RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 CRY2Q49AN0 593 aa2.85□□□□□ -1.95
ATM-230ENST00000640388 DCAF10Q5QP82 559 aa2.85□□□□□ -1.95
ATM-230ENST00000640388 GRTP1Q5TC63 336 aa2.85□□□□□ -1.95
ATM-230ENST00000640388 ARHGEF16Q5VV41 709 aa2.85□□□□□ -1.95
ATM-230ENST00000640388 DHRS7BQ6IAN0 325 aaPredicted RBP2.85□□□□□ -1.95
ATM-230ENST00000640388 FIGLAQ6QHK4 219 aa2.85□□□□□ -1.95
ATM-230ENST00000640388 NBPF5PQ86XG9 351 aaPredicted RBP2.85□□□□□ -1.95
ATM-230ENST00000640388 DDHD1Q8NEL9 900 aa2.85□□□□□ -1.95
ATM-230ENST00000640388 OLIG1Q8TAK6 271 aa2.85□□□□□ -1.95
ATM-230ENST00000640388 RNF128Q8TEB7 428 aa2.85□□□□□ -1.95
ATM-230ENST00000640388 HSD17B8Q92506 261 aa2.85□□□□□ -1.95
ATM-230ENST00000640388 NSUN4Q96CB9 384 aaKnown RBP2.85□□□□□ -1.95
ATM-230ENST00000640388 CALML4Q96GE6 196 aa2.85□□□□□ -1.95
ATM-230ENST00000640388 SERINC2Q96SA4 455 aa2.85□□□□□ -1.95
ATM-230ENST00000640388 GFRA4Q9GZZ7 299 aa2.85□□□□□ -1.95
ATM-230ENST00000640388 PSD3Q9NYI0 1048 aa2.85□□□□□ -1.95
ATM-230ENST00000640388 CLIC5Q9NZA1 410 aa2.85□□□□□ -1.95
ATM-230ENST00000640388 GPR34Q9UPC5 381 aa2.85□□□□□ -1.95
ATM-230ENST00000640388 TTLL3Q9Y4R7 772 aa2.85□□□□□ -1.95
ATM-230ENST00000640388 MGAQ8IWI9 3026 aa2.85□□□□□ -1.95
ATM-230ENST00000640388 A0A1W2PP64 1363 aa2.85□□□□□ -1.95
ATM-230ENST00000640388 ATRQ13535 2644 aa2.85□□□□□ -1.95
ATM-230ENST00000640388 ATMQ13315 3056 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 UTP20O75691 2785 aaKnown RBP2.84□□□□□ -1.95
ATM-230ENST00000640388 SIP14410 1827 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 IGKV3D-15A0A087WSY6 115 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 HYKKA2RU49 373 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 ZNF197O14709 1029 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 ZNF821O75541 412 aaPredicted RBP2.84□□□□□ -1.95
ATM-230ENST00000640388 PIGNO95427 931 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 NADKO95544 446 aaPredicted RBP2.84□□□□□ -1.95
ATM-230ENST00000640388 EML2O95834 649 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 BCL10O95999 233 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 EDN1P05305 212 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 HMBSP08397 361 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 PORP16435 677 aaPredicted RBP2.84□□□□□ -1.95
ATM-230ENST00000640388 ZNF26P17031 533 aaPredicted RBP2.84□□□□□ -1.95
ATM-230ENST00000640388 SAT1P21673 171 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 ELAVL4P26378 380 aaKnown RBP2.84□□□□□ -1.95
ATM-230ENST00000640388 CCND3P30281 292 aaPredicted RBP2.84□□□□□ -1.95
ATM-230ENST00000640388 TPD52P55327 224 aaPredicted RBP2.84□□□□□ -1.95
ATM-230ENST00000640388 PSMC6P62333 389 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 CX3CL1P78423 397 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 CDK3Q00526 305 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 DMPKQ09013 629 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 CUL4AQ13619 759 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 ITGA9Q13797 1035 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 FCN2Q15485 313 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 CYP4A22Q5TCH4 519 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 KRT79Q5XKE5 535 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 TEX38Q6PEX7 206 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 SLC16A9Q7RTY1 509 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 COMMD2Q86X83 199 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 CEP57Q86XR8 500 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 KRTAP7-1Q8IUC3 87 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 PPFIBP2Q8ND30 876 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 MCUQ8NE86 351 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 OR5M8Q8NGP6 311 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 ERP27Q96DN0 273 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 NEK1Q96PY6 1258 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 TEX12Q9BXU0 123 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 VN1R1Q9GZP7 353 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 MMP27Q9H306 513 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 DPAGT1Q9H3H5 408 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 FGF22Q9HCT0 170 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 A4GALTQ9NPC4 353 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 ZNF71Q9NQZ8 489 aaPredicted RBP2.84□□□□□ -1.95
ATM-230ENST00000640388 C2orf42Q9NWW7 574 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 OSGIN1Q9UJX0 560 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 ZHX1Q9UKY1 873 aaPredicted RBP2.84□□□□□ -1.95
ATM-230ENST00000640388 PCDHGB4Q9UN71 923 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 RIPK3Q9Y572 518 aa2.84□□□□□ -1.95
ATM-230ENST00000640388 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.84□□□□□ -1.95
ATM-230ENST00000640388 RTL1A6NKG5 1358 aa2.84□□□□□ -1.96
ATM-230ENST00000640388 RPAP1Q9BWH6 1393 aaPredicted RBP2.84□□□□□ -1.96
ATM-230ENST00000640388 CACNA1DQ01668 2161 aa2.84□□□□□ -1.96
ATM-230ENST00000640388 COL11A1P12107 1806 aaPredicted RBP2.84□□□□□ -1.96
ATM-230ENST00000640388 PTPRSQ13332 1948 aa2.83□□□□□ -1.96
ATM-230ENST00000640388 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.83□□□□□ -1.96
ATM-230ENST00000640388 IGHV4-61A0A0C4DH41 118 aa2.83□□□□□ -1.96
ATM-230ENST00000640388 A8MV72 311 aaPredicted RBP2.83□□□□□ -1.96
ATM-230ENST00000640388 SH2B2O14492 632 aaPredicted RBP2.83□□□□□ -1.96
ATM-230ENST00000640388 GAPDHSO14556 408 aaPredicted RBP2.83□□□□□ -1.96
ATM-230ENST00000640388 TSPAN1O60635 241 aa2.83□□□□□ -1.96
ATM-230ENST00000640388 ENTPD3O75355 529 aa2.83□□□□□ -1.96
ATM-230ENST00000640388 MED24O75448 989 aa2.83□□□□□ -1.96
ATM-230ENST00000640388 GFPT2O94808 682 aa2.83□□□□□ -1.96
ATM-230ENST00000640388 IGHV4-59P01825 116 aa2.83□□□□□ -1.96
ATM-230ENST00000640388 WNT5AP41221 380 aa2.83□□□□□ -1.96
ATM-230ENST00000640388 MATR3P43243 847 aaKnown RBP eCLIP2.83□□□□□ -1.96
ATM-230ENST00000640388 STAT2P52630 851 aa2.83□□□□□ -1.96
ATM-230ENST00000640388 CDR2Q01850 454 aa2.83□□□□□ -1.96
ATM-230ENST00000640388 EPS8Q12929 822 aa2.83□□□□□ -1.96
ATM-230ENST00000640388 GRAPQ13588 217 aa2.83□□□□□ -1.96
ATM-230ENST00000640388 NR1D2Q14995 579 aa2.83□□□□□ -1.96
ATM-230ENST00000640388 PCLAFQ15004 111 aa2.83□□□□□ -1.96
ATM-230ENST00000640388 P2RY6Q15077 328 aa2.83□□□□□ -1.96
ATM-230ENST00000640388 ZFP69Q49AA0 526 aa2.83□□□□□ -1.96
ATM-230ENST00000640388 ZC2HC1BQ5TFG8 222 aa2.83□□□□□ -1.96
ATM-230ENST00000640388 C16orf54Q6UWD8 224 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms