RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 PRAMEF19Q5SWL8 479 aa11.48□□□□□ -0.57
ATRX-214ENST00000624166 UBE2UQ5VVX9 321 aa11.48□□□□□ -0.57
ATRX-214ENST00000624166 TMEM130Q8N3G9 435 aa11.48□□□□□ -0.57
ATRX-214ENST00000624166 TMEM169Q96HH4 297 aa11.48□□□□□ -0.57
ATRX-214ENST00000624166 NARS2Q96I59 477 aaKnown RBP11.48□□□□□ -0.57
ATRX-214ENST00000624166 ATOH8Q96SQ7 321 aa11.48□□□□□ -0.57
ATRX-214ENST00000624166 CYP2S1Q96SQ9 504 aa11.48□□□□□ -0.57
ATRX-214ENST00000624166 DOHHQ9BU89 302 aa11.48□□□□□ -0.57
ATRX-214ENST00000624166 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.48□□□□□ -0.57
ATRX-214ENST00000624166 POU2F3Q9UKI9 436 aa11.48□□□□□ -0.57
ATRX-214ENST00000624166 SCML2Q9UQR0 700 aa11.48□□□□□ -0.57
ATRX-214ENST00000624166 ZSCAN5BA6NJL1 495 aa11.48□□□□□ -0.57
ATRX-214ENST00000624166 TSPAN4O14817 238 aa11.48□□□□□ -0.57
ATRX-214ENST00000624166 ATF6P18850 670 aa11.48□□□□□ -0.57
ATRX-214ENST00000624166 ATP12AP54707 1039 aa11.48□□□□□ -0.57
ATRX-214ENST00000624166 DCDC1P59894 354 aa11.48□□□□□ -0.57
ATRX-214ENST00000624166 CBLBQ13191 982 aa11.48□□□□□ -0.57
ATRX-214ENST00000624166 SELPLGQ14242 412 aa11.48□□□□□ -0.57
ATRX-214ENST00000624166 RASSF6Q6ZTQ3 369 aa11.48□□□□□ -0.57
ATRX-214ENST00000624166 TMPRSS11BQ86T26 416 aa11.48□□□□□ -0.57
ATRX-214ENST00000624166 KRTCAP2Q8N6L1 136 aa11.48□□□□□ -0.57
ATRX-214ENST00000624166 AQP11Q8NBQ7 271 aa11.48□□□□□ -0.57
ATRX-214ENST00000624166 GANCQ8TET4 914 aa11.48□□□□□ -0.57
ATRX-214ENST00000624166 GPN1Q9HCN4 374 aaPredicted RBP11.48□□□□□ -0.57
ATRX-214ENST00000624166 STRCP1A6NGW2 1772 aa11.48□□□□□ -0.57
ATRX-214ENST00000624166 SH3D21A4FU49 640 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 VIPP01282 170 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 FGBP02675 491 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 OPN1SWP03999 348 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 CASP3P42574 277 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 TAS2R41P59536 307 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 TARDBPQ13148 414 aaKnown RBP eCLIP11.47□□□□□ -0.57
ATRX-214ENST00000624166 ADAM15Q13444 863 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 ZNF630Q2M218 657 aaPredicted RBP11.47□□□□□ -0.57
ATRX-214ENST00000624166 RNF180Q86T96 592 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 SNX29P2Q8IUI4 249 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 PROKR1Q8TCW9 393 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 TTYH1Q9H313 450 aaPredicted RBP11.47□□□□□ -0.57
ATRX-214ENST00000624166 ZDHHC6Q9H6R6 413 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 NPAP1Q9NZP6 1156 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 NCKAP1Q9Y2A7 1128 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 H7C0S8 307 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 CHRM5P08912 532 aaPredicted RBP11.47□□□□□ -0.57
ATRX-214ENST00000624166 HTR6P50406 440 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 CDK6Q00534 326 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 HSF2Q03933 536 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 GANABQ14697 944 aaKnown RBP11.47□□□□□ -0.57
ATRX-214ENST00000624166 PCBP2Q15366 365 aaKnown RBP eCLIP11.47□□□□□ -0.578e-7■■■■□ 21.7
ATRX-214ENST00000624166 TBCEQ15813 527 aaPredicted RBP11.47□□□□□ -0.57
ATRX-214ENST00000624166 GPR162Q16538 588 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 ZNF697Q5TEC3 545 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 LINGO4Q6UY18 593 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 GPRIN1Q7Z2K8 1008 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 LINC00471Q8N535 108 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 NETO1Q8TDF5 533 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 ZNF431Q8TF32 576 aaPredicted RBP11.47□□□□□ -0.57
ATRX-214ENST00000624166 CCDC115Q96NT0 180 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 GPR78Q96P69 363 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 MTERF1Q99551 399 aaKnown RBP11.47□□□□□ -0.57
ATRX-214ENST00000624166 CTRCQ99895 268 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 TBC1D17Q9HA65 648 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 EVLQ9UI08 416 aaPredicted RBP11.47□□□□□ -0.57
ATRX-214ENST00000624166 A3GALT2U3KPV4 340 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 TRBC2A0A5B9 178 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 INMT-MINDY4F8WBC2 141 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 PPP6CO00743 305 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 C1QAP02745 245 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 CORO1AP31146 461 aaKnown RBP11.47□□□□□ -0.57
ATRX-214ENST00000624166 IDUAP35475 653 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 HTR2BP41595 481 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 GPAT3Q53EU6 434 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 RUNDC3AQ59EK9 446 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 PPP2R2DQ66LE6 453 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 GPR149Q86SP6 731 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 NOXA1Q86UR1 476 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 AMIGO1Q86WK6 493 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 NPAS3Q8IXF0 933 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 RAVER1Q8IY67 606 aaKnown RBP11.47□□□□□ -0.57
ATRX-214ENST00000624166 OR6K2Q8NGY2 324 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 NEURL2Q9BR09 285 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 ACAT2Q9BWD1 397 aa11.47□□□□□ -0.57
ATRX-214ENST00000624166 MRPL9Q9BYD2 267 aaKnown RBP11.47□□□□□ -0.57
ATRX-214ENST00000624166 ZBTB20Q9HC78 741 aaPredicted RBP11.47□□□□□ -0.57
ATRX-214ENST00000624166 A0A1W2PQ67 120 aa11.46□□□□□ -0.57
ATRX-214ENST00000624166 HMX3A6NHT5 357 aa11.46□□□□□ -0.57
ATRX-214ENST00000624166 SLC16A6O15403 523 aa11.46□□□□□ -0.57
ATRX-214ENST00000624166 AKAP8O43823 692 aaKnown RBP11.46□□□□□ -0.57
ATRX-214ENST00000624166 ARHGEF15O94989 841 aa11.46□□□□□ -0.57
ATRX-214ENST00000624166 LRG1P02750 347 aa11.46□□□□□ -0.57
ATRX-214ENST00000624166 HLA-DPB1P04440 258 aa11.46□□□□□ -0.57
ATRX-214ENST00000624166 CA5AP35218 305 aa11.46□□□□□ -0.57
ATRX-214ENST00000624166 BLVRAP53004 296 aa11.46□□□□□ -0.57
ATRX-214ENST00000624166 PPP3R1P63098 170 aa11.46□□□□□ -0.57
ATRX-214ENST00000624166 SMAD3P84022 425 aaKnown RBP11.46□□□□□ -0.57
ATRX-214ENST00000624166 SETMARQ53H47 684 aaPredicted RBP11.46□□□□□ -0.57
ATRX-214ENST00000624166 SPIN4Q56A73 249 aa11.46□□□□□ -0.57
ATRX-214ENST00000624166 B3GNT8Q7Z7M8 397 aa11.46□□□□□ -0.57
ATRX-214ENST00000624166 ZNF557Q8N988 423 aaPredicted RBP11.46□□□□□ -0.57
ATRX-214ENST00000624166 GDPD1Q8N9F7 314 aa11.46□□□□□ -0.57
ATRX-214ENST00000624166 USP7Q93009 1102 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms