RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 DKKL1Q9UK85 242 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 A0A0A6YYH2 397 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 A6NJ64 397 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 HCRTR2O43614 444 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 OC90Q02509 493 aaPredicted RBP13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 PLGLAQ15195 96 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 GPR68Q15743 365 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 INAVAQ3KP66 663 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 OR13C3Q8NGS6 347 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 OR14C36Q8NHC7 312 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 RGMAQ96B86 450 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 DUSP26Q9BV47 211 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 RAB9BQ9NP90 201 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 GPRC5BQ9NZH0 403 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 PCDHGA6Q9Y5G7 932 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 ZNF850A8MQ14 1090 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 RNASEH2AO75792 299 aaKnown RBP13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 PRNPP04156 253 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 LEPRP48357 1165 aaKnown RBP13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 DSTNP60981 165 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 ACTR1AP61163 376 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 PRAMEF18Q5VWM3 479 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 TSPAN33Q86UF1 283 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 ASCC1Q8N9N2 400 aaKnown RBP13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 PPP4R1LQ9P1A2 415 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 A0A1W2PPL8 197 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 SERPINA7P05543 415 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 HTR7P34969 479 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 NDUFV1P49821 464 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 RAB30Q15771 203 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 PDE12Q6L8Q7 609 aaKnown RBP13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 VSTM1Q6UX27 236 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 S100A7AQ86SG5 101 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 RPLP0P6Q8NHW5 317 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 USB1Q9BQ65 265 aaKnown RBP13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 NUSAP1Q9BXS6 441 aaKnown RBP13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 OR2S2Q9NQN1 319 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 FLRT1Q9NZU1 646 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 A0A1W2PPM1 405 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 SLC25A52Q3SY17 297 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 KCNIP4Q6PIL6 250 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 DPY19L4Q7Z388 723 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 NIFKQ9BYG3 293 aaKnown RBP13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 SPATC1LQ9H0A9 340 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 HIF1ANQ9NWT6 349 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 GTF2IRD1Q9UHL9 959 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 SALL1Q9NSC2 1324 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 CLDN11O75508 207 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 OR8U9P0C7N5 309 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 GP1BBP13224 206 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 NRIP1P48552 1158 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 BLKP51451 505 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 MPP1Q00013 466 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 GBE1Q04446 702 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 GID4Q8IVV7 300 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 GNPDA2Q8TDQ7 276 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 SLC22A17Q8WUG5 538 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 BTBD1Q9H0C5 482 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 RAI2Q9Y5P3 530 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 SP2Q02086 613 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 SPIN4Q56A73 249 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 GPR21Q99679 349 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 GFOD1Q9NXC2 390 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 KLRF1Q9NZS2 232 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 PTPRJQ12913 1337 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 INMTO95050 263 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 CHRNB1P11230 501 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 NOMO2Q5JPE7 1267 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 PHF13Q86YI8 300 aaPredicted RBP13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 PGAP3Q96FM1 320 aaPredicted RBP13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 PHOX2BQ99453 314 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 GLOD4Q9HC38 313 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 RNF215Q9Y6U7 377 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 MAGI2Q86UL8 1455 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 PAGE1O75459 146 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 SNCGO76070 127 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 RPS14P62263 151 aaKnown RBP13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 FAM46DQ8NEK8 389 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 TMEM125Q96AQ2 219 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 SLC22A18Q96BI1 424 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 TGM7Q96PF1 710 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 LRRC42Q9Y546 428 aa13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 DNMT3AQ9Y6K1 912 aaPredicted RBP13.49□□□□□ -0.25
CSPG4P12-202ENST00000559989 QPCTQ16769 361 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 ZNF404Q494X3 552 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 TNFAIP8L2Q6P589 184 aaPredicted RBP13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 MBOAT1Q6ZNC8 495 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 PACRGLQ8N7B6 248 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 AQP11Q8NBQ7 271 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 ZDHHC12Q96GR4 267 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 DPYSL5Q9BPU6 564 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 CCDC32Q9BV29 185 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 HPSEQ9Y251 543 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 PCDHGA2Q9Y5H1 932 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 BACE2Q9Y5Z0 518 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 GPR75-ASB3A0A0A6YYF3 556 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 CDK14O94921 469 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 ASPAP45381 313 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 LSSP48449 732 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 PRMT2P55345 433 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms