RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 MAPRE2Q15555 327 aa21.09■□□□□ 0.97
LINC01960-201ENST00000563759 CACHD1Q5VU97 1274 aa21.09■□□□□ 0.97
LINC01960-201ENST00000563759 GK5Q6ZS86 529 aa21.09■□□□□ 0.97
LINC01960-201ENST00000563759 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.09■□□□□ 0.97
LINC01960-201ENST00000563759 OR4K1Q8NGD4 311 aa21.09■□□□□ 0.97
LINC01960-201ENST00000563759 RP9Q8TA86 221 aaKnown RBP21.09■□□□□ 0.97
LINC01960-201ENST00000563759 ACTR10Q9NZ32 417 aa21.09■□□□□ 0.97
LINC01960-201ENST00000563759 ARID1BQ8NFD5 2236 aaPredicted RBP21.08■□□□□ 0.97
LINC01960-201ENST00000563759 FOXE1O00358 373 aaPredicted RBP21.08■□□□□ 0.97
LINC01960-201ENST00000563759 SH3BGRLO75368 114 aa21.08■□□□□ 0.97
LINC01960-201ENST00000563759 GPX3P22352 226 aa21.08■□□□□ 0.97
LINC01960-201ENST00000563759 HOXD12P35452 270 aa21.08■□□□□ 0.97
LINC01960-201ENST00000563759 PIK3CBP42338 1070 aa21.08■□□□□ 0.97
LINC01960-201ENST00000563759 HERC3Q15034 1050 aa21.08■□□□□ 0.97
LINC01960-201ENST00000563759 PEAR1Q5VY43 1037 aaPredicted RBP21.08■□□□□ 0.97
LINC01960-201ENST00000563759 KIAA1614Q5VZ46 1190 aa21.08■□□□□ 0.97
LINC01960-201ENST00000563759 OOSP2Q86WS3 158 aa21.08■□□□□ 0.97
LINC01960-201ENST00000563759 ZBTB44Q8NCP5 570 aa21.08■□□□□ 0.97
LINC01960-201ENST00000563759 TBC1D10AQ9BXI6 508 aa21.08■□□□□ 0.97
LINC01960-201ENST00000563759 TMEM184CQ9NVA4 438 aa21.08■□□□□ 0.97
LINC01960-201ENST00000563759 TMED5Q9Y3A6 229 aa21.08■□□□□ 0.97
LINC01960-201ENST00000563759 TSC22D4Q9Y3Q8 395 aa21.08■□□□□ 0.97
LINC01960-201ENST00000563759 ANKDD1BA6NHY2 528 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 C2orf74A8MZ97 194 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 NPIPB8E9PQR5 432 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 G6PDP11413 515 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 UGT2B7P16662 529 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 HRH2P25021 359 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 ACADVLP49748 655 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 CYP4F2P78329 520 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 BNIP3Q12983 259 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 ZNF423Q2M1K9 1284 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 PDCD4Q53EL6 469 aaKnown RBP21.07■□□□□ 0.96
LINC01960-201ENST00000563759 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.07■□□□□ 0.96
LINC01960-201ENST00000563759 CYP20A1Q6UW02 462 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 RABEPKQ7Z6M1 372 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 SLC7A6OSQ96CW6 309 aaPredicted RBP21.07■□□□□ 0.96
LINC01960-201ENST00000563759 APIPQ96GX9 242 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 NMRK1Q9NWW6 199 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 HRASLS2Q9NWW9 162 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 PCDHGA2Q9Y5H1 932 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 ENTPD2Q9Y5L3 495 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 CSNK1G3Q9Y6M4 447 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 OR1F1O43749 312 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 ETHE1O95571 254 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 CD1EP15812 388 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 MAPK1P28482 360 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 SERPINB1P30740 379 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 DPP6P42658 865 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 RXRGP48443 463 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 ACSM2AQ08AH3 577 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 GRIK2Q13002 908 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 DUOXA1Q1HG43 343 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 C14orf28Q4W4Y0 310 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 ACSM2BQ68CK6 577 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 PLD3Q8IV08 490 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 LIX1Q8N485 282 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 TBC1D19Q8N5T2 526 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 APOLD1Q96LR9 279 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 OR2A14Q96R47 310 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.07■□□□□ 0.96
LINC01960-201ENST00000563759 LRMDAQ9H2I8 198 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 NT5DC2Q9H857 520 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 ASIC5Q9NY37 505 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 ADGRE2Q9UHX3 823 aa21.07■□□□□ 0.96
LINC01960-201ENST00000563759 B2RBV5 119 aa21.06■□□□□ 0.96
LINC01960-201ENST00000563759 PPM1DO15297 605 aa21.06■□□□□ 0.96
LINC01960-201ENST00000563759 TYRP1P17643 537 aa21.06■□□□□ 0.96
LINC01960-201ENST00000563759 AMD1P17707 334 aa21.06■□□□□ 0.96
LINC01960-201ENST00000563759 PTPN4P29074 926 aa21.06■□□□□ 0.96
LINC01960-201ENST00000563759 MRPL19P49406 292 aaKnown RBP21.06■□□□□ 0.96
LINC01960-201ENST00000563759 CUL3Q13618 768 aa21.06■□□□□ 0.96
LINC01960-201ENST00000563759 KIAA0040Q15053 153 aa21.06■□□□□ 0.96
LINC01960-201ENST00000563759 C6orf132Q5T0Z8 1188 aa21.06■□□□□ 0.96
LINC01960-201ENST00000563759 ARMC6Q6NXE6 501 aa21.06■□□□□ 0.96
LINC01960-201ENST00000563759 TRIM73Q86UV7 250 aa21.06■□□□□ 0.96
LINC01960-201ENST00000563759 PARP9Q8IXQ6 854 aa21.06■□□□□ 0.96
LINC01960-201ENST00000563759 KIF2BQ8N4N8 673 aa21.06■□□□□ 0.96
LINC01960-201ENST00000563759 ANKRD53Q8N9V6 530 aa21.06■□□□□ 0.96
LINC01960-201ENST00000563759 KYQ8NBH2 561 aa21.06■□□□□ 0.96
LINC01960-201ENST00000563759 SLC38A3Q99624 504 aa21.06■□□□□ 0.96
LINC01960-201ENST00000563759 MRPL1Q9BYD6 325 aaKnown RBP21.06■□□□□ 0.96
LINC01960-201ENST00000563759 RHBGQ9H310 441 aa21.06■□□□□ 0.96
LINC01960-201ENST00000563759 FSCN3Q9NQT6 498 aa21.06■□□□□ 0.96
LINC01960-201ENST00000563759 SNX7Q9UNH6 387 aa21.06■□□□□ 0.96
LINC01960-201ENST00000563759 KLHL20Q9Y2M5 609 aa21.06■□□□□ 0.96
LINC01960-201ENST00000563759 TRBC2A0A5B9 178 aa21.05■□□□□ 0.96
LINC01960-201ENST00000563759 FAM86C2PA6NEL3 165 aa21.05■□□□□ 0.96
LINC01960-201ENST00000563759 NR5A2O00482 541 aa21.05■□□□□ 0.96
LINC01960-201ENST00000563759 HAT1O14929 419 aa21.05■□□□□ 0.96
LINC01960-201ENST00000563759 NRP2O60462 931 aa21.05■□□□□ 0.96
LINC01960-201ENST00000563759 SLC22A3O75751 556 aa21.05■□□□□ 0.96
LINC01960-201ENST00000563759 TGFB1P01137 390 aa21.05■□□□□ 0.96
LINC01960-201ENST00000563759 ACTN3Q08043 901 aaPredicted RBP21.05■□□□□ 0.96
LINC01960-201ENST00000563759 PTGR1Q14914 329 aa21.05■□□□□ 0.96
LINC01960-201ENST00000563759 LPAL2Q16609 132 aa21.05■□□□□ 0.96
LINC01960-201ENST00000563759 SPIN4Q56A73 249 aa21.05■□□□□ 0.96
LINC01960-201ENST00000563759 SPESP1Q6UW49 350 aa21.05■□□□□ 0.96
LINC01960-201ENST00000563759 SLC25A45Q8N413 288 aa21.05■□□□□ 0.96
LINC01960-201ENST00000563759 GPR156Q8NFN8 814 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms