RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 TSPAN14Q8NG11 270 aa2.55□□□□□ -2
HMGB1P33-201ENST00000563485 OR10G7Q8NGN6 311 aa2.55□□□□□ -2
HMGB1P33-201ENST00000563485 TEKT4Q8WW24 435 aa2.55□□□□□ -2
HMGB1P33-201ENST00000563485 METTL21AQ8WXB1 218 aa2.55□□□□□ -2
HMGB1P33-201ENST00000563485 NAP1L4Q99733 375 aaKnown RBP2.55□□□□□ -2
HMGB1P33-201ENST00000563485 ATF6BQ99941 703 aa2.55□□□□□ -2
HMGB1P33-201ENST00000563485 EGLN3Q9H6Z9 239 aa2.55□□□□□ -2
HMGB1P33-201ENST00000563485 NOL11Q9H8H0 719 aaKnown RBP2.55□□□□□ -2
HMGB1P33-201ENST00000563485 CDH20Q9HBT6 801 aa2.55□□□□□ -2
HMGB1P33-201ENST00000563485 ABCB10Q9NRK6 738 aa2.55□□□□□ -2
HMGB1P33-201ENST00000563485 DDX25Q9UHL0 483 aaKnown RBP2.55□□□□□ -2
HMGB1P33-201ENST00000563485 ELF5Q9UKW6 265 aaPredicted RBP2.55□□□□□ -2
HMGB1P33-201ENST00000563485 PPIEQ9UNP9 301 aaKnown RBP2.55□□□□□ -2
HMGB1P33-201ENST00000563485 IGHV3-38A0A0C4DH36 116 aa2.54□□□□□ -2
HMGB1P33-201ENST00000563485 GLTPD2A6NH11 291 aa2.54□□□□□ -2
HMGB1P33-201ENST00000563485 ECE2O60344 883 aa2.54□□□□□ -2
HMGB1P33-201ENST00000563485 PRG2P13727 222 aa2.54□□□□□ -2
HMGB1P33-201ENST00000563485 MYOGP15173 224 aa2.54□□□□□ -2
HMGB1P33-201ENST00000563485 CYP11B2P19099 503 aa2.54□□□□□ -2
HMGB1P33-201ENST00000563485 POLR2LP62875 67 aaKnown RBP2.54□□□□□ -2
HMGB1P33-201ENST00000563485 RASGEF1BQ0VAM2 473 aa2.54□□□□□ -2
HMGB1P33-201ENST00000563485 PRKG2Q13237 762 aa2.54□□□□□ -2
HMGB1P33-201ENST00000563485 OPCMLQ14982 345 aa2.54□□□□□ -2
HMGB1P33-201ENST00000563485 ZNF146Q15072 292 aa2.54□□□□□ -2
HMGB1P33-201ENST00000563485 NPTX1Q15818 432 aa2.54□□□□□ -2
HMGB1P33-201ENST00000563485 VWC2Q2TAL6 325 aa2.54□□□□□ -2
HMGB1P33-201ENST00000563485 OR4C11Q6IEV9 310 aa2.54□□□□□ -2
HMGB1P33-201ENST00000563485 CAMKMTQ7Z624 323 aa2.54□□□□□ -2
HMGB1P33-201ENST00000563485 LRTM2Q8N967 370 aa2.54□□□□□ -2
HMGB1P33-201ENST00000563485 RASGEF1AQ8N9B8 481 aa2.54□□□□□ -2
HMGB1P33-201ENST00000563485 DGAT2Q96PD7 388 aa2.54□□□□□ -2
HMGB1P33-201ENST00000563485 KLHL5Q96PQ7 755 aa2.54□□□□□ -2
HMGB1P33-201ENST00000563485 GCNAQ96QF7 691 aa2.54□□□□□ -2
HMGB1P33-201ENST00000563485 CPNE1Q99829 537 aa2.54□□□□□ -2
HMGB1P33-201ENST00000563485 PI4K2AQ9BTU6 479 aa2.54□□□□□ -2
HMGB1P33-201ENST00000563485 MXD3Q9BW11 206 aa2.54□□□□□ -2
HMGB1P33-201ENST00000563485 CCDC106Q9BWC9 280 aa2.54□□□□□ -2
HMGB1P33-201ENST00000563485 DNAI2Q9GZS0 605 aa2.54□□□□□ -2
HMGB1P33-201ENST00000563485 CNOT10Q9H9A5 744 aaKnown RBP2.54□□□□□ -2
HMGB1P33-201ENST00000563485 TBC1D22BQ9NU19 505 aa2.54□□□□□ -2
HMGB1P33-201ENST00000563485 NLGN3Q9NZ94 848 aa2.54□□□□□ -2
HMGB1P33-201ENST00000563485 CPSF2Q9P2I0 782 aaKnown RBP2.54□□□□□ -2
HMGB1P33-201ENST00000563485 GPR34Q9UPC5 381 aa2.54□□□□□ -2
HMGB1P33-201ENST00000563485 TMEM5Q9Y2B1 443 aa2.54□□□□□ -2
HMGB1P33-201ENST00000563485 NOTCH2Q04721 2471 aa2.54□□□□□ -2
HMGB1P33-201ENST00000563485 IGHV3-20A0A0C4DH32 117 aa2.53□□□□□ -2
HMGB1P33-201ENST00000563485 MTMR11A4FU01 709 aa2.53□□□□□ -2
HMGB1P33-201ENST00000563485 ZNF840PA6NDX5 716 aa2.53□□□□□ -2
HMGB1P33-201ENST00000563485 SLC1A7O00341 560 aa2.53□□□□□ -2
HMGB1P33-201ENST00000563485 SNX3O60493 162 aa2.53□□□□□ -2
HMGB1P33-201ENST00000563485 ATP6AP2O75787 350 aa2.53□□□□□ -2
HMGB1P33-201ENST00000563485 BEST1O76090 585 aa2.53□□□□□ -2
HMGB1P33-201ENST00000563485 PGM3O95394 542 aa2.53□□□□□ -2
HMGB1P33-201ENST00000563485 CSN3P07498 182 aa2.53□□□□□ -2
HMGB1P33-201ENST00000563485 SAGP10523 405 aaPredicted RBP2.53□□□□□ -2
HMGB1P33-201ENST00000563485 EPCAMP16422 314 aa2.53□□□□□ -2
HMGB1P33-201ENST00000563485 AADACP22760 399 aa2.53□□□□□ -2
HMGB1P33-201ENST00000563485 LMAN1P49257 510 aa2.53□□□□□ -2
HMGB1P33-201ENST00000563485 LIG4P49917 911 aa2.53□□□□□ -2
HMGB1P33-201ENST00000563485 ATP4BP51164 291 aa2.53□□□□□ -2
HMGB1P33-201ENST00000563485 CLDN15P56746 228 aa2.53□□□□□ -2
HMGB1P33-201ENST00000563485 FKBP3Q00688 224 aaKnown RBP2.53□□□□□ -2
HMGB1P33-201ENST00000563485 NONOQ15233 471 aaKnown RBP eCLIP2.53□□□□□ -2
HMGB1P33-201ENST00000563485 ALDH1L2Q3SY69 923 aa2.53□□□□□ -2
HMGB1P33-201ENST00000563485 CTR9Q6PD62 1173 aa2.53□□□□□ -2
HMGB1P33-201ENST00000563485 VITQ6UXI7 678 aa2.53□□□□□ -2
HMGB1P33-201ENST00000563485 RNF130Q86XS8 419 aa2.53□□□□□ -2
HMGB1P33-201ENST00000563485 KRTAP11-1Q8IUC1 163 aa2.53□□□□□ -2
HMGB1P33-201ENST00000563485 GPC2Q8N158 579 aa2.53□□□□□ -2
HMGB1P33-201ENST00000563485 GPD1LQ8N335 351 aa2.53□□□□□ -2
HMGB1P33-201ENST00000563485 SYT2Q8N9I0 419 aaPredicted RBP2.53□□□□□ -2
HMGB1P33-201ENST00000563485 OR52B6Q8NGF0 335 aa2.53□□□□□ -2
HMGB1P33-201ENST00000563485 OR4D10Q8NGI6 311 aa2.53□□□□□ -2
HMGB1P33-201ENST00000563485 KCNE4Q8WWG9 221 aa2.53□□□□□ -2
HMGB1P33-201ENST00000563485 PSMB7Q99436 277 aa2.53□□□□□ -2
HMGB1P33-201ENST00000563485 CDCA3Q99618 268 aaPredicted RBP2.53□□□□□ -2
HMGB1P33-201ENST00000563485 KLHL4Q9C0H6 718 aa2.53□□□□□ -2
HMGB1P33-201ENST00000563485 GPR88Q9GZN0 384 aa2.53□□□□□ -2
HMGB1P33-201ENST00000563485 HACD3Q9P035 362 aa2.53□□□□□ -2
HMGB1P33-201ENST00000563485 IL17BQ9UHF5 180 aa2.53□□□□□ -2
HMGB1P33-201ENST00000563485 CELA1Q9UNI1 258 aa2.53□□□□□ -2
HMGB1P33-201ENST00000563485 A0A087WWV3 80 aa2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 ANKRD18BA2A2Z9 1011 aa2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 ADAM20O43506 726 aa2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 ZNF354AO60765 605 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 GSRP00390 522 aa2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 ATP5BP06576 529 aaKnown RBP2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 ABCB1P08183 1280 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 PCP11498 1178 aaKnown RBP2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 AZGP1P25311 298 aaKnown RBP2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 ACTN2P35609 894 aa2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 KHKP50053 298 aa2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 ASCL1P50553 236 aa2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 CLNS1AP54105 237 aaKnown RBP2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 OR1D5P58170 312 aa2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 FAM182AQ5T1J6 154 aa2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 ZBTB49Q6ZSB9 765 aa2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 RCOR2Q8IZ40 523 aa2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 SLC34A3Q8N130 599 aa2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 TCEANCQ8N8B7 351 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms