RNA–Protein interactions for RNA: ENST00000560428.1

TNFAIP2-206, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 773 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-206ENST00000560428 IRAK1BP1Q5VVH5 260 aa17.11■□□□□ 0.33
TNFAIP2-206ENST00000560428 AMER3Q8N944 861 aa17.11■□□□□ 0.33
TNFAIP2-206ENST00000560428 GPATCH11Q8N954 259 aa17.11■□□□□ 0.33
TNFAIP2-206ENST00000560428 BBOF1Q8ND07 529 aa17.11■□□□□ 0.33
TNFAIP2-206ENST00000560428 MMABQ96EY8 250 aaPredicted RBP17.11■□□□□ 0.33
TNFAIP2-206ENST00000560428 SGPP1Q9BX95 441 aa17.11■□□□□ 0.33
TNFAIP2-206ENST00000560428 FAM129AQ9BZQ8 928 aa17.11■□□□□ 0.33
TNFAIP2-206ENST00000560428 TGIF2Q9GZN2 237 aa17.11■□□□□ 0.33
TNFAIP2-206ENST00000560428 MKKSQ9NPJ1 570 aaPredicted RBP17.11■□□□□ 0.33
TNFAIP2-206ENST00000560428 ZFATQ9P243 1243 aa17.11■□□□□ 0.33
TNFAIP2-206ENST00000560428 TRPC4Q9UBN4 977 aa17.11■□□□□ 0.33
TNFAIP2-206ENST00000560428 C3orf18Q9UK00 162 aa17.11■□□□□ 0.33
TNFAIP2-206ENST00000560428 B3GNT3Q9Y2A9 372 aa17.11■□□□□ 0.33
TNFAIP2-206ENST00000560428 PTPN13Q12923 2485 aa17.1■□□□□ 0.33
TNFAIP2-206ENST00000560428 HECTD1Q9ULT8 2610 aa17.1■□□□□ 0.33
TNFAIP2-206ENST00000560428 A0A1W2PQ72 361 aa17.1■□□□□ 0.33
TNFAIP2-206ENST00000560428 PABPN1LA6NDY0 278 aaKnown RBP17.1■□□□□ 0.33
TNFAIP2-206ENST00000560428 FOXS1O43638 330 aa17.1■□□□□ 0.33
TNFAIP2-206ENST00000560428 HPP00738 406 aa17.1■□□□□ 0.33
TNFAIP2-206ENST00000560428 ENO2P09104 434 aaPredicted RBP17.1■□□□□ 0.33
TNFAIP2-206ENST00000560428 ACPPP15309 386 aa17.1■□□□□ 0.33
TNFAIP2-206ENST00000560428 MGAT5Q09328 741 aa17.1■□□□□ 0.33
TNFAIP2-206ENST00000560428 PDIA2Q13087 525 aaKnown RBP17.1■□□□□ 0.33
TNFAIP2-206ENST00000560428 VWA2Q5GFL6 755 aa17.1■□□□□ 0.33
TNFAIP2-206ENST00000560428 ATG9BQ674R7 924 aa17.1■□□□□ 0.33
TNFAIP2-206ENST00000560428 LCTLQ6UWM7 567 aa17.1■□□□□ 0.33
TNFAIP2-206ENST00000560428 MBOAT1Q6ZNC8 495 aa17.1■□□□□ 0.33
TNFAIP2-206ENST00000560428 SLC26A11Q86WA9 606 aa17.1■□□□□ 0.33
TNFAIP2-206ENST00000560428 C17orf64Q86WR6 236 aa17.1■□□□□ 0.33
TNFAIP2-206ENST00000560428 PLD3Q8IV08 490 aa17.1■□□□□ 0.33
TNFAIP2-206ENST00000560428 IQCKQ8N0W5 287 aa17.1■□□□□ 0.33
TNFAIP2-206ENST00000560428 ZADH2Q8N4Q0 377 aa17.1■□□□□ 0.33
TNFAIP2-206ENST00000560428 FAM26EQ8N5C1 309 aa17.1■□□□□ 0.33
TNFAIP2-206ENST00000560428 FBXO36Q8NEA4 188 aa17.1■□□□□ 0.33
TNFAIP2-206ENST00000560428 PDLIM5Q96HC4 596 aaKnown RBP17.1■□□□□ 0.33
TNFAIP2-206ENST00000560428 KRT12Q99456 494 aa17.1■□□□□ 0.33
TNFAIP2-206ENST00000560428 OLFM1Q99784 485 aa17.1■□□□□ 0.33
TNFAIP2-206ENST00000560428 HAUS8Q9BT25 410 aa17.1■□□□□ 0.33
TNFAIP2-206ENST00000560428 TRIM54Q9BYV2 358 aa17.1■□□□□ 0.33
TNFAIP2-206ENST00000560428 TRIM31Q9BZY9 425 aa17.1■□□□□ 0.33
TNFAIP2-206ENST00000560428 LHPPQ9H008 270 aa17.1■□□□□ 0.33
TNFAIP2-206ENST00000560428 ATG10Q9H0Y0 220 aa17.1■□□□□ 0.33
TNFAIP2-206ENST00000560428 PRRC2CQ9Y520 2896 aaKnown RBP17.09■□□□□ 0.33
TNFAIP2-206ENST00000560428 COL12A1Q99715 3063 aa17.09■□□□□ 0.33
TNFAIP2-206ENST00000560428 H0YIG0 161 aa17.09■□□□□ 0.33
TNFAIP2-206ENST00000560428 MAP2K7O14733 419 aa17.09■□□□□ 0.33
TNFAIP2-206ENST00000560428 RPL21P46778 160 aaKnown RBP17.09■□□□□ 0.33
TNFAIP2-206ENST00000560428 AVPR1BP47901 424 aa17.09■□□□□ 0.33
TNFAIP2-206ENST00000560428 CSNK1G2P78368 415 aa17.09■□□□□ 0.33
TNFAIP2-206ENST00000560428 ILF2Q12905 390 aaKnown RBP17.09■□□□□ 0.33
TNFAIP2-206ENST00000560428 NAE1Q13564 534 aa17.09■□□□□ 0.33
TNFAIP2-206ENST00000560428 AGAP7PQ5VUJ5 663 aa17.09■□□□□ 0.33
TNFAIP2-206ENST00000560428 DUPD1Q68J44 220 aa17.09■□□□□ 0.33
TNFAIP2-206ENST00000560428 CAPN13Q6MZZ7 669 aaPredicted RBP17.09■□□□□ 0.33
TNFAIP2-206ENST00000560428 IGFL2Q6UWQ7 119 aa17.09■□□□□ 0.33
TNFAIP2-206ENST00000560428 VN1R4Q7Z5H5 301 aa17.09■□□□□ 0.33
TNFAIP2-206ENST00000560428 ANKMY2Q8IV38 441 aa17.09■□□□□ 0.33
TNFAIP2-206ENST00000560428 ATL1Q8WXF7 558 aa17.09■□□□□ 0.33
TNFAIP2-206ENST00000560428 AGAP4Q96P64 663 aa17.09■□□□□ 0.33
TNFAIP2-206ENST00000560428 ARL15Q9NXU5 204 aa17.09■□□□□ 0.33
TNFAIP2-206ENST00000560428 NSMCE4AQ9NXX6 385 aa17.09■□□□□ 0.33
TNFAIP2-206ENST00000560428 MOCS1Q9NZB8 636 aa17.09■□□□□ 0.33
TNFAIP2-206ENST00000560428 LUZP4Q9P127 313 aa17.09■□□□□ 0.33
TNFAIP2-206ENST00000560428 SHANK1Q9Y566 2161 aa17.09■□□□□ 0.33
TNFAIP2-206ENST00000560428 LRRK2Q5S007 2527 aa17.09■□□□□ 0.33
TNFAIP2-206ENST00000560428 DOCK10Q96BY6 2186 aa17.08■□□□□ 0.33
TNFAIP2-206ENST00000560428 A0A0A6YYC8 382 aaPredicted RBP17.08■□□□□ 0.32
TNFAIP2-206ENST00000560428 FAM187AA6NFU0 413 aa17.08■□□□□ 0.32
TNFAIP2-206ENST00000560428 IDSB3KWA1 339 aa17.08■□□□□ 0.32
TNFAIP2-206ENST00000560428 I3L1I5 382 aaPredicted RBP17.08■□□□□ 0.32
TNFAIP2-206ENST00000560428 ALOX12BO75342 701 aa17.08■□□□□ 0.32
TNFAIP2-206ENST00000560428 NSA2O95478 260 aaKnown RBP17.08■□□□□ 0.32
TNFAIP2-206ENST00000560428 NPPBP16860 134 aa17.08■□□□□ 0.32
TNFAIP2-206ENST00000560428 ZNF37AP17032 561 aaPredicted RBP17.08■□□□□ 0.32
TNFAIP2-206ENST00000560428 GRK3P35626 688 aa17.08■□□□□ 0.32
TNFAIP2-206ENST00000560428 EMP2P54851 167 aa17.08■□□□□ 0.32
TNFAIP2-206ENST00000560428 FASTKD3Q14CZ7 662 aaKnown RBP17.08■□□□□ 0.32
TNFAIP2-206ENST00000560428 PLEKHN1Q494U1 663 aaPredicted RBP17.08■□□□□ 0.32
TNFAIP2-206ENST00000560428 Q6ZS92 163 aa17.08■□□□□ 0.32
TNFAIP2-206ENST00000560428 LAPTM4BQ86VI4 370 aa17.08■□□□□ 0.32
TNFAIP2-206ENST00000560428 ZC3HC1Q86WB0 502 aaKnown RBP17.08■□□□□ 0.32
TNFAIP2-206ENST00000560428 PRSS58Q8IYP2 241 aa17.08■□□□□ 0.32
TNFAIP2-206ENST00000560428 CAMKVQ8NCB2 501 aa17.08■□□□□ 0.32
TNFAIP2-206ENST00000560428 OR56A3Q8NH54 315 aa17.08■□□□□ 0.32
TNFAIP2-206ENST00000560428 PPP4R1Q8TF05 950 aa17.08■□□□□ 0.32
TNFAIP2-206ENST00000560428 ANKRD7Q92527 254 aa17.08■□□□□ 0.32
TNFAIP2-206ENST00000560428 FBXL8Q96CD0 374 aa17.08■□□□□ 0.32
TNFAIP2-206ENST00000560428 TM4SF19Q96DZ7 209 aa17.08■□□□□ 0.32
TNFAIP2-206ENST00000560428 SARGQ9BW04 601 aa17.08■□□□□ 0.32
TNFAIP2-206ENST00000560428 YIPF2Q9BWQ6 316 aa17.08■□□□□ 0.32
TNFAIP2-206ENST00000560428 SLC29A3Q9BZD2 475 aa17.08■□□□□ 0.32
TNFAIP2-206ENST00000560428 ILKAPQ9H0C8 392 aaPredicted RBP17.08■□□□□ 0.32
TNFAIP2-206ENST00000560428 NOVA2Q9UNW9 492 aaKnown RBP17.08■□□□□ 0.32
TNFAIP2-206ENST00000560428 SH2B3Q9UQQ2 575 aa17.08■□□□□ 0.32
TNFAIP2-206ENST00000560428 SNX24Q9Y343 169 aa17.08■□□□□ 0.32
TNFAIP2-206ENST00000560428 PSAT1Q9Y617 370 aa17.08■□□□□ 0.32
TNFAIP2-206ENST00000560428 CYC1P08574 325 aa17.07■□□□□ 0.32
TNFAIP2-206ENST00000560428 CDH1P12830 882 aa17.07■□□□□ 0.32
TNFAIP2-206ENST00000560428 CXCR2P25025 360 aa17.07■□□□□ 0.32
TNFAIP2-206ENST00000560428 SRSF1Q07955 248 aaKnown RBP eCLIP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms