0.22
PHGDH-211ENST00000641213 ERLEC1Q96DZ1 483 aa16.45■□□□□ 0.22
PHGDH-211ENST00000641213 DYRK4Q9NR20 520 aa16.45■□□□□ 0.22
PHGDH-211ENST00000641213 BTNL2Q9UIR0 455 aa16.45■□□□□ 0.22
PHGDH-211ENST00000641213 GPR34Q9UPC5 381 aa16.45■□□□□ 0.22
PHGDH-211ENST00000641213 MAPRE3Q9UPY8 281 aa16.45■□□□□ 0.22
PHGDH-211ENST00000641213 DYRK1BQ9Y463 629 aa16.45■□□□□ 0.22
PHGDH-211ENST00000641213 NUMA1Q14980 2115 aa16.45■□□□□ 0.22
PHGDH-211ENST00000641213 GNG14A0A1W2PPG7 69 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 MGAT4DA6NG13 374 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 GRXCR1A8MXD5 290 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 C1GALT1C1LP0DN25 315 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms