RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 SCN2BO60939 215 aa21.25■□□□□ 0.99
PNKP-220ENST00000627232 ADAM23O75077 832 aa21.25■□□□□ 0.99
PNKP-220ENST00000627232 KLF8O95600 359 aaPredicted RBP21.25■□□□□ 0.99
PNKP-220ENST00000627232 EGFP01133 1207 aa21.25■□□□□ 0.99
PNKP-220ENST00000627232 HOXB2P14652 356 aa21.25■□□□□ 0.99
PNKP-220ENST00000627232 CHN2P52757 468 aa21.25■□□□□ 0.99
PNKP-220ENST00000627232 WNT3P56703 355 aa21.25■□□□□ 0.99
PNKP-220ENST00000627232 ADNP2Q6IQ32 1131 aa21.25■□□□□ 0.99
PNKP-220ENST00000627232 LPCAT2Q7L5N7 544 aa21.25■□□□□ 0.99
PNKP-220ENST00000627232 HORMAD1Q86X24 394 aa21.25■□□□□ 0.99
PNKP-220ENST00000627232 KRT78Q8N1N4 520 aa21.25■□□□□ 0.99
PNKP-220ENST00000627232 CXorf40BQ96DE9 158 aa21.25■□□□□ 0.99
PNKP-220ENST00000627232 FAM120BQ96EK7 910 aaKnown RBP21.25■□□□□ 0.99
PNKP-220ENST00000627232 SLC29A1Q99808 456 aa21.25■□□□□ 0.99
PNKP-220ENST00000627232 ADGRE2Q9UHX3 823 aa21.25■□□□□ 0.99
PNKP-220ENST00000627232 FZD4Q9ULV1 537 aa21.25■□□□□ 0.99
PNKP-220ENST00000627232 SLC17A4Q9Y2C5 497 aa21.25■□□□□ 0.99
PNKP-220ENST00000627232 TDRKHQ9Y2W6 561 aaKnown RBP21.25■□□□□ 0.99
PNKP-220ENST00000627232 A0A1W2PQF6 199 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 DPPA5A6NC42 116 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 FPGTO14772 594 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 DRD1P21728 446 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 BMP8BP34820 402 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 HPCAL1P37235 193 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 CDKN2CP42773 168 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 ADPRHP54922 357 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 LRRC74AQ0VAA2 488 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 FAM98BQ52LJ0 330 aaKnown RBP21.24■□□□□ 0.99
PNKP-220ENST00000627232 TMTC4Q5T4D3 741 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 GCNT7Q6ZNI0 430 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 ANKRD46Q86W74 232 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 SMRP1Q8NCR6 262 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 KLK6Q92876 244 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 IL17FQ96PD4 163 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 PRPF18Q99633 342 aaKnown RBP21.24■□□□□ 0.99
PNKP-220ENST00000627232 UGT2B28Q9BY64 529 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 C8orf33Q9H7E9 229 aaPredicted RBP21.24■□□□□ 0.99
PNKP-220ENST00000627232 YY1AP1Q9H869 796 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 BTNL2Q9UIR0 455 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 PLAGL1Q9UM63 463 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 C7orf72A4D263 438 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 CXCR6O00574 342 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 LDLRP01130 860 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 RAP2AP10114 183 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 HOXB6P17509 224 aaKnown RBP21.24■□□□□ 0.99
PNKP-220ENST00000627232 COL9A1P20849 921 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 SOX11P35716 441 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 IGFALSP35858 605 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 CLCNKAP51800 687 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 MRPS21P82921 87 aaKnown RBP21.24■□□□□ 0.99
PNKP-220ENST00000627232 COL19A1Q14993 1142 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 NRF1Q16656 503 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 ANXA8L1Q5VT79 327 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 OR52E8Q6IFG1 317 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 USP30Q70CQ3 517 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 FKBP9P1Q75LS8 142 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 SPRED1Q7Z699 444 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 FAM129CQ86XR2 697 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 TDHQ8IZJ6 230 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 LMNTD1Q8N9Z9 388 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 MFSD2AQ8NA29 543 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 SMPDL3AQ92484 453 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 COQ8BQ96D53 544 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 MENTQ9BUN1 341 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 DUSP26Q9BV47 211 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 PRM3Q9NNZ6 103 aa21.24■□□□□ 0.99
PNKP-220ENST00000627232 EVPLLA8MZ36 301 aa21.23■□□□□ 0.99
PNKP-220ENST00000627232 PCDH7O60245 1069 aa21.23■□□□□ 0.99
PNKP-220ENST00000627232 TPST1O60507 370 aa21.23■□□□□ 0.99
PNKP-220ENST00000627232 CEACAM5P06731 702 aa21.23■□□□□ 0.99
PNKP-220ENST00000627232 RETP07949 1114 aa21.23■□□□□ 0.99
PNKP-220ENST00000627232 CKMT2P17540 419 aa21.23■□□□□ 0.99
PNKP-220ENST00000627232 CXCR2P25025 360 aa21.23■□□□□ 0.99
PNKP-220ENST00000627232 CTBSQ01459 385 aa21.23■□□□□ 0.99
PNKP-220ENST00000627232 CHRNB3Q05901 458 aa21.23■□□□□ 0.99
PNKP-220ENST00000627232 SFSWAPQ12872 951 aaKnown RBP21.23■□□□□ 0.99
PNKP-220ENST00000627232 PON2Q15165 354 aa21.23■□□□□ 0.99
PNKP-220ENST00000627232 C6orf52Q5T4I8 152 aa21.23■□□□□ 0.99
PNKP-220ENST00000627232 CPTPQ5TA50 214 aa21.23■□□□□ 0.99
PNKP-220ENST00000627232 TMIGD1Q6UXZ0 262 aa21.23■□□□□ 0.99
PNKP-220ENST00000627232 C17orf64Q86WR6 236 aa21.23■□□□□ 0.99
PNKP-220ENST00000627232 PHACTR4Q8IZ21 702 aa21.23■□□□□ 0.99
PNKP-220ENST00000627232 METTL4Q8N3J2 472 aa21.23■□□□□ 0.99
PNKP-220ENST00000627232 RAB42Q8N4Z0 105 aa21.23■□□□□ 0.99
PNKP-220ENST00000627232 FIG4Q92562 907 aa21.23■□□□□ 0.99
PNKP-220ENST00000627232 REXO5Q96IC2 774 aaKnown RBP21.23■□□□□ 0.99
PNKP-220ENST00000627232 RNF145Q96MT1 663 aa21.23■□□□□ 0.99
PNKP-220ENST00000627232 PANX1Q96RD7 426 aa21.23■□□□□ 0.99
PNKP-220ENST00000627232 SEPHS2Q99611 448 aa21.23■□□□□ 0.99
PNKP-220ENST00000627232 APOOQ9BUR5 198 aa21.23■□□□□ 0.99
PNKP-220ENST00000627232 CHID1Q9BWS9 393 aa21.23■□□□□ 0.99
PNKP-220ENST00000627232 PITHD1Q9GZP4 211 aaPredicted RBP21.23■□□□□ 0.99
PNKP-220ENST00000627232 SPNS1Q9H2V7 528 aa21.23■□□□□ 0.99
PNKP-220ENST00000627232 ZNF576Q9H609 170 aa21.23■□□□□ 0.99
PNKP-220ENST00000627232 WASH6PQ9NQA3 447 aa21.23■□□□□ 0.99
PNKP-220ENST00000627232 ATP6V1HQ9UI12 483 aa21.23■□□□□ 0.99
PNKP-220ENST00000627232 GMEB1Q9Y692 573 aa21.23■□□□□ 0.99
PNKP-220ENST00000627232 ATG2BQ96BY7 2078 aa21.22■□□□□ 0.99
PNKP-220ENST00000627232 GNG14A0A1W2PPG7 69 aa21.22■□□□□ 0.99
PNKP-220ENST00000627232 PRR19A6NJB7 356 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms