RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 CSE1LP55060 971 aaKnown RBP2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 IRX4P78413 519 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 RASGEF1BQ0VAM2 473 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 NONOQ15233 471 aaKnown RBP eCLIP2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 TAB1Q15750 504 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 FAM189A2Q15884 450 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 C9orf152Q5JTZ5 239 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 CFAP58Q5T655 872 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 WDR78Q5VTH9 848 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 SEL1L3Q68CR1 1132 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 KRT39Q6A163 491 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 GPR139Q6DWJ6 353 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 IL17RELQ6ZVW7 336 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 CHMP1BQ7LBR1 199 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 PLPPR4Q7Z2D5 763 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 MARCH9Q86YJ5 346 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 METTL4Q8N3J2 472 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 RASGEF1AQ8N9B8 481 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 POMGNT2Q8NAT1 580 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 METTL21AQ8WXB1 218 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 PIK3R3Q92569 461 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 PROX1Q92786 737 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 RPP25Q9BUL9 199 aaKnown RBP2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 TDRD1Q9BXT4 1180 aaKnown RBP2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 HOXD1Q9GZZ0 328 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 UBA5Q9GZZ9 404 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 PANK3Q9H999 370 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 MORF4L1Q9UBU8 362 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 PASKQ96RG2 1323 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 K7ENM7 598 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 CLDN4O14493 209 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 SNX3O60493 162 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 DIAPH2O60879 1101 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 RPS6KA5O75582 802 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 BAG3O95817 575 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 PRB2P02812 416 aaPredicted RBP2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 OR52Z1P0C646 297 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 THEGLP0DJG4 465 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 ELAVL4P26378 380 aaKnown RBP2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 ACSM1Q08AH1 577 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 SGCGQ13326 291 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 ERMARDQ5T6L9 678 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 CTR9Q6PD62 1173 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 GDPGP1Q6ZNW5 385 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 Q6ZVH6 145 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 SLC24A5Q71RS6 500 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 FCRLAQ7L513 359 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 ZER1Q7Z7L7 766 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 SLC34A3Q8N130 599 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 RYBPQ8N488 228 aaPredicted RBP2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 ANKRD13CQ8N6S4 541 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 Q8N7P7 452 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 LRTM2Q8N967 370 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 OR5T2Q8NGG2 359 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 LRRC15Q8TF66 581 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 CHPT1Q8WUD6 406 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 SLC45A3Q96JT2 553 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 GAL3ST4Q96RP7 486 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 OVOL2Q9BRP0 275 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 GNB4Q9HAV0 340 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 DNAJC4Q9NNZ3 241 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 GSN-AS1Q9NRJ2 163 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 TBC1D7Q9P0N9 293 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 TXNDC16Q9P2K2 825 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 CELA1Q9UNI1 258 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 PA2G4Q9UQ80 394 aaKnown RBP2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 WIPI2Q9Y4P8 454 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 SELENOKQ9Y6D0 94 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 IGSF1Q8N6C5 1336 aa2.64□□□□□ -1.99
SMCHD1-206ENST00000581631 ATRXP46100 2492 aa2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 LOC105371242A0A075B767 164 aa2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 A8MXK9 166 aa2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 C2CD4DB7Z1M9 353 aa2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 TFECO14948 347 aaPredicted RBP2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 ATP6AP2O75787 350 aa2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 CEACAM4O75871 244 aa2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 KRT33AO76009 404 aa2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 HPRP00739 348 aa2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 AKR1B1P15121 316 aa2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 BCL3P20749 454 aa2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 EEF1B2P24534 225 aaKnown RBP2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 OXTRP30559 389 aa2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 CLDN15P56746 228 aa2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 UBASH3AP57075 661 aa2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 DCDC1P59894 354 aa2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 DHODHQ02127 395 aa2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 OPCMLQ14982 345 aa2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 ARMC4Q5T2S8 1044 aa2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 OR4C11Q6IEV9 310 aa2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 LCLAT1Q6UWP7 414 aa2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 BRINP3Q76B58 766 aa2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 PRPF39Q86UA1 669 aaKnown RBP2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 TLK2Q86UE8 772 aa2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 SLC47A2Q86VL8 602 aa2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 FGFRL1Q8N441 504 aa2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 FAM89BQ8N5H3 189 aa2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 C9orf43Q8TAL5 461 aaPredicted RBP2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 TSACCQ96A04 125 aaPredicted RBP2.63□□□□□ -1.99
SMCHD1-206ENST00000581631 KLHL5Q96PQ7 755 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms