RNA–Protein interactions for RNA: ENST00000567212.5

UBFD1-207, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBFD1, Length 4,727 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-207ENST00000567212 TNS2Q63HR2 1409 aa12.96□□□□□ -0.33
UBFD1-207ENST00000567212 KNL1Q8NG31 2342 aa12.96□□□□□ -0.33
UBFD1-207ENST00000567212 KMOO15229 486 aa12.96□□□□□ -0.34
UBFD1-207ENST00000567212 SLC25A27O95847 323 aa12.96□□□□□ -0.34
UBFD1-207ENST00000567212 HLA-DPB1P04440 258 aa12.96□□□□□ -0.34
UBFD1-207ENST00000567212 PRPS2P11908 318 aa12.96□□□□□ -0.34
UBFD1-207ENST00000567212 DDCP20711 480 aa12.96□□□□□ -0.34
UBFD1-207ENST00000567212 VAMP1P23763 118 aa12.96□□□□□ -0.34
UBFD1-207ENST00000567212 DCKP27707 260 aa12.96□□□□□ -0.34
UBFD1-207ENST00000567212 RGS8P57771 180 aaPredicted RBP12.96□□□□□ -0.34
UBFD1-207ENST00000567212 BTN3A2P78410 334 aa12.96□□□□□ -0.34
UBFD1-207ENST00000567212 SPHARQ15513 63 aa12.96□□□□□ -0.34
UBFD1-207ENST00000567212 TEAD4Q15561 434 aa12.96□□□□□ -0.34
UBFD1-207ENST00000567212 SLC36A3Q495N2 470 aa12.96□□□□□ -0.34
UBFD1-207ENST00000567212 SCGB2B2Q4G0G5 96 aa12.96□□□□□ -0.34
UBFD1-207ENST00000567212 SLC39A4Q6P5W5 647 aa12.96□□□□□ -0.34
UBFD1-207ENST00000567212 VTCN1Q7Z7D3 282 aa12.96□□□□□ -0.34
UBFD1-207ENST00000567212 KDM1BQ8NB78 822 aa12.96□□□□□ -0.34
UBFD1-207ENST00000567212 CLP1Q92989 425 aaKnown RBP12.96□□□□□ -0.34
UBFD1-207ENST00000567212 NDUFAF4Q9P032 175 aa12.96□□□□□ -0.34
UBFD1-207ENST00000567212 C13orf42A0A1B0GVH6 325 aa12.96□□□□□ -0.34
UBFD1-207ENST00000567212 ARFIP1P53367 373 aa12.96□□□□□ -0.34
UBFD1-207ENST00000567212 MFSD14CQ5VZR4 134 aa12.96□□□□□ -0.34
UBFD1-207ENST00000567212 MAP1SQ66K74 1059 aaPredicted RBP12.96□□□□□ -0.34
UBFD1-207ENST00000567212 CTU1Q7Z7A3 348 aaKnown RBP12.96□□□□□ -0.34
UBFD1-207ENST00000567212 APOBEC3FQ8IUX4 373 aaKnown RBP12.96□□□□□ -0.34
UBFD1-207ENST00000567212 RPLP0P6Q8NHW5 317 aa12.96□□□□□ -0.34
UBFD1-207ENST00000567212 NEIL3Q8TAT5 605 aa12.96□□□□□ -0.34
UBFD1-207ENST00000567212 DNAJA4Q8WW22 397 aaPredicted RBP12.96□□□□□ -0.34
UBFD1-207ENST00000567212 CPNE2Q96FN4 548 aaPredicted RBP12.96□□□□□ -0.34
UBFD1-207ENST00000567212 MED30Q96HR3 178 aa12.96□□□□□ -0.34
UBFD1-207ENST00000567212 SLC30A3Q99726 388 aa12.96□□□□□ -0.34
UBFD1-207ENST00000567212 TMEM185BQ9H7F4 350 aa12.96□□□□□ -0.34
UBFD1-207ENST00000567212 PIGVQ9NUD9 493 aa12.96□□□□□ -0.34
UBFD1-207ENST00000567212 MGAT4CQ9UBM8 478 aa12.96□□□□□ -0.34
UBFD1-207ENST00000567212 SGCEO43556 437 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 NDST3O95803 873 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 C7P10643 843 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 LEPRP48357 1165 aaKnown RBP12.95□□□□□ -0.34
UBFD1-207ENST00000567212 PCBP2Q15366 365 aaKnown RBP eCLIP12.95□□□□□ -0.34
UBFD1-207ENST00000567212 KRTCAP2Q8N6L1 136 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 ANKLE1Q8NAG6 615 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 BEST4Q8NFU0 473 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 CSGALNACT1Q8TDX6 532 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 TFB2MQ9H5Q4 396 aaKnown RBP12.95□□□□□ -0.34
UBFD1-207ENST00000567212 ZDHHC6Q9H6R6 413 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 TRPV4Q9HBA0 871 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 TM9SF3Q9HD45 589 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 OR2S2Q9NQN1 319 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 PLEKHA6Q9Y2H5 1048 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 RIPK3Q9Y572 518 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 TRBC2A0A5B9 178 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 SMLR1H3BR10 107 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 KPNA3O00505 521 aaPredicted RBP12.95□□□□□ -0.34
UBFD1-207ENST00000567212 HCRTO43612 131 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 FARS2O95363 451 aaKnown RBP12.95□□□□□ -0.34
UBFD1-207ENST00000567212 SRPRAP08240 638 aaKnown RBP12.95□□□□□ -0.34
UBFD1-207ENST00000567212 IQCHQ86VS3 1027 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 CLIP3Q96DZ5 547 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 SPATC1LQ9H0A9 340 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 NUDT4Q9NZJ9 180 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 PCDHB5Q9Y5E4 795 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 DNAJC15Q9Y5T4 150 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 PTPRJQ12913 1337 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 ABCC6O95255 1503 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 C17orf102A2RUQ5 167 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 SLC9A3R1O14745 358 aaPredicted RBP12.95□□□□□ -0.34
UBFD1-207ENST00000567212 FFAR2O15552 330 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 TXNL1O43396 289 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 FMO6PO60774 539 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 GBAP04062 536 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 HK1P19367 917 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 IDUAP35475 653 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 PITPNAQ00169 270 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 FAM171A1Q5VUB5 890 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 ABHD15Q6UXT9 468 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 RPTNQ6XPR3 784 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 ADGRG5Q8IZF4 528 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 MINDY1Q8N5J2 469 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 ZSCAN1Q8NBB4 408 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 DNERQ8NFT8 737 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 TMEM80Q96HE8 168 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 RC3H2Q9HBD1 1191 aaKnown RBP12.95□□□□□ -0.34
UBFD1-207ENST00000567212 MIOSQ9NXC5 875 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 PIM2Q9P1W9 311 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 SPACA6W5XKT8 324 aa12.95□□□□□ -0.34
UBFD1-207ENST00000567212 LOC102723532A0A0G2JNH3 316 aa12.94□□□□□ -0.34
UBFD1-207ENST00000567212 CRHBPP24387 322 aa12.94□□□□□ -0.34
UBFD1-207ENST00000567212 SHMT2P34897 504 aa12.94□□□□□ -0.34
UBFD1-207ENST00000567212 SKP1P63208 163 aa12.94□□□□□ -0.34
UBFD1-207ENST00000567212 SLC10A2Q12908 348 aaPredicted RBP12.94□□□□□ -0.34
UBFD1-207ENST00000567212 SCARB2Q14108 478 aa12.94□□□□□ -0.34
UBFD1-207ENST00000567212 MTFR2Q6P444 385 aa12.94□□□□□ -0.34
UBFD1-207ENST00000567212 TAC4Q86UU9 113 aa12.94□□□□□ -0.34
UBFD1-207ENST00000567212 STOML3Q8TAV4 291 aa12.94□□□□□ -0.34
UBFD1-207ENST00000567212 HMCESQ96FZ2 354 aa12.94□□□□□ -0.34
UBFD1-207ENST00000567212 S100A13Q99584 98 aa12.94□□□□□ -0.34
UBFD1-207ENST00000567212 ARMC1Q9NVT9 282 aa12.94□□□□□ -0.34
UBFD1-207ENST00000567212 MON2Q7Z3U7 1717 aa12.94□□□□□ -0.34
UBFD1-207ENST00000567212 G3V2L1 256 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms