RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 LAPTM4BQ86VI4 370 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 ZSCAN5AQ9BUG6 496 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 POLR2J3Q9H1A7 115 aaKnown RBP16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 FAIMQ9NVQ4 179 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 ZNF701M0R085 212 aaPredicted RBP16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 ACOX3O15254 700 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 SOCS5O75159 536 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 ATE1O95260 518 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 VIPR1P32241 457 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 PLA2G16P53816 162 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 UBE2J2Q8N2K1 259 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 BEND7Q8N7W2 519 aaPredicted RBP16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 AQP11Q8NBQ7 271 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 ZNF671Q8TAW3 534 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 RASSF5Q8WWW0 418 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 POLR2J2Q9GZM3 115 aaKnown RBP16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 UBR3Q6ZT12 1888 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 HPGDP15428 266 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 TLX1P31314 330 aaPredicted RBP16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 CLDN8P56748 225 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 RPP38P78345 283 aaKnown RBP16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 CAP1Q01518 475 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 SCN1BQ07699 218 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 CD47Q08722 323 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 FBXO43Q4G163 708 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 HMBOX1Q6NT76 420 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 OR4K1Q8NGD4 311 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 GAB3Q8WWW8 586 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 EFCAB11Q9BUY7 163 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 SMG9Q9H0W8 520 aaKnown RBP16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 CTPS2Q9NRF8 586 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 OLAHQ9NV23 265 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 ZNF451Q9Y4E5 1061 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 TLR4O00206 839 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 GPR39O43194 453 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 DNAJB5O75953 348 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 VIPP01282 170 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 BMP7P18075 431 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 STK19P49842 368 aaPredicted RBP16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 ING5Q8WYH8 240 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 INPP5KQ9BT40 448 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 C3orf14Q9HBI5 128 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 MAP10Q9P2G4 905 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 CFL2Q9Y281 166 aa16.6■□□□□ 0.25
SMARCA4-215ENST00000590574 A0A1W2PQ45 241 aaPredicted RBP16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 A0A1W2PQY0 241 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 SLC30A4O14863 429 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 KDELR2P33947 212 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 KCNC1P48547 511 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 NDUFA5Q16718 116 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 TYSND1Q2T9J0 566 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 C9orf43Q8TAL5 461 aaPredicted RBP16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 COL21A1Q96P44 957 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 RHCGQ9UBD6 479 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 SNX7Q9UNH6 387 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 SNX4O95219 450 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 PRG2P13727 222 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 BPIP17213 487 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 AGXTP21549 392 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 RORCP51449 518 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 XKP51811 444 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 BRAT1Q6PJG6 821 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 NANOGNBQ7Z5D8 188 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 FGD2Q7Z6J4 655 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 OR51B5Q9H339 312 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 CD300AQ9UGN4 299 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 IL36AQ9UHA7 158 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 TMA7Q9Y2S6 64 aaKnown RBP16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 PCDHA9Q9Y5H5 950 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 LTBP4Q8N2S1 1624 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 KRT87PA6NCN2 255 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 PI15O43692 258 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 BCHEP06276 602 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 SDC2P34741 201 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 RGRP47804 291 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 PSMD8P48556 350 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 CLCA4Q14CN2 919 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 MFSD4BQ5TF39 518 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 CHCHD4Q8N4Q1 142 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 PROKR1Q8TCW9 393 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 INSL5Q9Y5Q6 135 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 WNK3Q9BYP7 1800 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 MUSKO15146 869 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 PLOD3O60568 738 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 FGF19O95750 216 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 RPS3AP61247 264 aaKnown RBP16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 LMAN2Q12907 356 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 ZNF544Q6NX49 715 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 PLET1Q6UQ28 207 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 NEK10Q6ZWH5 1172 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 FUNDC1Q8IVP5 155 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 KREMEN2Q8NCW0 462 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 TMCO6Q96DC7 493 aa16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 RPRD1BQ9NQG5 326 aaKnown RBP16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 RPL36Q9Y3U8 105 aaKnown RBP16.59■□□□□ 0.25
SMARCA4-215ENST00000590574 FOCADQ5VW36 1801 aa16.58■□□□□ 0.25
SMARCA4-215ENST00000590574 INPPL1O15357 1258 aa16.58■□□□□ 0.25
SMARCA4-215ENST00000590574 ACADMP11310 421 aa16.58■□□□□ 0.25
SMARCA4-215ENST00000590574 ARL4DP49703 201 aa16.58■□□□□ 0.25
SMARCA4-215ENST00000590574 OR2B6P58173 313 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms