RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 FAM46DQ8NEK8 389 aa13.83□□□□□ -0.2
ZNF548-212ENST00000602086 OR2L3Q8NG85 312 aa13.83□□□□□ -0.2
ZNF548-212ENST00000602086 HUS1BQ8NHY5 278 aa13.83□□□□□ -0.2
ZNF548-212ENST00000602086 C11orf24Q96F05 449 aaPredicted RBP13.83□□□□□ -0.2
ZNF548-212ENST00000602086 SERPINI1Q99574 410 aa13.83□□□□□ -0.2
ZNF548-212ENST00000602086 MMADHCQ9H3L0 296 aaPredicted RBP13.83□□□□□ -0.2
ZNF548-212ENST00000602086 XKR8Q9H6D3 395 aa13.83□□□□□ -0.2
ZNF548-212ENST00000602086 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.83□□□□□ -0.2
ZNF548-212ENST00000602086 NDE1Q9NXR1 346 aa13.83□□□□□ -0.2
ZNF548-212ENST00000602086 TAS2R1Q9NYW7 299 aa13.83□□□□□ -0.2
ZNF548-212ENST00000602086 GIMAP2Q9UG22 337 aa13.83□□□□□ -0.2
ZNF548-212ENST00000602086 SNX7Q9UNH6 387 aa13.83□□□□□ -0.2
ZNF548-212ENST00000602086 RRP15Q9Y3B9 282 aaKnown RBP13.83□□□□□ -0.2
ZNF548-212ENST00000602086 PCDHGA2Q9Y5H1 932 aa13.83□□□□□ -0.2
ZNF548-212ENST00000602086 GON4LQ3T8J9 2241 aa13.83□□□□□ -0.2
ZNF548-212ENST00000602086 PRAMEF33A0A0G2JMD5 474 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 TRBC2A0A5B9 178 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 B2RBV5 119 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 ANKRD28O15084 1053 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 YY2O15391 372 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 TNFSF14O43557 240 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 DFNA5O60443 496 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 SEC22BO75396 215 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 SLC22A3O75751 556 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 SEMA3DO95025 777 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 SNRPB2P08579 225 aaKnown RBP13.82□□□□□ -0.2
ZNF548-212ENST00000602086 AMD1P17707 334 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 JAK1P23458 1154 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 PTX3P26022 381 aaPredicted RBP13.82□□□□□ -0.2
ZNF548-212ENST00000602086 PEBP1P30086 187 aaKnown RBP13.82□□□□□ -0.2
ZNF548-212ENST00000602086 DHPSP49366 369 aaPredicted RBP13.82□□□□□ -0.2
ZNF548-212ENST00000602086 NEK2P51955 445 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 ARFIP1P53367 373 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 CSNK1G2P78368 415 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 HMGCS1Q01581 520 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 C1orf61Q13536 156 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 CUL3Q13618 768 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 AGKQ53H12 422 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 SPIN4Q56A73 249 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 SGO1Q5FBB7 561 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 IL23RQ5VWK5 629 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 ZNF425Q6IV72 752 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 GALNT18Q6P9A2 607 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 LAYNQ6UX15 382 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 SNX32Q86XE0 403 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 FUNDC1Q8IVP5 155 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 OR4E2Q8NGC2 313 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 LMX1AQ8TE12 382 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 MARK4Q96L34 752 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 HBEGFQ99075 208 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 ACAT2Q9BWD1 397 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.82□□□□□ -0.2
ZNF548-212ENST00000602086 EFCAB1Q9HAE3 211 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 MRPS30Q9NP92 439 aaKnown RBP13.82□□□□□ -0.2
ZNF548-212ENST00000602086 DMRT3Q9NQL9 472 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 ZSCAN32Q9NX65 697 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 G3BP2Q9UN86 482 aaKnown RBP13.82□□□□□ -0.2
ZNF548-212ENST00000602086 DOLKQ9UPQ8 538 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 MAPRE3Q9UPY8 281 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 RUVBL1Q9Y265 456 aaKnown RBP13.82□□□□□ -0.2
ZNF548-212ENST00000602086 CACNA1EQ15878 2313 aa13.82□□□□□ -0.2
ZNF548-212ENST00000602086 A0A1B0GVT2 93 aa13.81□□□□□ -0.2
ZNF548-212ENST00000602086 LILRA5A6NI73 299 aa13.81□□□□□ -0.2
ZNF548-212ENST00000602086 MAGEB17A8MXT2 336 aa13.81□□□□□ -0.2
ZNF548-212ENST00000602086 BTN3A3O00478 584 aa13.81□□□□□ -0.2
ZNF548-212ENST00000602086 YKT6O15498 198 aa13.81□□□□□ -0.2
ZNF548-212ENST00000602086 HRO43593 1189 aa13.81□□□□□ -0.2
ZNF548-212ENST00000602086 NOBOXO60393 691 aa13.81□□□□□ -0.2
ZNF548-212ENST00000602086 PRMT3O60678 531 aa13.81□□□□□ -0.2
ZNF548-212ENST00000602086 LMNAP02545 664 aaKnown RBP13.81□□□□□ -0.2
ZNF548-212ENST00000602086 ANXA6P08133 673 aa13.81□□□□□ -0.2
ZNF548-212ENST00000602086 PCNAP12004 261 aa13.81□□□□□ -0.2
ZNF548-212ENST00000602086 PSMB5P28074 263 aa13.81□□□□□ -0.2
ZNF548-212ENST00000602086 GRK3P35626 688 aa13.81□□□□□ -0.2
ZNF548-212ENST00000602086 AHRP35869 848 aa13.81□□□□□ -0.2
ZNF548-212ENST00000602086 CPOXP36551 454 aa13.81□□□□□ -0.2
ZNF548-212ENST00000602086 ARRB1P49407 418 aaPredicted RBP13.81□□□□□ -0.2
ZNF548-212ENST00000602086 C21orf58P58505 322 aa13.81□□□□□ -0.2
ZNF548-212ENST00000602086 RPL38P63173 70 aaKnown RBP13.81□□□□□ -0.2
ZNF548-212ENST00000602086 HHEXQ03014 270 aa13.81□□□□□ -0.2
ZNF548-212ENST00000602086 PLCL1Q15111 1095 aa13.81□□□□□ -0.2
ZNF548-212ENST00000602086 SLC5A12Q1EHB4 618 aa13.81□□□□□ -0.2
ZNF548-212ENST00000602086 BLOC1S3Q6QNY0 202 aa13.81□□□□□ -0.2
ZNF548-212ENST00000602086 CYP20A1Q6UW02 462 aa13.81□□□□□ -0.2
ZNF548-212ENST00000602086 HACD2Q6Y1H2 254 aa13.81□□□□□ -0.2
ZNF548-212ENST00000602086 ARMCX6Q7L4S7 300 aa13.81□□□□□ -0.2
ZNF548-212ENST00000602086 SYT12Q8IV01 421 aa13.81□□□□□ -0.2
ZNF548-212ENST00000602086 C2orf73Q8N5S3 287 aaPredicted RBP13.81□□□□□ -0.2
ZNF548-212ENST00000602086 ZBTB44Q8NCP5 570 aa13.81□□□□□ -0.2
ZNF548-212ENST00000602086 RBM15BQ8NDT2 890 aaKnown RBP13.81□□□□□ -0.2
ZNF548-212ENST00000602086 FLVCR1-AS1Q8TAF5 88 aa13.81□□□□□ -0.2
ZNF548-212ENST00000602086 CEP76Q8TAP6 659 aa13.81□□□□□ -0.2
ZNF548-212ENST00000602086 CHTF18Q8WVB6 975 aa13.81□□□□□ -0.2
ZNF548-212ENST00000602086 MTFMTQ96DP5 389 aaKnown RBP13.81□□□□□ -0.2
ZNF548-212ENST00000602086 RAB3IPQ96QF0 476 aaPredicted RBP13.81□□□□□ -0.2
ZNF548-212ENST00000602086 ELF4Q99607 663 aaPredicted RBP13.81□□□□□ -0.2
ZNF548-212ENST00000602086 SPNS1Q9H2V7 528 aa13.81□□□□□ -0.2
ZNF548-212ENST00000602086 CUEDC1Q9NWM3 386 aaPredicted RBP13.81□□□□□ -0.2
ZNF548-212ENST00000602086 SPHK1Q9NYA1 384 aa13.81□□□□□ -0.2
ZNF548-212ENST00000602086 NDUFAF1Q9Y375 327 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms