RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 MAP2K7O14733 419 aa18.04■□□□□ 0.48
CDX1-202ENST00000616154 NDC80O14777 642 aa18.04■□□□□ 0.48
CDX1-202ENST00000616154 ZGLP1P0C6A0 271 aa18.04■□□□□ 0.48
CDX1-202ENST00000616154 EDN3P14138 238 aa18.04■□□□□ 0.48
CDX1-202ENST00000616154 CMPK1P30085 196 aa18.04■□□□□ 0.48
CDX1-202ENST00000616154 EMP3P54852 163 aa18.04■□□□□ 0.48
CDX1-202ENST00000616154 CDC16Q13042 620 aa18.04■□□□□ 0.48
CDX1-202ENST00000616154 MFAP5Q13361 173 aa18.04■□□□□ 0.48
CDX1-202ENST00000616154 FASTKQ14296 549 aaKnown RBP18.04■□□□□ 0.48
CDX1-202ENST00000616154 FRG1Q14331 258 aaKnown RBP18.04■□□□□ 0.48
CDX1-202ENST00000616154 MUM1Q2TAK8 710 aa18.04■□□□□ 0.48
CDX1-202ENST00000616154 PRTGQ2VWP7 1150 aa18.04■□□□□ 0.48
CDX1-202ENST00000616154 STEAP4Q687X5 459 aa18.04■□□□□ 0.48
CDX1-202ENST00000616154 IGDCC3Q8IVU1 814 aa18.04■□□□□ 0.48
CDX1-202ENST00000616154 EIF1ADQ8N9N8 165 aaKnown RBP18.04■□□□□ 0.48
CDX1-202ENST00000616154 OR9A1PQ8NGU1 263 aa18.04■□□□□ 0.48
CDX1-202ENST00000616154 CD200R1Q8TD46 325 aa18.04■□□□□ 0.48
CDX1-202ENST00000616154 FAR1Q8WVX9 515 aa18.04■□□□□ 0.48
CDX1-202ENST00000616154 FAM136AQ96C01 138 aa18.04■□□□□ 0.48
CDX1-202ENST00000616154 MIEF2Q96C03 454 aa18.04■□□□□ 0.48
CDX1-202ENST00000616154 CNDP1Q96KN2 507 aa18.04■□□□□ 0.48
CDX1-202ENST00000616154 C10orf90Q96M02 699 aa18.04■□□□□ 0.48
CDX1-202ENST00000616154 LMF1Q96S06 567 aa18.04■□□□□ 0.48
CDX1-202ENST00000616154 ZFYVE21Q9BQ24 234 aa18.04■□□□□ 0.48
CDX1-202ENST00000616154 MESP1Q9BRJ9 268 aa18.04■□□□□ 0.48
CDX1-202ENST00000616154 AARSD1Q9BTE6 412 aaKnown RBP18.04■□□□□ 0.48
CDX1-202ENST00000616154 FAM129AQ9BZQ8 928 aa18.04■□□□□ 0.48
CDX1-202ENST00000616154 FAM114A2Q9NRY5 505 aa18.04■□□□□ 0.48
CDX1-202ENST00000616154 C3orf18Q9UK00 162 aa18.04■□□□□ 0.48
CDX1-202ENST00000616154 SNX24Q9Y343 169 aa18.04■□□□□ 0.48
CDX1-202ENST00000616154 CPAMD8Q8IZJ3 1885 aa18.03■□□□□ 0.48
CDX1-202ENST00000616154 GFYI3L273 518 aa18.03■□□□□ 0.48
CDX1-202ENST00000616154 CTIFO43310 598 aaKnown RBP18.03■□□□□ 0.48
CDX1-202ENST00000616154 HAUS5O94927 633 aa18.03■□□□□ 0.48
CDX1-202ENST00000616154 EIF2S1P05198 315 aaKnown RBP18.03■□□□□ 0.48
CDX1-202ENST00000616154 RHOXF2BP0C7M4 288 aa18.03■□□□□ 0.48
CDX1-202ENST00000616154 MPC1LP0DKB6 136 aa18.03■□□□□ 0.48
CDX1-202ENST00000616154 ERVK-10P10266 1014 aa18.03■□□□□ 0.48
CDX1-202ENST00000616154 FBLP22087 321 aaKnown RBP18.03■□□□□ 0.48
CDX1-202ENST00000616154 GABRB3P28472 473 aa18.03■□□□□ 0.48
CDX1-202ENST00000616154 YBX1P67809 324 aaKnown RBP18.03■□□□□ 0.48
CDX1-202ENST00000616154 MPP1Q00013 466 aa18.03■□□□□ 0.48
CDX1-202ENST00000616154 GUCY2DQ02846 1103 aa18.03■□□□□ 0.48
CDX1-202ENST00000616154 TRADDQ15628 312 aa18.03■□□□□ 0.48
CDX1-202ENST00000616154 ATG9BQ674R7 924 aa18.03■□□□□ 0.48
CDX1-202ENST00000616154 FBXO42Q6P3S6 717 aa18.03■□□□□ 0.48
CDX1-202ENST00000616154 CYHR1Q6ZMK1 362 aa18.03■□□□□ 0.48
CDX1-202ENST00000616154 PDIK1LQ8N165 341 aa18.03■□□□□ 0.48
CDX1-202ENST00000616154 BBOF1Q8ND07 529 aa18.03■□□□□ 0.48
CDX1-202ENST00000616154 GABPB2Q8TAK5 448 aaPredicted RBP18.03■□□□□ 0.48
CDX1-202ENST00000616154 ASB11Q8WXH4 323 aa18.03■□□□□ 0.48
CDX1-202ENST00000616154 RHOXF2Q9BQY4 288 aa18.03■□□□□ 0.48
CDX1-202ENST00000616154 DPH7Q9BTV6 452 aa18.03■□□□□ 0.48
CDX1-202ENST00000616154 CCDC68Q9H2F9 335 aa18.03■□□□□ 0.48
CDX1-202ENST00000616154 ZNF160Q9HCG1 818 aa18.03■□□□□ 0.48
CDX1-202ENST00000616154 ZDHHC18Q9NUE0 388 aa18.03■□□□□ 0.48
CDX1-202ENST00000616154 TEX264Q9Y6I9 313 aa18.03■□□□□ 0.48
CDX1-202ENST00000616154 LRBAP50851 2863 aa18.03■□□□□ 0.48
CDX1-202ENST00000616154 A0A1W2PQ72 361 aa18.02■□□□□ 0.48
CDX1-202ENST00000616154 H0YGG7 62 aa18.02■□□□□ 0.48
CDX1-202ENST00000616154 VPS26AO75436 327 aa18.02■□□□□ 0.48
CDX1-202ENST00000616154 BANF1O75531 89 aa18.02■□□□□ 0.48
CDX1-202ENST00000616154 KLHL18O94889 574 aa18.02■□□□□ 0.48
CDX1-202ENST00000616154 CATP04040 527 aaKnown RBP18.02■□□□□ 0.48
CDX1-202ENST00000616154 F7P08709 466 aaPredicted RBP18.02■□□□□ 0.48
CDX1-202ENST00000616154 TNFRSF8P28908 595 aa18.02■□□□□ 0.48
CDX1-202ENST00000616154 HSD17B2P37059 387 aa18.02■□□□□ 0.48
CDX1-202ENST00000616154 SKIV2L2P42285 1042 aaKnown RBP18.02■□□□□ 0.48
CDX1-202ENST00000616154 ARF3P61204 181 aaPredicted RBP18.02■□□□□ 0.48
CDX1-202ENST00000616154 TIAL1Q01085 375 aaKnown RBP eCLIP18.02■□□□□ 0.48
CDX1-202ENST00000616154 DSG2Q14126 1118 aa18.02■□□□□ 0.48
CDX1-202ENST00000616154 ERCC6LQ2NKX8 1250 aa18.02■□□□□ 0.48
CDX1-202ENST00000616154 RPUSD3Q6P087 351 aaKnown RBP18.02■□□□□ 0.48
CDX1-202ENST00000616154 ZDHHC24Q6UX98 284 aa18.02■□□□□ 0.48
CDX1-202ENST00000616154 LINC00696Q6ZRV3 163 aa18.02■□□□□ 0.48
CDX1-202ENST00000616154 KBTBD2Q8IY47 623 aa18.02■□□□□ 0.48
CDX1-202ENST00000616154 PRSS58Q8IYP2 241 aa18.02■□□□□ 0.48
CDX1-202ENST00000616154 SMPDL3AQ92484 453 aa18.02■□□□□ 0.48
CDX1-202ENST00000616154 C8orf44Q96CB5 159 aa18.02■□□□□ 0.48
CDX1-202ENST00000616154 MVB12AQ96EY5 273 aa18.02■□□□□ 0.48
CDX1-202ENST00000616154 CERS2Q96G23 380 aa18.02■□□□□ 0.48
CDX1-202ENST00000616154 CABS1Q96KC9 395 aa18.02■□□□□ 0.48
CDX1-202ENST00000616154 GPR21Q99679 349 aa18.02■□□□□ 0.48
CDX1-202ENST00000616154 ACAT2Q9BWD1 397 aa18.02■□□□□ 0.48
CDX1-202ENST00000616154 TRIM31Q9BZY9 425 aa18.02■□□□□ 0.48
CDX1-202ENST00000616154 IARS2Q9NSE4 1012 aaKnown RBP18.02■□□□□ 0.48
CDX1-202ENST00000616154 STOX2Q9P2F5 926 aaPredicted RBP18.02■□□□□ 0.48
CDX1-202ENST00000616154 TSR3Q9UJK0 312 aaKnown RBP18.02■□□□□ 0.48
CDX1-202ENST00000616154 CDC14AQ9UNH5 594 aa18.02■□□□□ 0.48
CDX1-202ENST00000616154 ABCA12Q86UK0 2595 aa18.02■□□□□ 0.48
CDX1-202ENST00000616154 ESYT3A0FGR9 886 aa18.01■□□□□ 0.47
CDX1-202ENST00000616154 E7ESA3 106 aa18.01■□□□□ 0.47
CDX1-202ENST00000616154 PRPF4O43172 522 aaKnown RBP eCLIP18.01■□□□□ 0.47
CDX1-202ENST00000616154 COX6A1P12074 109 aa18.01■□□□□ 0.47
CDX1-202ENST00000616154 FDXRP22570 491 aa18.01■□□□□ 0.47
CDX1-202ENST00000616154 ECHS1P30084 290 aa18.01■□□□□ 0.47
CDX1-202ENST00000616154 ITGA8P53708 1063 aa18.01■□□□□ 0.47
CDX1-202ENST00000616154 PER3P56645 1201 aa18.01■□□□□ 0.47
CDX1-202ENST00000616154 CAV1Q03135 178 aa18.01■□□□□ 0.47
CDX1-202ENST00000616154 CUL1Q13616 776 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms