RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 ZNF282Q9UDV7 671 aaPredicted RBP18.93■□□□□ 0.62
CMTM3-207ENST00000564060 MTO1Q9Y2Z2 717 aaKnown RBP18.93■□□□□ 0.62
CMTM3-207ENST00000564060 TLN1Q9Y490 2541 aaKnown RBP18.93■□□□□ 0.62
CMTM3-207ENST00000564060 TNRC6AQ8NDV7 1962 aaKnown RBP18.92■□□□□ 0.62
CMTM3-207ENST00000564060 CDC7O00311 574 aa18.92■□□□□ 0.62
CMTM3-207ENST00000564060 SLC28A2O43868 658 aa18.92■□□□□ 0.62
CMTM3-207ENST00000564060 KLHL41O60662 606 aa18.92■□□□□ 0.62
CMTM3-207ENST00000564060 C1QAP02745 245 aa18.92■□□□□ 0.62
CMTM3-207ENST00000564060 NPPBP16860 134 aa18.92■□□□□ 0.62
CMTM3-207ENST00000564060 FBLP22087 321 aaKnown RBP18.92■□□□□ 0.62
CMTM3-207ENST00000564060 CCR8P51685 355 aa18.92■□□□□ 0.62
CMTM3-207ENST00000564060 RAB10P61026 200 aa18.92■□□□□ 0.62
CMTM3-207ENST00000564060 ATP6V0D1P61421 351 aa18.92■□□□□ 0.62
CMTM3-207ENST00000564060 CSNK1G2P78368 415 aa18.92■□□□□ 0.62
CMTM3-207ENST00000564060 ATP1A4Q13733 1029 aa18.92■□□□□ 0.62
CMTM3-207ENST00000564060 FAM53BQ14153 422 aa18.92■□□□□ 0.62
CMTM3-207ENST00000564060 HKDC1Q2TB90 917 aa18.92■□□□□ 0.62
CMTM3-207ENST00000564060 CPZQ66K79 652 aa18.92■□□□□ 0.62
CMTM3-207ENST00000564060 COX15Q7KZN9 410 aa18.92■□□□□ 0.62
CMTM3-207ENST00000564060 CAMKVQ8NCB2 501 aa18.92■□□□□ 0.62
CMTM3-207ENST00000564060 PYCR2Q96C36 320 aa18.92■□□□□ 0.62
CMTM3-207ENST00000564060 SPSB2Q99619 263 aa18.92■□□□□ 0.62
CMTM3-207ENST00000564060 SLC25A23Q9BV35 468 aa18.92■□□□□ 0.62
CMTM3-207ENST00000564060 TRIM55Q9BYV6 548 aa18.92■□□□□ 0.62
CMTM3-207ENST00000564060 ZNF71Q9NQZ8 489 aaPredicted RBP18.92■□□□□ 0.62
CMTM3-207ENST00000564060 ANAPC2Q9UJX6 822 aa18.92■□□□□ 0.62
CMTM3-207ENST00000564060 TP53TG5Q9Y2B4 290 aa18.92■□□□□ 0.62
CMTM3-207ENST00000564060 DYRK1BQ9Y463 629 aa18.92■□□□□ 0.62
CMTM3-207ENST00000564060 PCDHGB7Q9Y5F8 929 aa18.92■□□□□ 0.62
CMTM3-207ENST00000564060 MAU2Q9Y6X3 613 aa18.92■□□□□ 0.62
CMTM3-207ENST00000564060 SPTA1P02549 2419 aa18.92■□□□□ 0.62
CMTM3-207ENST00000564060 CNOT3O75175 753 aaKnown RBP18.91■□□□□ 0.62
CMTM3-207ENST00000564060 DNAJB5O75953 348 aa18.91■□□□□ 0.62
CMTM3-207ENST00000564060 SLC35G6P0C7Q6 338 aa18.91■□□□□ 0.62
CMTM3-207ENST00000564060 CDH1P12830 882 aa18.91■□□□□ 0.62
CMTM3-207ENST00000564060 PLA2G2AP14555 144 aa18.91■□□□□ 0.62
CMTM3-207ENST00000564060 MMP11P24347 488 aa18.91■□□□□ 0.62
CMTM3-207ENST00000564060 CCL11P51671 97 aa18.91■□□□□ 0.62
CMTM3-207ENST00000564060 DSG2Q14126 1118 aa18.91■□□□□ 0.62
CMTM3-207ENST00000564060 TSNQ15631 228 aaKnown RBP18.91■□□□□ 0.62
CMTM3-207ENST00000564060 ZKSCAN8Q15776 578 aaPredicted RBP18.91■□□□□ 0.62
CMTM3-207ENST00000564060 ATG14Q6ZNE5 492 aa18.91■□□□□ 0.62
CMTM3-207ENST00000564060 RELL1Q8IUW5 271 aa18.91■□□□□ 0.62
CMTM3-207ENST00000564060 PLD3Q8IV08 490 aa18.91■□□□□ 0.62
CMTM3-207ENST00000564060 TCAIMQ8N3R3 496 aa18.91■□□□□ 0.62
CMTM3-207ENST00000564060 CLEC1AQ8NC01 280 aa18.91■□□□□ 0.62
CMTM3-207ENST00000564060 ABHD11Q8NFV4 315 aa18.91■□□□□ 0.62
CMTM3-207ENST00000564060 ANKRD49Q8WVL7 239 aa18.91■□□□□ 0.62
CMTM3-207ENST00000564060 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.91■□□□□ 0.62
CMTM3-207ENST00000564060 CAB39LQ9H9S4 337 aa18.91■□□□□ 0.62
CMTM3-207ENST00000564060 SEMA3GQ9NS98 782 aa18.91■□□□□ 0.62
CMTM3-207ENST00000564060 VSTM2BA6NLU5 285 aa18.9■□□□□ 0.62
CMTM3-207ENST00000564060 PHGDHO43175 533 aaKnown RBP18.9■□□□□ 0.62
CMTM3-207ENST00000564060 SUV39H1O43463 412 aa18.9■□□□□ 0.62
CMTM3-207ENST00000564060 WISP3O95389 354 aaPredicted RBP18.9■□□□□ 0.62
CMTM3-207ENST00000564060 UMODP07911 640 aa18.9■□□□□ 0.62
CMTM3-207ENST00000564060 CCDC166P0CW27 439 aa18.9■□□□□ 0.62
CMTM3-207ENST00000564060 AVPR1BP47901 424 aa18.9■□□□□ 0.62
CMTM3-207ENST00000564060 PGDP52209 483 aa18.9■□□□□ 0.62
CMTM3-207ENST00000564060 CHAF1BQ13112 559 aa18.9■□□□□ 0.62
CMTM3-207ENST00000564060 CSHL1Q14406 222 aa18.9■□□□□ 0.62
CMTM3-207ENST00000564060 SLMAPQ14BN4 828 aa18.9■□□□□ 0.62
CMTM3-207ENST00000564060 ASB18Q6ZVZ8 466 aa18.9■□□□□ 0.62
CMTM3-207ENST00000564060 CCDC91Q7Z6B0 441 aa18.9■□□□□ 0.62
CMTM3-207ENST00000564060 ASPGQ86U10 573 aa18.9■□□□□ 0.62
CMTM3-207ENST00000564060 HPS6Q86YV9 775 aa18.9■□□□□ 0.62
CMTM3-207ENST00000564060 NOA1Q8NC60 698 aaKnown RBP18.9■□□□□ 0.62
CMTM3-207ENST00000564060 SLC5A11Q8WWX8 675 aa18.9■□□□□ 0.62
CMTM3-207ENST00000564060 MIEF2Q96C03 454 aa18.9■□□□□ 0.62
CMTM3-207ENST00000564060 MMABQ96EY8 250 aaPredicted RBP18.9■□□□□ 0.62
CMTM3-207ENST00000564060 FMO2Q99518 471 aa18.9■□□□□ 0.62
CMTM3-207ENST00000564060 SARGQ9BW04 601 aa18.9■□□□□ 0.62
CMTM3-207ENST00000564060 C14orf105Q9NVL8 296 aa18.9■□□□□ 0.62
CMTM3-207ENST00000564060 P4HTMQ9NXG6 502 aa18.9■□□□□ 0.62
CMTM3-207ENST00000564060 CTSFQ9UBX1 484 aa18.9■□□□□ 0.62
CMTM3-207ENST00000564060 DMGDHQ9UI17 866 aaKnown RBP18.9■□□□□ 0.62
CMTM3-207ENST00000564060 IKZF3Q9UKT9 509 aa18.9■□□□□ 0.62
CMTM3-207ENST00000564060 SH2B3Q9UQQ2 575 aa18.9■□□□□ 0.62
CMTM3-207ENST00000564060 KCNE2Q9Y6J6 123 aa18.9■□□□□ 0.62
CMTM3-207ENST00000564060 BOD1L1Q8NFC6 3051 aa18.9■□□□□ 0.62
CMTM3-207ENST00000564060 IGLV3-12A0A075B6K2 115 aa18.89■□□□□ 0.61
CMTM3-207ENST00000564060 AGPSO00116 658 aa18.89■□□□□ 0.61
CMTM3-207ENST00000564060 P2RX6O15547 441 aa18.89■□□□□ 0.61
CMTM3-207ENST00000564060 CEACAM4O75871 244 aa18.89■□□□□ 0.61
CMTM3-207ENST00000564060 MED26O95402 600 aa18.89■□□□□ 0.61
CMTM3-207ENST00000564060 KLRB1Q12918 225 aa18.89■□□□□ 0.61
CMTM3-207ENST00000564060 TGFBIQ15582 683 aa18.89■□□□□ 0.61
CMTM3-207ENST00000564060 CDKL4Q5MAI5 379 aa18.89■□□□□ 0.61
CMTM3-207ENST00000564060 RAPH1Q70E73 1250 aa18.89■□□□□ 0.61
CMTM3-207ENST00000564060 VN1R4Q7Z5H5 301 aa18.89■□□□□ 0.61
CMTM3-207ENST00000564060 PPP1R32Q7Z5V6 425 aa18.89■□□□□ 0.61
CMTM3-207ENST00000564060 THOC6Q86W42 341 aaKnown RBP18.89■□□□□ 0.61
CMTM3-207ENST00000564060 PTRH1Q86Y79 214 aaKnown RBP18.89■□□□□ 0.61
CMTM3-207ENST00000564060 MFSD9Q8NBP5 474 aa18.89■□□□□ 0.61
CMTM3-207ENST00000564060 OR4K1Q8NGD4 311 aa18.89■□□□□ 0.61
CMTM3-207ENST00000564060 STT3BQ8TCJ2 826 aa18.89■□□□□ 0.61
CMTM3-207ENST00000564060 OR4K3Q96R72 315 aa18.89■□□□□ 0.61
CMTM3-207ENST00000564060 CYTH2Q99418 400 aa18.89■□□□□ 0.61
CMTM3-207ENST00000564060 CRB3Q9BUF7 120 aa18.89■□□□□ 0.61
CMTM3-207ENST00000564060 SOX17Q9H6I2 414 aaPredicted RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms