RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 SH2B3Q9UQQ2 575 aa9.91□□□□□ -0.82
USP3-219ENST00000561326 CCL27Q9Y4X3 112 aa9.91□□□□□ -0.82
USP3-219ENST00000561326 COPG1Q9Y678 874 aaKnown RBP9.91□□□□□ -0.82
USP3-219ENST00000561326 A0A0C4DFX4 3053 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 RP1P56715 2156 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 A0A1B0GTQ1 180 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 LILRA5A6NI73 299 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 MAGEB17A8MXT2 336 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 BTN3A3O00478 584 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 TNFSF14O43557 240 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 OR1F1O43749 312 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 SDC3O75056 442 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 SLC22A3O75751 556 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 UNC5CO95185 931 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 CER1O95813 267 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 SNRPB2P08579 225 aaKnown RBP9.9□□□□□ -0.82
USP3-219ENST00000561326 PRPS2P11908 318 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 COX4I1P13073 169 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 ACPPP15309 386 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 POLR2CP19387 275 aaPredicted RBP9.9□□□□□ -0.82
USP3-219ENST00000561326 PIK3R1P27986 724 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 AHRP35869 848 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 MRPL19P49406 292 aaKnown RBP9.9□□□□□ -0.82
USP3-219ENST00000561326 PPM1FP49593 454 aaPredicted RBP9.9□□□□□ -0.82
USP3-219ENST00000561326 CSNK1G2P78368 415 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 REEP5Q00765 189 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 HMGCS1Q01581 520 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 MEF2AQ02078 507 aaPredicted RBP9.9□□□□□ -0.82
USP3-219ENST00000561326 ACSM2AQ08AH3 577 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 BNIP3Q12983 259 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 HERC3Q15034 1050 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 SLC5A12Q1EHB4 618 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 HLA-BQ31612 363 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 RFTN2Q52LD8 501 aaPredicted RBP9.9□□□□□ -0.82
USP3-219ENST00000561326 PDCD4Q53EL6 469 aaKnown RBP9.9□□□□□ -0.82
USP3-219ENST00000561326 AGKQ53H12 422 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 SPIN4Q56A73 249 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 C6orf132Q5T0Z8 1188 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.9□□□□□ -0.82
USP3-219ENST00000561326 IL23RQ5VWK5 629 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 ACSM2BQ68CK6 577 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 SLC23A3Q6PIS1 610 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 ZC3H14Q6PJT7 736 aaKnown RBP9.9□□□□□ -0.82
USP3-219ENST00000561326 C17orf82Q86X59 251 aaPredicted RBP9.9□□□□□ -0.82
USP3-219ENST00000561326 TRPV3Q8NET8 790 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 OR6C4Q8NGE1 309 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 TSPEARQ8WU66 669 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 JPH3Q8WXH2 748 aaPredicted RBP9.9□□□□□ -0.82
USP3-219ENST00000561326 OR2A14Q96R47 310 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 ZBTB18Q99592 522 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 NRTNQ99748 197 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 ACPTQ9BZG2 426 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 ZNF385DQ9H6B1 395 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 SDR39U1Q9NRG7 319 aaPredicted RBP9.9□□□□□ -0.82
USP3-219ENST00000561326 AIG1Q9NVV5 245 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 UCKL1Q9NWZ5 548 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 ASIC5Q9NY37 505 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 NLGN3Q9NZ94 848 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 ANKMY1Q9P2S6 941 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 MAPRE3Q9UPY8 281 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 RUVBL1Q9Y265 456 aaKnown RBP9.9□□□□□ -0.82
USP3-219ENST00000561326 GPR45Q9Y5Y3 372 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 NUP214P35658 2090 aaPredicted RBP9.9□□□□□ -0.82
USP3-219ENST00000561326 SCN3AQ9NY46 2000 aa9.9□□□□□ -0.82
USP3-219ENST00000561326 LOC100653049A0A140TA62 436 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 DYTNA2CJ06 578 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 B2RBV5 119 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 PPM1DO15297 605 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 MAP3K7O43318 606 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 GALR2O43603 387 aaPredicted RBP9.89□□□□□ -0.83
USP3-219ENST00000561326 NUDT21O43809 227 aaKnown RBP9.89□□□□□ -0.83
USP3-219ENST00000561326 NOBOXO60393 691 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 CLEC3AO75596 197 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 KRT34O76011 436 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 UBXN7O94888 489 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 CBX6O95503 412 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 ALDOCP09972 364 aaKnown RBP9.89□□□□□ -0.83
USP3-219ENST00000561326 T-ENOLP0DO92 83 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 UGT2B7P16662 529 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 GPX3P22352 226 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 GPR3P46089 330 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 SCTRP47872 440 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 EPHA4P54764 986 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 MAZP56270 477 aaKnown RBP9.89□□□□□ -0.83
USP3-219ENST00000561326 RPS15AP62244 130 aaKnown RBP9.89□□□□□ -0.83
USP3-219ENST00000561326 RPS13P62277 151 aaKnown RBP9.89□□□□□ -0.83
USP3-219ENST00000561326 RPL38P63173 70 aaKnown RBP9.89□□□□□ -0.83
USP3-219ENST00000561326 MXRA7P84157 204 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 RELAQ04206 551 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 DMTNQ08495 405 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 CUL3Q13618 768 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 MMEL1Q495T6 779 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 KIAA1614Q5VZ46 1190 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 FIGLAQ6QHK4 219 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 SPESP1Q6UW49 350 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 TREML1Q86YW5 311 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 SLC25A45Q8N413 288 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 ARL10Q8N8L6 244 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 GPR156Q8NFN8 814 aa9.89□□□□□ -0.83
USP3-219ENST00000561326 THAP11Q96EK4 314 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms