RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	XRCC1	P18887	633 aa	Predicted RBP	13.9	□□□□□ -0.18
NEDD4L-238	ENST00000635997	PEX2	P28328	305 aa		13.9	□□□□□ -0.18
NEDD4L-238	ENST00000635997	NCBP2	P52298	156 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
NEDD4L-238	ENST00000635997	CDKN2D	P55273	166 aa		13.9	□□□□□ -0.18
NEDD4L-238	ENST00000635997	RFX4	Q33E94	735 aa		13.9	□□□□□ -0.18
NEDD4L-238	ENST00000635997	ANKRD49	Q8WVL7	239 aa		13.9	□□□□□ -0.18
NEDD4L-238	ENST00000635997	TSACC	Q96A04	125 aa	Predicted RBP	13.9	□□□□□ -0.18
NEDD4L-238	ENST00000635997	FAM83C	Q9BQN1	747 aa		13.9	□□□□□ -0.18
NEDD4L-238	ENST00000635997	CEP44	Q9C0F1	390 aa		13.9	□□□□□ -0.18
NEDD4L-238	ENST00000635997	HRASLS2	Q9NWW9	162 aa		13.9	□□□□□ -0.18
NEDD4L-238	ENST00000635997	GPR34	Q9UPC5	381 aa		13.9	□□□□□ -0.18
NEDD4L-238	ENST00000635997	ARAP2	Q8WZ64	1704 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	KMO	O15229	486 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	PAPSS2	O95340	614 aa	Predicted RBP	13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	SLC35E2B	P0CK96	405 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	BPI	P17213	487 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	NR4A1	P22736	598 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	SOX6	P35712	828 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	HMGCL	P35914	325 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	RGR	P47804	291 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	RXRG	P48443	463 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	RPL26	P61254	145 aa	Known RBP	13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	PCDH1	Q08174	1060 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	PTGR1	Q14914	329 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	RABL3	Q5HYI8	236 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	C6orf52	Q5T4I8	152 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	TPK1	Q9H3S4	243 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	SCML1	Q9UN30	329 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	RPL26L1	Q9UNX3	145 aa	Known RBP	13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	DHRS7	Q9Y394	339 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	COL4A5	P29400	1685 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	FOXD2	O60548	495 aa	Predicted RBP	13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	CDC123	O75794	336 aa	Predicted RBP	13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	C6	P13671	934 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	OC90	Q02509	493 aa	Predicted RBP	13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	TICAM1	Q8IUC6	712 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	FIBIN	Q8TAL6	211 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	AURKB	Q96GD4	344 aa	Predicted RBP	13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	C17orf62	Q9BQA9	187 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	EURL	Q9NYK6	297 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	PCDHGA4	Q9Y5G9	962 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	CACNA1C	Q13936	2221 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	IFNW1	P05000	195 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	PRG2	P13727	222 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	ECHS1	P30084	290 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	CSNK1E	P49674	416 aa	Known RBP	13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	TAS2R50	P59544	299 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	DEFA1	P59665	94 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	DEFA3	P59666	94 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	PRR5	P85299	388 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	MADCAM1	Q13477	382 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	MED22	Q15528	200 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	ADRM1	Q16186	407 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	TRIM71	Q2Q1W2	868 aa	Known RBP	13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	GALNT10	Q86SR1	603 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	RBM12B	Q8IXT5	1001 aa	Known RBP	13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	GHDC	Q8N2G8	530 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	NSMCE3	Q96MG7	304 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	ARRDC1-AS1	Q9H2J1	176 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	ANKH	Q9HCJ1	492 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	MOCS1	Q9NZB8	636 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	CPSF4L	A6NMK7	179 aa	Known RBP	13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	KPNA4	O00629	521 aa	Predicted RBP	13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	B3GALT2	O43825	422 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	DIRAS1	O95057	198 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	PTN	P21246	168 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	GSTM5	P46439	218 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	CLK3	P49761	638 aa	Known RBP	13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	CCDC103	Q8IW40	242 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	SMPDL3B	Q92485	455 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	SEC14L1	Q92503	715 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	ZFR	Q96KR1	1074 aa	Known RBP	13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	COL21A1	Q96P44	957 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	CHID1	Q9BWS9	393 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	DERL2	Q9GZP9	239 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	PCBD2	Q9H0N5	130 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	WNT16	Q9UBV4	365 aa		13.89	□□□□□ -0.19
NEDD4L-238	ENST00000635997	PRR23D1	E9PI22	279 aa	Predicted RBP	13.88	□□□□□ -0.19
NEDD4L-238	ENST00000635997	PDPK1	O15530	556 aa		13.88	□□□□□ -0.19
NEDD4L-238	ENST00000635997	TYROBP	O43914	113 aa		13.88	□□□□□ -0.19
NEDD4L-238	ENST00000635997	KRT33A	O76009	404 aa		13.88	□□□□□ -0.19
NEDD4L-238	ENST00000635997	PRR23D2	P0DMB1	279 aa	Predicted RBP	13.88	□□□□□ -0.19
NEDD4L-238	ENST00000635997	SLC6A11	P48066	632 aa		13.88	□□□□□ -0.19
NEDD4L-238	ENST00000635997	SPEM2	Q0P670	501 aa		13.88	□□□□□ -0.19
NEDD4L-238	ENST00000635997	NUDT13	Q86X67	352 aa		13.88	□□□□□ -0.19
NEDD4L-238	ENST00000635997	SFRP1	Q8N474	314 aa		13.88	□□□□□ -0.19
NEDD4L-238	ENST00000635997	SPEM1	Q8N4L4	309 aa		13.88	□□□□□ -0.19
NEDD4L-238	ENST00000635997	SVOP	Q8N4V2	548 aa		13.88	□□□□□ -0.19
NEDD4L-238	ENST00000635997	COX18	Q8N8Q8	333 aa		13.88	□□□□□ -0.19
NEDD4L-238	ENST00000635997	RAB7B	Q96AH8	199 aa		13.88	□□□□□ -0.19
NEDD4L-238	ENST00000635997	ZBED6CL	Q96FA7	236 aa	Predicted RBP	13.88	□□□□□ -0.19
NEDD4L-238	ENST00000635997	WDR92	Q96MX6	357 aa		13.88	□□□□□ -0.19
NEDD4L-238	ENST00000635997	DEPDC7	Q96QD5	511 aa		13.88	□□□□□ -0.19
NEDD4L-238	ENST00000635997	ADI1	Q9BV57	179 aa		13.88	□□□□□ -0.19
NEDD4L-238	ENST00000635997	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
NEDD4L-238	ENST00000635997		A0A1B0GTW7	788 aa		13.88	□□□□□ -0.19
NEDD4L-238	ENST00000635997	ZNF487	B1APH4	448 aa		13.88	□□□□□ -0.19
NEDD4L-238	ENST00000635997		E7ENX8	843 aa		13.88	□□□□□ -0.19
NEDD4L-238	ENST00000635997	CLIC1	O00299	241 aa		13.88	□□□□□ -0.19

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