RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 MMP25Q9NPA2 562 aa2.85□□□□□ -1.95
PSPC1-208ENST00000635562 PPANQ9NQ55 473 aaKnown RBP2.85□□□□□ -1.95
PSPC1-208ENST00000635562 OLAHQ9NV23 265 aa2.85□□□□□ -1.95
PSPC1-208ENST00000635562 HAO2Q9NYQ3 351 aa2.85□□□□□ -1.95
PSPC1-208ENST00000635562 KLHL8Q9P2G9 620 aaPredicted RBP2.85□□□□□ -1.95
PSPC1-208ENST00000635562 CHRNA9Q9UGM1 479 aa2.85□□□□□ -1.95
PSPC1-208ENST00000635562 DBNLQ9UJU6 430 aaKnown RBP2.85□□□□□ -1.95
PSPC1-208ENST00000635562 PCDHA7Q9UN72 937 aa2.85□□□□□ -1.95
PSPC1-208ENST00000635562 SATB2Q9UPW6 733 aa2.85□□□□□ -1.95
PSPC1-208ENST00000635562 ERVK-11Q9UQG0 969 aa2.85□□□□□ -1.95
PSPC1-208ENST00000635562 SRPRBQ9Y5M8 271 aaKnown RBP2.85□□□□□ -1.95
PSPC1-208ENST00000635562 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.85□□□□□ -1.95
PSPC1-208ENST00000635562 ZNF644Q9H582 1327 aaPredicted RBP2.85□□□□□ -1.95
PSPC1-208ENST00000635562 ADCY9O60503 1353 aa2.85□□□□□ -1.95
PSPC1-208ENST00000635562 A0A0U1RQJ8 604 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 LOC105371267A0A1B0GV96 52 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 GOLGA8IPA6NC78 632 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 C4orf47A7E2U8 309 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 BECN2A8MW95 431 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 MEI4A8MW99 385 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 SUPT3HB4E1H0 165 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 KBTBD13C9JR72 458 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 SLCO1B7G3V0H7 640 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 SMIM22K7EJ46 135 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 ZNF701M0R085 212 aaPredicted RBP2.84□□□□□ -1.95
PSPC1-208ENST00000635562 ANKRD28O15084 1053 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 MDM4O15151 490 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 INPPL1O15357 1258 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 ZNF264O43296 627 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 LANCL1O43813 399 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 KLK8O60259 260 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 MITFO75030 526 aaPredicted RBP2.84□□□□□ -1.95
PSPC1-208ENST00000635562 SNNO75324 88 aaPredicted RBP2.84□□□□□ -1.95
PSPC1-208ENST00000635562 NME6O75414 186 aaPredicted RBP2.84□□□□□ -1.95
PSPC1-208ENST00000635562 DDNO94850 711 aaPredicted RBP2.84□□□□□ -1.95
PSPC1-208ENST00000635562 TMCC1O94876 653 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 CELF2O95319 508 aaKnown RBP2.84□□□□□ -1.95
PSPC1-208ENST00000635562 SNAI1O95863 264 aaPredicted RBP2.84□□□□□ -1.95
PSPC1-208ENST00000635562 GH1P01241 217 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 LCATP04180 440 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 WNT1P04628 370 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 PGK2P07205 417 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 CYP4B1P13584 511 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 AKR1A1P14550 325 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 ST6GAL1P15907 406 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 MSR1P21757 451 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 CFL1P23528 166 aaKnown RBP2.84□□□□□ -1.95
PSPC1-208ENST00000635562 CYP2F1P24903 491 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 TACR3P29371 465 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 TKTP29401 623 aaKnown RBP2.84□□□□□ -1.95
PSPC1-208ENST00000635562 TYK2P29597 1187 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 CCND3P30281 292 aaPredicted RBP2.84□□□□□ -1.95
PSPC1-208ENST00000635562 TIA1P31483 386 aaKnown RBP eCLIP2.84□□□□□ -1.953e-6■■■■□ 19.7
PSPC1-208ENST00000635562 SHMT1P34896 483 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 RYKP34925 604 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 CCT3P49368 545 aaKnown RBP2.84□□□□□ -1.95
PSPC1-208ENST00000635562 TUFMP49411 452 aaKnown RBP2.84□□□□□ -1.95
PSPC1-208ENST00000635562 HTR6P50406 440 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 MTTPP55157 894 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 GSDMDP57764 484 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 RPL23AP62750 156 aaKnown RBP2.84□□□□□ -1.95
PSPC1-208ENST00000635562 PDE1BQ01064 536 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 CFHR1Q03591 330 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 TGM3Q08188 693 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 LGALS3BPQ08380 585 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 SPOCK1Q08629 439 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 PDE7AQ13946 482 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 SLC39A14Q15043 492 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 PON2Q15165 354 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 DPCR1Q3MIW9 517 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 HSDL1Q3SXM5 330 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 Q4G0T1 1027 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 HIKESHIQ53FT3 197 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 TMEM41BQ5BJD5 291 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 MTX3Q5HYI7 312 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 EARS2Q5JPH6 523 aaKnown RBP2.84□□□□□ -1.95
PSPC1-208ENST00000635562 SPANXN2Q5MJ10 180 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 UBAP2Q5T6F2 1119 aaKnown RBP2.84□□□□□ -1.95
PSPC1-208ENST00000635562 AGBL2Q5U5Z8 902 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 LRRC38Q5VT99 294 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 PRAMEF8Q5VWM4 474 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 MORN5Q5VZ52 161 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 SPECC1LQ69YQ0 1117 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 C11orf87Q6NUJ2 197 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 AADACL2Q6P093 401 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 SLC27A1Q6PCB7 646 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 DHRS13Q6UX07 377 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 ZNF782Q6ZMW2 699 aaPredicted RBP2.84□□□□□ -1.95
PSPC1-208ENST00000635562 CLEC17AQ6ZS10 378 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 RNF144BQ7Z419 303 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 TRMT11Q7Z4G4 463 aaKnown RBP2.84□□□□□ -1.95
PSPC1-208ENST00000635562 PRSS42Q7Z5A4 293 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 PHLDB2Q86SQ0 1253 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 YRDCQ86U90 279 aaKnown RBP2.84□□□□□ -1.95
PSPC1-208ENST00000635562 CDR2LQ86X02 465 aaPredicted RBP2.84□□□□□ -1.95
PSPC1-208ENST00000635562 FAM131BQ86XD5 332 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 NRROSQ86YC3 692 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 SIAH3Q8IW03 269 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 KATNAL2Q8IYT4 538 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 DSELQ8IZU8 1212 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms