RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 ZIC3O60481 467 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 TBX19O60806 448 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 DNAJB6O75190 326 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 CSO75390 466 aaKnown RBP3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 MBD3O95983 291 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 IGHV2-70P01814 119 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 FGF4P08620 206 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 NCF2P19878 526 aaPredicted RBP3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 S1PR1P21453 382 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 PRDX2P32119 198 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 FKBP1BP68106 108 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 MBTD1Q05BQ5 628 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 HNRNPA0Q13151 305 aaKnown RBP3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 LAMB3Q13751 1172 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 NPTX1Q15818 432 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 EPHA10Q5JZY3 1008 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 RABGAP1LQ5R372 815 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 C6orf10Q5SRN2 563 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 FAM69BQ5VUD6 431 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 AGAP6Q5VW22 663 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 FRG2Q64ET8 278 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 PLXDC2Q6UX71 529 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 ZNF704Q6ZNC4 412 aaPredicted RBP3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 Q6ZSN1 163 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 BNIPLQ7Z465 357 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 COMMD2Q86X83 199 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 PNLDC1Q8NA58 520 aaKnown RBP3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 THAP8Q8NA92 274 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 FAM184AQ8NB25 1140 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 MINDY2Q8NBR6 621 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 FAM71CQ8NEG0 241 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 STEAP2Q8NFT2 490 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 OSR1Q8TAX0 266 aaPredicted RBP3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 SLC26A7Q8TE54 656 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 DQX1Q8TE96 717 aaKnown RBP3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 SMPDL3BQ92485 455 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 ULK4Q96C45 1275 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 PHF21BQ96EK2 531 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 P2RY11Q96G91 374 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 C4orf36Q96KX1 117 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 ZNF583Q96ND8 569 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 WWC2-AS2Q96NR7 200 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 RBM14Q96PK6 669 aaKnown RBP3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 GFM1Q96RP9 751 aaKnown RBP3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 PCDHB18PQ96TA0 734 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 MSTO1Q9BUK6 570 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 NTMT1Q9BV86 223 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 FICDQ9BVA6 458 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 POLDIP3Q9BY77 421 aaKnown RBP3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 HPS4Q9NQG7 708 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 GPR173Q9NS66 373 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 GKN1Q9NS71 199 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 ZNHIT6Q9NWK9 470 aaKnown RBP3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 RAB20Q9NX57 234 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 PKD2L2Q9NZM6 624 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 KLHL8Q9P2G9 620 aaPredicted RBP3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 ATXN10Q9UBB4 475 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 NARFQ9UHQ1 456 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 PSME2Q9UL46 239 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 PCDHA7Q9UN72 937 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 WDR83OSQ9Y284 106 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 NSG2Q9Y328 171 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 SLC4A4Q9Y6R1 1079 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 NCAPD2Q15021 1401 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 TSPOAP1O95153 1857 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 SRCAPQ6ZRS2 3230 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 HMGXB3Q12766 1538 aa3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 SYNJ1O43426 1573 aa3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 DIP2BQ9P265 1576 aa3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 SERTM2A0A1B0GWG4 89 aa3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 KRTAP23-1A1A580 65 aa3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 PIPSLA2A3N6 862 aa3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 C2CD4BA6NLJ0 364 aa3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 POC1B-GALNT4F8VUJ3 575 aa3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 H0YIV9 168 aa3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 H7C1Q1 480 aa3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 L7N2F9 121 aa3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 EEF2KO00418 725 aaKnown RBP3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 CHUKO15111 745 aa3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 ZNF208O43345 1280 aa3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 ACSL4O60488 711 aa3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 B4GALT2O60909 372 aa3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 LRP3O75074 770 aa3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 LDB3O75112 727 aa3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 ATP6AP2O75787 350 aa3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 BBOX1O75936 387 aa3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 KDM4BO94953 1096 aa3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 IGHEP01854 428 aa3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 KRT19P08727 400 aa3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 MMP10P09238 476 aa3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 EGR2P11161 476 aaPredicted RBP3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 CETPP11597 493 aa3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 IRF2P14316 349 aa3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 GOT1P17174 413 aa3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 ITGB6P18564 788 aa3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 OR1D2P34982 312 aa3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 ADRA1AP35348 466 aa3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 DEKP35659 375 aaKnown RBP3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 ANP32AP39687 249 aaKnown RBP3.14□□□□□ -1.91
HERPUD1-211ENST00000566550 CCT6AP40227 531 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms