RNA–Protein interactions for RNA: ENST00000638708.1

STRADA-231, Transcript of STE20-related kinase adaptor alpha, human

TSL 2 BASIC

Gene STRADA, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-231	ENST00000638708	NDUFA2	O43678	99 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	TNFRSF21	O75509	655 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	LGI1	O95970	557 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	ZNF250	P15622	560 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	GPC1	P35052	558 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	ETV1	P50549	477 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	HK3	P52790	923 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	B2M	P61769	119 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	RIN1	Q13671	783 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	GALE	Q14376	348 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	PTCHD3	Q3KNS1	767 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	SIRPB2	Q5JXA9	342 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	MANEAL	Q5VSG8	457 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	ERICH5	Q6P6B1	374 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	RNF165	Q6ZSG1	346 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	EIF3M	Q7L2H7	374 aa	Known RBP	10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	PRSS42	Q7Z5A4	293 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	GPSM1	Q86YR5	675 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	LIX1	Q8N485	282 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	DTX3	Q8N9I9	347 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	DUSP18	Q8NEJ0	188 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	HSH2D	Q96JZ2	352 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	HBEGF	Q99075	208 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	MCOLN1	Q9GZU1	580 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	PPA2	Q9H2U2	334 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	MIXL1	Q9H2W2	232 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	MYOZ2	Q9NPC6	264 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	EXOSC4	Q9NPD3	245 aa	Known RBP	10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	SERHL	Q9NQF3	203 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	MCUB	Q9NWR8	336 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	TAS2R16	Q9NYV7	291 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	NUDT4	Q9NZJ9	180 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	CD274	Q9NZQ7	290 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	ZMAT5	Q9UDW3	170 aa	Known RBP	10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	SEC14L4	Q9UDX3	406 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	GJD2	Q9UKL4	321 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	AKT3	Q9Y243	479 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	SMLR1	H3BR10	107 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	RGS14	O43566	566 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	SLC43A1	O75387	559 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	ARIH2	O95376	493 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	MMP2	P08253	660 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	ATXN1L	P0C7T5	689 aa	Known RBP	10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	BRCC3	P46736	316 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	TAF6	P49848	677 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	ABRAXAS2	Q15018	415 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	AANAT	Q16613	207 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	MZT2B	Q6NZ67	158 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	TEX261	Q6UWH6	196 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	BHLHA9	Q7RTU4	235 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	GOLGA7	Q7Z5G4	137 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	COMMD7	Q86VX2	200 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	RASAL3	Q86YV0	1011 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	C1orf52	Q8N6N3	182 aa	Known RBP	10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	B3GNT7	Q8NFL0	401 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	OR4F6	Q8NGB9	312 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	LILRB1	Q8NHL6	650 aa	Predicted RBP	10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	ESAM	Q96AP7	390 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	MSANTD3	Q96H12	275 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	AS3MT	Q9HBK9	375 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	HHATL	Q9HCP6	504 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	SNTG1	Q9NSN8	517 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	RBFOX1	Q9NWB1	397 aa	Known RBP	10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	RIMKLB	Q9ULI2	386 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	GABRQ	Q9UN88	632 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	PCDHGA2	Q9Y5H1	932 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	CFAP20	Q9Y6A4	193 aa	Known RBP	10.75	□□□□□ -0.69
STRADA-231	ENST00000638708		U3KQ87	197 aa		10.75	□□□□□ -0.69
STRADA-231	ENST00000638708	MCM3AP	O60318	1980 aa		10.74	□□□□□ -0.69
STRADA-231	ENST00000638708	FABP12	A6NFH5	140 aa		10.74	□□□□□ -0.69
STRADA-231	ENST00000638708	SLC28A1	O00337	649 aa		10.74	□□□□□ -0.69
STRADA-231	ENST00000638708	TSPAN12	O95859	305 aa		10.74	□□□□□ -0.69
STRADA-231	ENST00000638708	SCG5	P05408	212 aa		10.74	□□□□□ -0.69
STRADA-231	ENST00000638708	USP17L7	P0C7H9	530 aa		10.74	□□□□□ -0.69
STRADA-231	ENST00000638708	ITGB7	P26010	798 aa		10.74	□□□□□ -0.69
STRADA-231	ENST00000638708	PTPN6	P29350	595 aa		10.74	□□□□□ -0.69
STRADA-231	ENST00000638708	HMGCL	P35914	325 aa		10.74	□□□□□ -0.69
STRADA-231	ENST00000638708	RIPPLY1	Q0D2K3	151 aa		10.74	□□□□□ -0.69
STRADA-231	ENST00000638708	ZNF267	Q14586	743 aa	Predicted RBP	10.74	□□□□□ -0.69
STRADA-231	ENST00000638708	PCBP2	Q15366	365 aa	Known RBP eCLIP	10.74	□□□□□ -0.69
STRADA-231	ENST00000638708	GRIK4	Q16099	956 aa		10.74	□□□□□ -0.69
STRADA-231	ENST00000638708	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	10.74	□□□□□ -0.69
STRADA-231	ENST00000638708	SV2C	Q496J9	727 aa		10.74	□□□□□ -0.69
STRADA-231	ENST00000638708	PYDC2	Q56P42	97 aa		10.74	□□□□□ -0.69
STRADA-231	ENST00000638708	RAB41	Q5JT25	222 aa		10.74	□□□□□ -0.69
STRADA-231	ENST00000638708	GARNL3	Q5VVW2	1013 aa		10.74	□□□□□ -0.69
STRADA-231	ENST00000638708	NADSYN1	Q6IA69	706 aa		10.74	□□□□□ -0.69
STRADA-231	ENST00000638708	TYW3	Q6IPR3	259 aa	Known RBP	10.74	□□□□□ -0.69
STRADA-231	ENST00000638708	BRAT1	Q6PJG6	821 aa		10.74	□□□□□ -0.69
STRADA-231	ENST00000638708	CBLL1	Q75N03	491 aa		10.74	□□□□□ -0.69
STRADA-231	ENST00000638708	GPRIN1	Q7Z2K8	1008 aa		10.74	□□□□□ -0.69
STRADA-231	ENST00000638708	VTCN1	Q7Z7D3	282 aa		10.74	□□□□□ -0.69
STRADA-231	ENST00000638708	UBE2Q1	Q7Z7E8	422 aa		10.74	□□□□□ -0.69
STRADA-231	ENST00000638708	DDX53	Q86TM3	631 aa	Known RBP	10.74	□□□□□ -0.69
STRADA-231	ENST00000638708	SERPINA11	Q86U17	422 aa		10.74	□□□□□ -0.69
STRADA-231	ENST00000638708	FAM124A	Q86V42	546 aa		10.74	□□□□□ -0.69
STRADA-231	ENST00000638708	KRTCAP2	Q8N6L1	136 aa		10.74	□□□□□ -0.69
STRADA-231	ENST00000638708	TOP6BL	Q8N6T0	577 aa		10.74	□□□□□ -0.69
STRADA-231	ENST00000638708	ZNF680	Q8NEM1	530 aa		10.74	□□□□□ -0.69
STRADA-231	ENST00000638708	OR4L1	Q8NH43	312 aa		10.74	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms