RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 TRIB1Q96RU8 372 aa9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 TUBGCP2Q9BSJ2 902 aa9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 RAB6CQ9H0N0 254 aa9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 METTL17Q9H7H0 456 aaPredicted RBP9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 MKKSQ9NPJ1 570 aaPredicted RBP9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 NFKBIL1Q9UBC1 381 aaPredicted RBP9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 C19orf25Q9UFG5 118 aaPredicted RBP9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 PCDHA3Q9Y5H8 950 aa9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 TRGV5A0A0B4J1U4 118 aa9.8□□□□□ -0.84
HDGFL3-204ENST00000563790 LRRC14BA6NHZ5 514 aa9.8□□□□□ -0.84
HDGFL3-204ENST00000563790 A8MXE2 369 aa9.8□□□□□ -0.84
HDGFL3-204ENST00000563790 H3BRJ5 948 aa9.8□□□□□ -0.84
HDGFL3-204ENST00000563790 EPB41P11171 864 aaKnown RBP9.8□□□□□ -0.84
HDGFL3-204ENST00000563790 SYKP43405 635 aa9.8□□□□□ -0.84
HDGFL3-204ENST00000563790 FMO5P49326 533 aa9.8□□□□□ -0.84
HDGFL3-204ENST00000563790 PCDH1Q08174 1060 aa9.8□□□□□ -0.84
HDGFL3-204ENST00000563790 IL10RBQ08334 325 aa9.8□□□□□ -0.84
HDGFL3-204ENST00000563790 SCGB2A2Q13296 93 aa9.8□□□□□ -0.84
HDGFL3-204ENST00000563790 PTPN20Q4JDL3 420 aa9.8□□□□□ -0.84
HDGFL3-204ENST00000563790 DCAF17Q5H9S7 520 aaPredicted RBP9.8□□□□□ -0.84
HDGFL3-204ENST00000563790 PPM1KQ8N3J5 372 aa9.8□□□□□ -0.84
HDGFL3-204ENST00000563790 PGBD5Q8N414 524 aa9.8□□□□□ -0.84
HDGFL3-204ENST00000563790 AKAP1Q92667 903 aaKnown RBP eCLIP9.8□□□□□ -0.84
HDGFL3-204ENST00000563790 NTAN1Q96AB6 310 aa9.8□□□□□ -0.84
HDGFL3-204ENST00000563790 CYTH2Q99418 400 aa9.8□□□□□ -0.84
HDGFL3-204ENST00000563790 MGME1Q9BQP7 344 aa9.8□□□□□ -0.84
HDGFL3-204ENST00000563790 PRR14Q9BWN1 585 aa9.8□□□□□ -0.84
HDGFL3-204ENST00000563790 SLC39A8Q9C0K1 460 aa9.8□□□□□ -0.84
HDGFL3-204ENST00000563790 XKR8Q9H6D3 395 aa9.8□□□□□ -0.84
HDGFL3-204ENST00000563790 SPHK1Q9NYA1 384 aa9.8□□□□□ -0.84
HDGFL3-204ENST00000563790 HCN3Q9P1Z3 774 aa9.8□□□□□ -0.84
HDGFL3-204ENST00000563790 CFAP45Q9UL16 551 aa9.8□□□□□ -0.84
HDGFL3-204ENST00000563790 TMPRSS11EQ9UL52 423 aa9.8□□□□□ -0.84
HDGFL3-204ENST00000563790 DRG1Q9Y295 367 aaKnown RBP9.8□□□□□ -0.84
HDGFL3-204ENST00000563790 PCDHA13Q9Y5I0 950 aa9.8□□□□□ -0.84
HDGFL3-204ENST00000563790 LCE6AA0A183 80 aa9.79□□□□□ -0.84
HDGFL3-204ENST00000563790 CETN3O15182 167 aa9.79□□□□□ -0.84
HDGFL3-204ENST00000563790 KLF4O43474 513 aa9.79□□□□□ -0.84
HDGFL3-204ENST00000563790 GCNT1Q02742 428 aa9.79□□□□□ -0.84
HDGFL3-204ENST00000563790 FAM27E3Q08E93 113 aa9.79□□□□□ -0.84
HDGFL3-204ENST00000563790 SLC10A1Q14973 349 aa9.79□□□□□ -0.84
HDGFL3-204ENST00000563790 ANKRD20A8PQ5CZ79 823 aa9.79□□□□□ -0.84
HDGFL3-204ENST00000563790 TCERG1LQ5VWI1 586 aa9.79□□□□□ -0.84
HDGFL3-204ENST00000563790 ALS2CLQ60I27 953 aa9.79□□□□□ -0.84
HDGFL3-204ENST00000563790 RUSC1-AS1Q66K80 236 aa9.79□□□□□ -0.84
HDGFL3-204ENST00000563790 ADAM5Q6NVV9 412 aa9.79□□□□□ -0.84
HDGFL3-204ENST00000563790 ZC3H7AQ8IWR0 971 aaKnown RBP9.79□□□□□ -0.84
HDGFL3-204ENST00000563790 ARMC10Q8N2F6 343 aa9.79□□□□□ -0.84
HDGFL3-204ENST00000563790 GPR26Q8NDV2 337 aa9.79□□□□□ -0.84
HDGFL3-204ENST00000563790 CCHCR1Q8TD31 782 aa9.79□□□□□ -0.84
HDGFL3-204ENST00000563790 ELP5Q8TE02 316 aa9.79□□□□□ -0.84
HDGFL3-204ENST00000563790 VPS35Q96QK1 796 aa9.79□□□□□ -0.84
HDGFL3-204ENST00000563790 C11orf70Q9BRQ4 267 aa9.79□□□□□ -0.84
HDGFL3-204ENST00000563790 SFXN3Q9BWM7 321 aa9.79□□□□□ -0.84
HDGFL3-204ENST00000563790 YIPF2Q9BWQ6 316 aa9.79□□□□□ -0.84
HDGFL3-204ENST00000563790 EXO5Q9H790 373 aa9.79□□□□□ -0.84
HDGFL3-204ENST00000563790 SYNCQ9H7C4 482 aa9.79□□□□□ -0.84
HDGFL3-204ENST00000563790 ACP6Q9NPH0 428 aa9.79□□□□□ -0.84
HDGFL3-204ENST00000563790 TIMMDC1Q9NPL8 285 aa9.79□□□□□ -0.84
HDGFL3-204ENST00000563790 DMGDHQ9UI17 866 aaKnown RBP9.79□□□□□ -0.84
HDGFL3-204ENST00000563790 KIAA1109Q2LD37 5005 aa9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 SLC5A10A0PJK1 596 aa9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 CD8B2A6NJW9 211 aa9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 ARHGEF33A8MVX0 844 aa9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 FCHO1O14526 889 aa9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 PPP1R12AO14974 1030 aaPredicted RBP9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 PRPF4O43172 522 aaKnown RBP eCLIP9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 MAGP20916 626 aa9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 CCKARP32238 428 aa9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 CPOXP36551 454 aa9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 SLC26A3P40879 764 aa9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 FKBP3Q00688 224 aaKnown RBP9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 CA9Q16790 459 aa9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 MUM1Q2TAK8 710 aa9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 P3H1Q32P28 736 aa9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 PLXDC2Q6UX71 529 aa9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 ARHGAP36Q6ZRI8 547 aa9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 RRAGAQ7L523 313 aa9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 PYROXD2Q8N2H3 581 aa9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 CCDC185Q8N715 623 aa9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 PSD4Q8NDX1 1056 aa9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 BRSK1Q8TDC3 778 aa9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 C10orf105Q8TEF2 133 aa9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 FAM168AQ92567 244 aa9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 ZC3HAV1LQ96H79 300 aaKnown RBP9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 RBM41Q96IZ5 413 aaKnown RBP9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 TTC25Q96NG3 672 aa9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 ZNF599Q96NL3 588 aa9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 FERD3LQ96RJ6 166 aa9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 SELENOSQ9BQE4 189 aa9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 VN1R1Q9GZP7 353 aa9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 PDP1Q9P0J1 537 aaPredicted RBP9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 ARMCX3Q9UH62 379 aaPredicted RBP9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 CDC14AQ9UNH5 594 aa9.78□□□□□ -0.84
HDGFL3-204ENST00000563790 A0A0G2JMM0 328 aa9.77□□□□□ -0.85
HDGFL3-204ENST00000563790 ATP6AP2A0A1C7CYW4 349 aa9.77□□□□□ -0.85
HDGFL3-204ENST00000563790 A0A1W2PPB8 328 aa9.77□□□□□ -0.85
HDGFL3-204ENST00000563790 A0A1W2PRS3 328 aa9.77□□□□□ -0.85
HDGFL3-204ENST00000563790 MGAT4DA6NG13 374 aa9.77□□□□□ -0.85
HDGFL3-204ENST00000563790 BECN2A8MW95 431 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms