RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 FCRL1Q96LA6 429 aa10.9□□□□□ -0.67
VARS2-213ENST00000625423 ZNF300Q96RE9 604 aaPredicted RBP10.9□□□□□ -0.67
VARS2-213ENST00000625423 MCCC1Q96RQ3 725 aaPredicted RBP10.9□□□□□ -0.67
VARS2-213ENST00000625423 ASPSCR1Q9BZE9 553 aa10.9□□□□□ -0.67
VARS2-213ENST00000625423 WDR12Q9GZL7 423 aaKnown RBP10.9□□□□□ -0.67
VARS2-213ENST00000625423 REEP1Q9H902 201 aa10.9□□□□□ -0.67
VARS2-213ENST00000625423 PPIL1Q9Y3C6 166 aa10.9□□□□□ -0.67
VARS2-213ENST00000625423 PMF1-BGLAPU3KQ54 211 aa10.9□□□□□ -0.67
VARS2-213ENST00000625423 ZNF106Q9H2Y7 1883 aaKnown RBP10.89□□□□□ -0.67
VARS2-213ENST00000625423 TMEM247A6NEH6 219 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 SERPINB7O75635 380 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 ACPPP15309 386 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 GJA1P17302 382 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 AQP1P29972 269 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 ST13P50502 369 aaKnown RBP10.89□□□□□ -0.67
VARS2-213ENST00000625423 HNRNPFP52597 415 aaKnown RBP10.89□□□□□ -0.67
VARS2-213ENST00000625423 RAB33AQ14088 237 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 DGUOKQ16854 277 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 GAREM2Q75VX8 874 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 GPR155Q7Z3F1 870 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 ADCK1Q86TW2 530 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 METTL3Q86U44 580 aaKnown RBP10.89□□□□□ -0.67
VARS2-213ENST00000625423 HS6ST3Q8IZP7 471 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 TAMM41Q96BW9 452 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 DEFB118Q96PH6 123 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 TPT1P8Q9HAU6 139 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 PRM3Q9NNZ6 103 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 ACOT13Q9NPJ3 140 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 LAMA2P24043 3122 aaKnown RBP10.89□□□□□ -0.67
VARS2-213ENST00000625423 SERTM1A2A2V5 107 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 E7EQ34 232 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 PITPNM1O00562 1244 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 HLA-FP30511 346 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 TGFBR1P36897 503 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 RPP38P78345 283 aaKnown RBP10.89□□□□□ -0.67
VARS2-213ENST00000625423 IFITM3Q01628 133 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 CREMQ03060 361 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 ABRQ12979 859 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 SP140Q13342 867 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 OXA1LQ15070 435 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 PLEKHS1Q5SXH7 462 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 ZNF648Q5T619 568 aaPredicted RBP10.89□□□□□ -0.67
VARS2-213ENST00000625423 ADNP2Q6IQ32 1131 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 HTR3DQ70Z44 454 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 TMCO2Q7Z6W1 182 aaPredicted RBP10.89□□□□□ -0.67
VARS2-213ENST00000625423 OR8J2Q8NGG1 315 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 ZNF296Q8WUU4 475 aaPredicted RBP10.89□□□□□ -0.67
VARS2-213ENST00000625423 RPL3LQ92901 407 aaKnown RBP10.89□□□□□ -0.67
VARS2-213ENST00000625423 FOXJ1Q92949 421 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 MAL2Q969L2 176 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 TMEM169Q96HH4 297 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 BCL7BQ9BQE9 202 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 SMG9Q9H0W8 520 aaKnown RBP10.89□□□□□ -0.67
VARS2-213ENST00000625423 RNF208Q9H0X6 261 aa10.89□□□□□ -0.67
VARS2-213ENST00000625423 OR2AG2A6NM03 316 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 NRG2O14511 850 aaPredicted RBP10.88□□□□□ -0.67
VARS2-213ENST00000625423 PCDHGA12O60330 932 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 WBP4O75554 376 aaKnown RBP10.88□□□□□ -0.67
VARS2-213ENST00000625423 TPP2P29144 1249 aaPredicted RBP10.88□□□□□ -0.67
VARS2-213ENST00000625423 GSSP48637 474 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 ITGA1P56199 1179 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 AP1S2P56377 157 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 FPGSQ05932 587 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 ACSM2AQ08AH3 577 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 NPRL3Q12980 569 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 CSTF3Q12996 717 aaKnown RBP10.88□□□□□ -0.67
VARS2-213ENST00000625423 MPP7Q5T2T1 576 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 LIPJQ5W064 366 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 ACSM2BQ68CK6 577 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 AHSA2Q719I0 299 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 TCEAL8Q8IYN2 117 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 SYNPOQ8N3V7 929 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 CPXM2Q8N436 756 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 CHST14Q8NCH0 376 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 WDR20Q8TBZ3 569 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 DYNC2LI1Q8TCX1 351 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 DUSP26Q9BV47 211 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 MROQ9BYG7 248 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 FAM120CQ9NX05 1096 aaKnown RBP10.88□□□□□ -0.67
VARS2-213ENST00000625423 SLCO3A1Q9UIG8 710 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 FZD4Q9ULV1 537 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 PCDHB11Q9Y5F2 797 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 KRBA1A5PL33 1030 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 TMEM202A6NGA9 273 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 ZBBXA8MT70 800 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 SLC16A5O15375 505 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 PRMT3O60678 531 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 NTRK1P04629 796 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 LCKP06239 509 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 CA8P35219 290 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 CRYBA2P53672 197 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 CAMK2GQ13555 558 aaPredicted RBP10.88□□□□□ -0.67
VARS2-213ENST00000625423 DOC2AQ14183 400 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 INAQ16352 499 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 IQCCQ4KMZ1 466 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 Q6ZPB1 254 aaPredicted RBP10.88□□□□□ -0.67
VARS2-213ENST00000625423 THOC6Q86W42 341 aaKnown RBP10.88□□□□□ -0.67
VARS2-213ENST00000625423 SVOPQ8N4V2 548 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 S100ZQ8WXG8 99 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 MRPS31Q92665 395 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms