RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	WDR83OS	Q9Y284	106 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	SELENOK	Q9Y6D0	94 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	KIF25-AS1	Q9Y6Z4	181 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	CASTOR2	A6NHX0	329 aa		2.57	□□□□□ -2
UBR1-209	ENST00000569243		A8MV72	311 aa	Predicted RBP	2.57	□□□□□ -2
UBR1-209	ENST00000569243	TRIM77	I1YAP6	450 aa		2.57	□□□□□ -2
UBR1-209	ENST00000569243		K7EQD1	137 aa		2.57	□□□□□ -2
UBR1-209	ENST00000569243	TRAFD1	O14545	582 aa	Predicted RBP	2.57	□□□□□ -2
UBR1-209	ENST00000569243	POP4	O95707	220 aa	Known RBP	2.57	□□□□□ -2
UBR1-209	ENST00000569243	HP	P00738	406 aa		2.57	□□□□□ -2
UBR1-209	ENST00000569243	CSN3	P07498	182 aa		2.57	□□□□□ -2
UBR1-209	ENST00000569243	NNMT	P40261	264 aa		2.57	□□□□□ -2
UBR1-209	ENST00000569243	CASP2	P42575	452 aa		2.57	□□□□□ -2
UBR1-209	ENST00000569243	DNA2	P51530	1060 aa		2.57	□□□□□ -2
UBR1-209	ENST00000569243	XG	P55808	180 aa		2.57	□□□□□ -2
UBR1-209	ENST00000569243	POU5F1	Q01860	360 aa	Known RBP	2.57	□□□□□ -2
UBR1-209	ENST00000569243	TRAP1	Q12931	704 aa	Known RBP	2.57	□□□□□ -2
UBR1-209	ENST00000569243	IL11RA	Q14626	422 aa		2.57	□□□□□ -2
UBR1-209	ENST00000569243	VWC2	Q2TAL6	325 aa		2.57	□□□□□ -2
UBR1-209	ENST00000569243	GPR33	Q49SQ1	333 aa		2.57	□□□□□ -2
UBR1-209	ENST00000569243	SLC25A42	Q86VD7	318 aa		2.57	□□□□□ -2
UBR1-209	ENST00000569243	RASGEF1A	Q8N9B8	481 aa		2.57	□□□□□ -2
UBR1-209	ENST00000569243	NOA1	Q8NC60	698 aa	Known RBP	2.57	□□□□□ -2
UBR1-209	ENST00000569243	OR7A2P	Q8NGA2	310 aa		2.57	□□□□□ -2
UBR1-209	ENST00000569243	CHURC1	Q8WUH1	139 aa		2.57	□□□□□ -2
UBR1-209	ENST00000569243	MUS81	Q96NY9	551 aa		2.57	□□□□□ -2
UBR1-209	ENST00000569243	GCNA	Q96QF7	691 aa		2.57	□□□□□ -2
UBR1-209	ENST00000569243	CHCHD5	Q9BSY4	110 aa		2.57	□□□□□ -2
UBR1-209	ENST00000569243	CPSF3	Q9UKF6	684 aa	Known RBP	2.57	□□□□□ -2
UBR1-209	ENST00000569243	PRDM4	Q9UKN5	801 aa		2.57	□□□□□ -2
UBR1-209	ENST00000569243	PCDHGB4	Q9UN71	923 aa		2.57	□□□□□ -2
UBR1-209	ENST00000569243	CHKB	Q9Y259	395 aa		2.57	□□□□□ -2
UBR1-209	ENST00000569243	RPS6KL1	Q9Y6S9	549 aa		2.57	□□□□□ -2
UBR1-209	ENST00000569243		R4GN57	208 aa		2.57	□□□□□ -2
UBR1-209	ENST00000569243	IGSF1	Q8N6C5	1336 aa		2.57	□□□□□ -2
UBR1-209	ENST00000569243	IGKV6D-21	A0A0A0MT36	114 aa		2.56	□□□□□ -2
UBR1-209	ENST00000569243	TRAV24	A0A0B4J272	114 aa		2.56	□□□□□ -2
UBR1-209	ENST00000569243		A0A1W2PPK0	400 aa		2.56	□□□□□ -2
UBR1-209	ENST00000569243	SNURFL	B1AK76	121 aa		2.56	□□□□□ -2
UBR1-209	ENST00000569243	ADAM20	O43506	726 aa		2.56	□□□□□ -2
UBR1-209	ENST00000569243	SNAP91	O60641	907 aa		2.56	□□□□□ -2
UBR1-209	ENST00000569243	ATP1B1	P05026	303 aa		2.56	□□□□□ -2
UBR1-209	ENST00000569243	MELTF	P08582	738 aa		2.56	□□□□□ -2
UBR1-209	ENST00000569243	CD22	P20273	847 aa		2.56	□□□□□ -2
UBR1-209	ENST00000569243	EEF1B2	P24534	225 aa	Known RBP	2.56	□□□□□ -2
UBR1-209	ENST00000569243	ELAVL4	P26378	380 aa	Known RBP	2.56	□□□□□ -2
UBR1-209	ENST00000569243	PCGF2	P35227	344 aa		2.56	□□□□□ -2
UBR1-209	ENST00000569243	ETV5	P41161	510 aa		2.56	□□□□□ -2
UBR1-209	ENST00000569243	CCR3	P51677	355 aa		2.56	□□□□□ -2
UBR1-209	ENST00000569243	SNTB1	Q13884	538 aa	Known RBP	2.56	□□□□□ -2
UBR1-209	ENST00000569243	VEZF1	Q14119	521 aa		2.56	□□□□□ -2
UBR1-209	ENST00000569243	CAPRIN1	Q14444	709 aa	Known RBP	2.56	□□□□□ -2
UBR1-209	ENST00000569243	PRR30	Q53SZ7	412 aa	Predicted RBP	2.56	□□□□□ -2
UBR1-209	ENST00000569243	SPECC1	Q5M775	1068 aa		2.56	□□□□□ -2
UBR1-209	ENST00000569243	DET1	Q7L5Y6	550 aa		2.56	□□□□□ -2
UBR1-209	ENST00000569243	CHMP1B	Q7LBR1	199 aa		2.56	□□□□□ -2
UBR1-209	ENST00000569243	PRPF39	Q86UA1	669 aa	Known RBP	2.56	□□□□□ -2
UBR1-209	ENST00000569243	TC2N	Q8N9U0	490 aa		2.56	□□□□□ -2
UBR1-209	ENST00000569243	OR10G7	Q8NGN6	311 aa		2.56	□□□□□ -2
UBR1-209	ENST00000569243	ATP8B4	Q8TF62	1192 aa		2.56	□□□□□ -2
UBR1-209	ENST00000569243	PIK3R3	Q92569	461 aa		2.56	□□□□□ -2
UBR1-209	ENST00000569243	FAM218A	Q96MZ4	157 aa		2.56	□□□□□ -2
UBR1-209	ENST00000569243	FEV	Q99581	238 aa		2.56	□□□□□ -2
UBR1-209	ENST00000569243	CDCA3	Q99618	268 aa	Predicted RBP	2.56	□□□□□ -2
UBR1-209	ENST00000569243	CCDC106	Q9BWC9	280 aa		2.56	□□□□□ -2
UBR1-209	ENST00000569243	GOLPH3L	Q9H4A5	285 aa		2.56	□□□□□ -2
UBR1-209	ENST00000569243	GSN-AS1	Q9NRJ2	163 aa		2.56	□□□□□ -2
UBR1-209	ENST00000569243	THAP10	Q9P2Z0	257 aa	Predicted RBP	2.56	□□□□□ -2
UBR1-209	ENST00000569243	LNPEP	Q9UIQ6	1025 aa		2.56	□□□□□ -2
UBR1-209	ENST00000569243	IGLV4-3	A0A075B6K6	122 aa		2.55	□□□□□ -2
UBR1-209	ENST00000569243	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	2.55	□□□□□ -2
UBR1-209	ENST00000569243	EDDM13	A0A1B0GTR0	161 aa		2.55	□□□□□ -2
UBR1-209	ENST00000569243	hCG_1809904	A0A1W2PP81	198 aa		2.55	□□□□□ -2
UBR1-209	ENST00000569243		A0A1W2PPE2	198 aa		2.55	□□□□□ -2
UBR1-209	ENST00000569243		A0A1W2PR64	198 aa		2.55	□□□□□ -2
UBR1-209	ENST00000569243	TRIM49B	A6NDI0	452 aa		2.55	□□□□□ -2
UBR1-209	ENST00000569243	CLDN4	O14493	209 aa		2.55	□□□□□ -2
UBR1-209	ENST00000569243	GALR3	O60755	368 aa	Predicted RBP	2.55	□□□□□ -2
UBR1-209	ENST00000569243	ATP5B	P06576	529 aa	Known RBP	2.55	□□□□□ -2
UBR1-209	ENST00000569243	EDNRA	P25101	427 aa		2.55	□□□□□ -2
UBR1-209	ENST00000569243	SOX3	P41225	446 aa		2.55	□□□□□ -2
UBR1-209	ENST00000569243	CD300C	Q08708	224 aa		2.55	□□□□□ -2
UBR1-209	ENST00000569243	ZNF177	Q13360	481 aa	Predicted RBP	2.55	□□□□□ -2
UBR1-209	ENST00000569243	TRA2A	Q13595	282 aa	Known RBP eCLIP	2.55	□□□□□ -2
UBR1-209	ENST00000569243	ALCAM	Q13740	583 aa		2.55	□□□□□ -2
UBR1-209	ENST00000569243	EIPR1	Q53HC9	387 aa		2.55	□□□□□ -2
UBR1-209	ENST00000569243	PP632	Q6XCG6	107 aa		2.55	□□□□□ -2
UBR1-209	ENST00000569243	CAMKMT	Q7Z624	323 aa		2.55	□□□□□ -2
UBR1-209	ENST00000569243	GPC2	Q8N158	579 aa		2.55	□□□□□ -2
UBR1-209	ENST00000569243	AVL9	Q8NBF6	648 aa		2.55	□□□□□ -2
UBR1-209	ENST00000569243	OR4D10	Q8NGI6	311 aa		2.55	□□□□□ -2
UBR1-209	ENST00000569243	CNOT6L	Q96LI5	555 aa	Known RBP	2.55	□□□□□ -2
UBR1-209	ENST00000569243	ABHD1	Q96SE0	405 aa		2.55	□□□□□ -2
UBR1-209	ENST00000569243	CPNE1	Q99829	537 aa		2.55	□□□□□ -2
UBR1-209	ENST00000569243	ZNF577	Q9BSK1	485 aa		2.55	□□□□□ -2
UBR1-209	ENST00000569243	MXD3	Q9BW11	206 aa		2.55	□□□□□ -2
UBR1-209	ENST00000569243	PRRG4	Q9BZD6	226 aa		2.55	□□□□□ -2
UBR1-209	ENST00000569243	MAF1	Q9H063	256 aa		2.55	□□□□□ -2
UBR1-209	ENST00000569243	CNOT10	Q9H9A5	744 aa	Known RBP	2.55	□□□□□ -2
UBR1-209	ENST00000569243	ABCB10	Q9NRK6	738 aa		2.55	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms