RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 PLD3Q8IV08 490 aa17.29■□□□□ 0.36
CIRBP-238ENST00000592412 BEST3Q8N1M1 668 aa17.29■□□□□ 0.36
CIRBP-238ENST00000592412 PPFIBP2Q8ND30 876 aa17.29■□□□□ 0.36
CIRBP-238ENST00000592412 MDS2Q8NDY4 140 aa17.29■□□□□ 0.36
CIRBP-238ENST00000592412 SUN3Q8TAQ9 357 aa17.29■□□□□ 0.36
CIRBP-238ENST00000592412 C1orf54Q8WWF1 131 aa17.29■□□□□ 0.36
CIRBP-238ENST00000592412 SIGLEC12Q96PQ1 595 aa17.29■□□□□ 0.36
CIRBP-238ENST00000592412 PKP4Q99569 1192 aa17.29■□□□□ 0.36
CIRBP-238ENST00000592412 PCYOX1Q9UHG3 505 aa17.29■□□□□ 0.36
CIRBP-238ENST00000592412 SCN2AQ99250 2005 aa17.29■□□□□ 0.36
CIRBP-238ENST00000592412 OR2W5A6NFC9 320 aa17.28■□□□□ 0.36
CIRBP-238ENST00000592412 MAN1A2O60476 641 aa17.28■□□□□ 0.36
CIRBP-238ENST00000592412 STATHP02808 62 aa17.28■□□□□ 0.36
CIRBP-238ENST00000592412 EZRP15311 586 aaKnown RBP17.28■□□□□ 0.36
CIRBP-238ENST00000592412 AGAP20933 346 aa17.28■□□□□ 0.36
CIRBP-238ENST00000592412 FMO4P31512 558 aa17.28■□□□□ 0.36
CIRBP-238ENST00000592412 RPL22P35268 128 aaKnown RBP17.28■□□□□ 0.36
CIRBP-238ENST00000592412 RBPJQ06330 500 aa17.28■□□□□ 0.36
CIRBP-238ENST00000592412 TUBA3CQ13748 450 aa17.28■□□□□ 0.36
CIRBP-238ENST00000592412 FAM53BQ14153 422 aa17.28■□□□□ 0.36
CIRBP-238ENST00000592412 KCNJ11Q14654 390 aa17.28■□□□□ 0.36
CIRBP-238ENST00000592412 ARHGAP19Q14CB8 494 aa17.28■□□□□ 0.36
CIRBP-238ENST00000592412 TYSND1Q2T9J0 566 aa17.28■□□□□ 0.36
CIRBP-238ENST00000592412 TUBA3EQ6PEY2 450 aa17.28■□□□□ 0.36
CIRBP-238ENST00000592412 CES3Q6UWW8 571 aa17.28■□□□□ 0.36
CIRBP-238ENST00000592412 Q6ZPB1 254 aaPredicted RBP17.28■□□□□ 0.36
CIRBP-238ENST00000592412 LRRC56Q8IYG6 542 aaPredicted RBP17.28■□□□□ 0.36
CIRBP-238ENST00000592412 OR9A4Q8NGU2 314 aa17.28■□□□□ 0.36
CIRBP-238ENST00000592412 ZNF480Q8WV37 535 aa17.28■□□□□ 0.36
CIRBP-238ENST00000592412 MFSD3Q96ES6 412 aa17.28■□□□□ 0.36
CIRBP-238ENST00000592412 GPR137Q96N19 417 aa17.28■□□□□ 0.36
CIRBP-238ENST00000592412 CYTH2Q99418 400 aa17.28■□□□□ 0.36
CIRBP-238ENST00000592412 ITGB1BP2Q9UKP3 347 aa17.28■□□□□ 0.36
CIRBP-238ENST00000592412 ZNF148Q9UQR1 794 aa17.28■□□□□ 0.36
CIRBP-238ENST00000592412 PCDHGB6Q9Y5F9 930 aa17.28■□□□□ 0.36
CIRBP-238ENST00000592412 CAPN6Q9Y6Q1 641 aa17.28■□□□□ 0.36
CIRBP-238ENST00000592412 MAP1AP78559 2803 aaPredicted RBP17.28■□□□□ 0.36
CIRBP-238ENST00000592412 A8MUI8 341 aa17.27■□□□□ 0.36
CIRBP-238ENST00000592412 E7ENX8 843 aa17.27■□□□□ 0.36
CIRBP-238ENST00000592412 ZNHIT1O43257 154 aa17.27■□□□□ 0.36
CIRBP-238ENST00000592412 IPO7O95373 1038 aaKnown RBP17.27■□□□□ 0.36
CIRBP-238ENST00000592412 SLC16A8O95907 504 aa17.27■□□□□ 0.36
CIRBP-238ENST00000592412 PNLIPRP1P54315 467 aa17.27■□□□□ 0.36
CIRBP-238ENST00000592412 AP2B1P63010 937 aa17.27■□□□□ 0.36
CIRBP-238ENST00000592412 TAP2Q03519 686 aa17.27■□□□□ 0.36
CIRBP-238ENST00000592412 RELAQ04206 551 aa17.27■□□□□ 0.36
CIRBP-238ENST00000592412 TSTA3Q13630 321 aaPredicted RBP17.27■□□□□ 0.36
CIRBP-238ENST00000592412 KLHL38Q2WGJ6 581 aa17.27■□□□□ 0.36
CIRBP-238ENST00000592412 ACER2Q5QJU3 275 aa17.27■□□□□ 0.36
CIRBP-238ENST00000592412 PLAG1Q6DJT9 500 aa17.27■□□□□ 0.36
CIRBP-238ENST00000592412 VN1R4Q7Z5H5 301 aa17.27■□□□□ 0.36
CIRBP-238ENST00000592412 CHERPQ8IWX8 916 aaKnown RBP17.27■□□□□ 0.36
CIRBP-238ENST00000592412 SYCE1Q8N0S2 351 aa17.27■□□□□ 0.36
CIRBP-238ENST00000592412 THAP3Q8WTV1 239 aaPredicted RBP17.27■□□□□ 0.36
CIRBP-238ENST00000592412 SLC30A3Q99726 388 aa17.27■□□□□ 0.36
CIRBP-238ENST00000592412 TSPAN10Q9H1Z9 355 aaPredicted RBP17.27■□□□□ 0.36
CIRBP-238ENST00000592412 PAK5Q9P286 719 aa17.27■□□□□ 0.36
CIRBP-238ENST00000592412 MED13LQ71F56 2210 aa17.27■□□□□ 0.35
CIRBP-238ENST00000592412 ASPDHA6ND91 283 aa17.26■□□□□ 0.35
CIRBP-238ENST00000592412 VAPBO95292 243 aa17.26■□□□□ 0.35
CIRBP-238ENST00000592412 SNX1Q13596 522 aa17.26■□□□□ 0.35
CIRBP-238ENST00000592412 LONRF1Q17RB8 773 aa17.26■□□□□ 0.35
CIRBP-238ENST00000592412 KCTD19Q17RG1 926 aaPredicted RBP17.26■□□□□ 0.35
CIRBP-238ENST00000592412 BTBD16Q32M84 506 aa17.26■□□□□ 0.35
CIRBP-238ENST00000592412 CPEB2Q7Z5Q1 589 aaKnown RBP17.26■□□□□ 0.35
CIRBP-238ENST00000592412 TMEM139Q8IV31 216 aa17.26■□□□□ 0.35
CIRBP-238ENST00000592412 SIAH3Q8IW03 269 aa17.26■□□□□ 0.35
CIRBP-238ENST00000592412 ACBD4Q8NC06 268 aa17.26■□□□□ 0.35
CIRBP-238ENST00000592412 GIMAP7Q8NHV1 300 aa17.26■□□□□ 0.35
CIRBP-238ENST00000592412 RERGQ96A58 199 aaPredicted RBP17.26■□□□□ 0.35
CIRBP-238ENST00000592412 MTFMTQ96DP5 389 aaKnown RBP17.26■□□□□ 0.35
CIRBP-238ENST00000592412 SCMH1Q96GD3 660 aa17.26■□□□□ 0.35
CIRBP-238ENST00000592412 KIFC1Q9BW19 673 aa17.26■□□□□ 0.35
CIRBP-238ENST00000592412 FRMD8P1Q9BZ68 369 aaPredicted RBP17.26■□□□□ 0.35
CIRBP-238ENST00000592412 IL22Q9GZX6 179 aa17.26■□□□□ 0.35
CIRBP-238ENST00000592412 EIF2B3Q9NR50 452 aaKnown RBP17.26■□□□□ 0.35
CIRBP-238ENST00000592412 SYBUQ9NX95 663 aa17.26■□□□□ 0.35
CIRBP-238ENST00000592412 ANKRD10Q9NXR5 420 aa17.26■□□□□ 0.35
CIRBP-238ENST00000592412 TEKT2Q9UIF3 430 aa17.26■□□□□ 0.35
CIRBP-238ENST00000592412 CRYL1Q9Y2S2 319 aa17.26■□□□□ 0.35
CIRBP-238ENST00000592412 MED16Q9Y2X0 877 aa17.26■□□□□ 0.35
CIRBP-238ENST00000592412 MEMO1Q9Y316 297 aa17.26■□□□□ 0.35
CIRBP-238ENST00000592412 ZNF469Q96JG9 3925 aaPredicted RBP17.26■□□□□ 0.35
CIRBP-238ENST00000592412 CLDN14O95500 239 aa17.25■□□□□ 0.35
CIRBP-238ENST00000592412 F7P08709 466 aaPredicted RBP17.25■□□□□ 0.35
CIRBP-238ENST00000592412 PKMP14618 531 aaKnown RBP17.25■□□□□ 0.35
CIRBP-238ENST00000592412 MGAT1P26572 445 aa17.25■□□□□ 0.35
CIRBP-238ENST00000592412 CD96P40200 585 aa17.25■□□□□ 0.35
CIRBP-238ENST00000592412 ADARP55265 1226 aaKnown RBP17.25■□□□□ 0.35
CIRBP-238ENST00000592412 SIX1Q15475 284 aaPredicted RBP17.25■□□□□ 0.35
CIRBP-238ENST00000592412 ANKRD37Q7Z713 158 aa17.25■□□□□ 0.35
CIRBP-238ENST00000592412 KIAA1328Q86T90 577 aa17.25■□□□□ 0.35
CIRBP-238ENST00000592412 SLC13A5Q86YT5 568 aaPredicted RBP17.25■□□□□ 0.35
CIRBP-238ENST00000592412 SPPL2CQ8IUH8 684 aa17.25■□□□□ 0.35
CIRBP-238ENST00000592412 CRLF3Q8IUI8 442 aa17.25■□□□□ 0.35
CIRBP-238ENST00000592412 REXO1L1PQ8IX06 675 aa17.25■□□□□ 0.35
CIRBP-238ENST00000592412 FRMD6Q96NE9 622 aa17.25■□□□□ 0.35
CIRBP-238ENST00000592412 MACROD1Q9BQ69 325 aa17.25■□□□□ 0.35
CIRBP-238ENST00000592412 KLHL1Q9NR64 748 aa17.25■□□□□ 0.35
CIRBP-238ENST00000592412 NIPBLQ6KC79 2804 aaeCLIP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms