RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 ZMYND15Q9H091 742 aa11.66□□□□□ -0.54
CCDC84-209ENST00000580556 PCTPQ9UKL6 214 aa11.66□□□□□ -0.54
CCDC84-209ENST00000580556 ATXN7L1Q9ULK2 861 aaPredicted RBP11.66□□□□□ -0.54
CCDC84-209ENST00000580556 SLC22A14Q9Y267 594 aa11.66□□□□□ -0.54
CCDC84-209ENST00000580556 DYRK1BQ9Y463 629 aa11.66□□□□□ -0.54
CCDC84-209ENST00000580556 ASB1Q9Y576 335 aa11.66□□□□□ -0.54
CCDC84-209ENST00000580556 PCDHGA8Q9Y5G5 932 aa11.66□□□□□ -0.54
CCDC84-209ENST00000580556 FLNCQ14315 2725 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 IGHV5-10-1A0A0J9YXX1 117 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 HGSO14964 777 aaPredicted RBP11.65□□□□□ -0.54
CCDC84-209ENST00000580556 CCNT2O60583 730 aaKnown RBP11.65□□□□□ -0.54
CCDC84-209ENST00000580556 UGDHO60701 494 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 TRIM13O60858 407 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 SIX3O95343 332 aaPredicted RBP11.65□□□□□ -0.54
CCDC84-209ENST00000580556 ZBTB11O95625 1053 aaPredicted RBP11.65□□□□□ -0.54
CCDC84-209ENST00000580556 MSL3P1P0C860 447 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 EPORP19235 508 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 NR1D1P20393 614 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 SERPINB5P36952 375 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 CASP2P42575 452 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 GDF5P43026 501 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 PPM1FP49593 454 aaPredicted RBP11.65□□□□□ -0.54
CCDC84-209ENST00000580556 TSTA3Q13630 321 aaPredicted RBP11.65□□□□□ -0.54
CCDC84-209ENST00000580556 GTF2H2Q13888 395 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 TBCCQ15814 346 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 ZNF425Q6IV72 752 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 GTF2H2CQ6P1K8 395 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 FAM92BQ6ZTR7 304 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 TMPRSS9Q7Z410 1059 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 ARHGAP22Q7Z5H3 698 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 C10orf107Q8IVU9 208 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 OR6Y1Q8NGX8 325 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 SLC5A11Q8WWX8 675 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 KLHL6Q8WZ60 621 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 NEIL2Q969S2 332 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 ZUFSPQ96AP4 578 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 WDR34Q96EX3 536 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 SLC41A2Q96JW4 573 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 MAP3K3Q99759 626 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 SELENOSQ9BQE4 189 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 TRMOQ9BU70 441 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 ACAT2Q9BWD1 397 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 PITHD1Q9GZP4 211 aaPredicted RBP11.65□□□□□ -0.54
CCDC84-209ENST00000580556 ZNF768Q9H5H4 540 aaKnown RBP11.65□□□□□ -0.54
CCDC84-209ENST00000580556 SYNDIG1Q9H7V2 258 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 PELI2Q9HAT8 420 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 MRPS30Q9NP92 439 aaKnown RBP11.65□□□□□ -0.54
CCDC84-209ENST00000580556 BTRCQ9Y297 605 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 STK38LQ9Y2H1 464 aa11.65□□□□□ -0.54
CCDC84-209ENST00000580556 USP9XQ93008 2570 aaPredicted RBP11.64□□□□□ -0.55
CCDC84-209ENST00000580556 IGKV1-8A0A0C4DH67 115 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 OR2A25A4D2G3 310 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 H3BQF6 201 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 MAP3K7O43318 606 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 RASSF9O75901 435 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 SNUPNO95149 360 aaKnown RBP11.64□□□□□ -0.55
CCDC84-209ENST00000580556 MLYCDO95822 493 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 EZRP15311 586 aaKnown RBP11.64□□□□□ -0.55
CCDC84-209ENST00000580556 WT1P19544 449 aaPredicted RBP11.64□□□□□ -0.55
CCDC84-209ENST00000580556 CDH3P22223 829 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 ALDH3A1P30838 453 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 GRIA3P42263 894 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 CCR8P51685 355 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 INHBCP55103 352 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 WDR4P57081 412 aaKnown RBP11.64□□□□□ -0.55
CCDC84-209ENST00000580556 CYP4F2P78329 520 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 GALNT1Q10472 559 aaPredicted RBP11.64□□□□□ -0.55
CCDC84-209ENST00000580556 LCP2Q13094 533 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 UNC50Q53HI1 259 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 FBXO48Q5FWF7 155 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 HHATQ5VTY9 493 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 CACHD1Q5VU97 1274 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 ATG9BQ674R7 924 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 HIST2H2BCQ6DN03 193 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 FRMD7Q6ZUT3 714 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 GOLGA7Q7Z5G4 137 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 NUDCD3Q8IVD9 361 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 ARFGAP2Q8N6H7 521 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 TEX9Q8N6V9 391 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 ANKRD42Q8N9B4 389 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 C19orf47Q8N9M1 422 aaKnown RBP11.64□□□□□ -0.55
CCDC84-209ENST00000580556 SNX31Q8N9S9 440 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 OR4K1Q8NGD4 311 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 WDR36Q8NI36 951 aaKnown RBP11.64□□□□□ -0.55
CCDC84-209ENST00000580556 RAB3IL1Q8TBN0 382 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 ESAMQ96AP7 390 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 TCTN2Q96GX1 697 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 CCDC74BQ96LY2 380 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 MAGEB10Q96LZ2 347 aaPredicted RBP11.64□□□□□ -0.55
CCDC84-209ENST00000580556 TRAPPC9Q96Q05 1148 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 PLCD4Q9BRC7 762 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 MECRQ9BV79 373 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 SARGQ9BW04 601 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 SLC6A20Q9NP91 592 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 TMEM184CQ9NVA4 438 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 TMEM9Q9P0T7 183 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 SNX7Q9UNH6 387 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 ANGPTL3Q9Y5C1 460 aa11.64□□□□□ -0.55
CCDC84-209ENST00000580556 TLN1Q9Y490 2541 aaKnown RBP11.64□□□□□ -0.55
CCDC84-209ENST00000580556 IGHV5-51A0A0C4DH38 117 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms