RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 MEF2AQ02078 507 aaPredicted RBP16.84■□□□□ 0.29
HDDC3-205ENST00000559898 NAE1Q13564 534 aa16.84■□□□□ 0.29
HDDC3-205ENST00000559898 ZNF460Q14592 562 aa16.84■□□□□ 0.29
HDDC3-205ENST00000559898 NR6A1Q15406 480 aa16.84■□□□□ 0.29
HDDC3-205ENST00000559898 HECTD2Q5U5R9 776 aa16.84■□□□□ 0.29
HDDC3-205ENST00000559898 STEAP4Q687X5 459 aa16.84■□□□□ 0.29
HDDC3-205ENST00000559898 PRMT9Q6P2P2 845 aa16.84■□□□□ 0.29
HDDC3-205ENST00000559898 AGTRAPQ6RW13 159 aa16.84■□□□□ 0.29
HDDC3-205ENST00000559898 Q6ZS92 163 aa16.84■□□□□ 0.29
HDDC3-205ENST00000559898 CTAGE6Q86UF2 777 aa16.84■□□□□ 0.29
HDDC3-205ENST00000559898 ZC3H7AQ8IWR0 971 aaKnown RBP16.84■□□□□ 0.29
HDDC3-205ENST00000559898 CATSPER1Q8NEC5 780 aa16.84■□□□□ 0.29
HDDC3-205ENST00000559898 OR9A4Q8NGU2 314 aa16.84■□□□□ 0.29
HDDC3-205ENST00000559898 PYCR2Q96C36 320 aa16.84■□□□□ 0.29
HDDC3-205ENST00000559898 SPNS1Q9H2V7 528 aa16.84■□□□□ 0.29
HDDC3-205ENST00000559898 SEMA3GQ9NS98 782 aa16.84■□□□□ 0.29
HDDC3-205ENST00000559898 G3BP2Q9UN86 482 aaKnown RBP16.84■□□□□ 0.29
HDDC3-205ENST00000559898 IDSB3KWA1 339 aa16.83■□□□□ 0.28
HDDC3-205ENST00000559898 DNAJB6O75190 326 aa16.83■□□□□ 0.28
HDDC3-205ENST00000559898 B3GALT4O96024 378 aa16.83■□□□□ 0.28
HDDC3-205ENST00000559898 CDH1P12830 882 aa16.83■□□□□ 0.28
HDDC3-205ENST00000559898 FDXRP22570 491 aa16.83■□□□□ 0.28
HDDC3-205ENST00000559898 HSD17B2P37059 387 aa16.83■□□□□ 0.28
HDDC3-205ENST00000559898 BCL6P41182 706 aa16.83■□□□□ 0.28
HDDC3-205ENST00000559898 GLRBP48167 497 aa16.83■□□□□ 0.28
HDDC3-205ENST00000559898 DR1Q01658 176 aa16.83■□□□□ 0.28
HDDC3-205ENST00000559898 OCA2Q04671 838 aa16.83■□□□□ 0.28
HDDC3-205ENST00000559898 SRSF11Q05519 484 aaKnown RBP16.83■□□□□ 0.28
HDDC3-205ENST00000559898 DSG2Q14126 1118 aa16.83■□□□□ 0.28
HDDC3-205ENST00000559898 LINC00696Q6ZRV3 163 aa16.83■□□□□ 0.28
HDDC3-205ENST00000559898 C17orf53Q8N3J3 647 aaPredicted RBP16.83■□□□□ 0.28
HDDC3-205ENST00000559898 GPATCH11Q8N954 259 aa16.83■□□□□ 0.28
HDDC3-205ENST00000559898 KCT2Q8NC54 265 aa16.83■□□□□ 0.28
HDDC3-205ENST00000559898 PSMF1Q92530 271 aa16.83■□□□□ 0.28
HDDC3-205ENST00000559898 MOCOSQ96EN8 888 aa16.83■□□□□ 0.28
HDDC3-205ENST00000559898 PDLIM2Q96JY6 352 aa16.83■□□□□ 0.28
HDDC3-205ENST00000559898 OR4K3Q96R72 315 aa16.83■□□□□ 0.28
HDDC3-205ENST00000559898 PPANQ9NQ55 473 aaKnown RBP16.83■□□□□ 0.28
HDDC3-205ENST00000559898 CCDC177Q9NQR7 707 aaPredicted RBP16.83■□□□□ 0.28
HDDC3-205ENST00000559898 TAS2R13Q9NYV9 303 aa16.83■□□□□ 0.28
HDDC3-205ENST00000559898 NXT1Q9UKK6 140 aaKnown RBP16.83■□□□□ 0.28
HDDC3-205ENST00000559898 PCDHGA10Q9Y5H3 936 aa16.83■□□□□ 0.28
HDDC3-205ENST00000559898 CPAMD8Q8IZJ3 1885 aa16.82■□□□□ 0.28
HDDC3-205ENST00000559898 IGHV3-20A0A0C4DH32 117 aa16.82■□□□□ 0.28
HDDC3-205ENST00000559898 CCNDBP1O95273 360 aa16.82■□□□□ 0.28
HDDC3-205ENST00000559898 F10P00742 488 aa16.82■□□□□ 0.28
HDDC3-205ENST00000559898 ACPPP15309 386 aa16.82■□□□□ 0.28
HDDC3-205ENST00000559898 IL1RNP18510 177 aa16.82■□□□□ 0.28
HDDC3-205ENST00000559898 RPL21P46778 160 aaKnown RBP16.82■□□□□ 0.28
HDDC3-205ENST00000559898 ST13P50502 369 aaKnown RBP16.82■□□□□ 0.28
HDDC3-205ENST00000559898 EMP2P54851 167 aa16.82■□□□□ 0.28
HDDC3-205ENST00000559898 ABATP80404 500 aa16.82■□□□□ 0.28
HDDC3-205ENST00000559898 IGFL2Q6UWQ7 119 aa16.82■□□□□ 0.28
HDDC3-205ENST00000559898 PCGF5Q86SE9 256 aa16.82■□□□□ 0.28
HDDC3-205ENST00000559898 PDSS2Q86YH6 399 aa16.82■□□□□ 0.28
HDDC3-205ENST00000559898 ZADH2Q8N4Q0 377 aa16.82■□□□□ 0.28
HDDC3-205ENST00000559898 ZCCHC10Q8TBK6 192 aa16.82■□□□□ 0.28
HDDC3-205ENST00000559898 RERGQ96A58 199 aaPredicted RBP16.82■□□□□ 0.28
HDDC3-205ENST00000559898 SGPP1Q9BX95 441 aa16.82■□□□□ 0.28
HDDC3-205ENST00000559898 LHPPQ9H008 270 aa16.82■□□□□ 0.28
HDDC3-205ENST00000559898 ILKAPQ9H0C8 392 aaPredicted RBP16.82■□□□□ 0.28
HDDC3-205ENST00000559898 PARVBQ9HBI1 364 aa16.82■□□□□ 0.28
HDDC3-205ENST00000559898 SMYD2Q9NRG4 433 aa16.82■□□□□ 0.28
HDDC3-205ENST00000559898 TMEM184CQ9NVA4 438 aa16.82■□□□□ 0.28
HDDC3-205ENST00000559898 NOVA2Q9UNW9 492 aaKnown RBP16.82■□□□□ 0.28
HDDC3-205ENST00000559898 SNX24Q9Y343 169 aa16.82■□□□□ 0.28
HDDC3-205ENST00000559898 USP9YO00507 2555 aaPredicted RBP16.82■□□□□ 0.28
HDDC3-205ENST00000559898 ICE1Q9Y2F5 2266 aa16.81■□□□□ 0.28
HDDC3-205ENST00000559898 ZNF839A8K0R7 811 aa16.81■□□□□ 0.28
HDDC3-205ENST00000559898 SGK494L7N484 410 aa16.81■□□□□ 0.28
HDDC3-205ENST00000559898 EIF3FO00303 357 aaPredicted RBP16.81■□□□□ 0.28
HDDC3-205ENST00000559898 MAP2K7O14733 419 aa16.81■□□□□ 0.28
HDDC3-205ENST00000559898 SEC31AO94979 1220 aaKnown RBP16.81■□□□□ 0.28
HDDC3-205ENST00000559898 CBX6O95503 412 aa16.81■□□□□ 0.28
HDDC3-205ENST00000559898 TTC4O95801 387 aa16.81■□□□□ 0.28
HDDC3-205ENST00000559898 HPP00738 406 aa16.81■□□□□ 0.28
HDDC3-205ENST00000559898 IGHEP01854 428 aa16.81■□□□□ 0.28
HDDC3-205ENST00000559898 NPPBP16860 134 aa16.81■□□□□ 0.28
HDDC3-205ENST00000559898 EMP3P54852 163 aa16.81■□□□□ 0.28
HDDC3-205ENST00000559898 MORF4L2Q15014 288 aa16.81■□□□□ 0.28
HDDC3-205ENST00000559898 PCOLCEQ15113 449 aa16.81■□□□□ 0.28
HDDC3-205ENST00000559898 B3GNTL1Q67FW5 361 aaPredicted RBP16.81■□□□□ 0.28
HDDC3-205ENST00000559898 LANCL3Q6ZV70 420 aa16.81■□□□□ 0.28
HDDC3-205ENST00000559898 HPS6Q86YV9 775 aa16.81■□□□□ 0.28
HDDC3-205ENST00000559898 IQCKQ8N0W5 287 aa16.81■□□□□ 0.28
HDDC3-205ENST00000559898 MYO1HQ8N1T3 1032 aa16.81■□□□□ 0.28
HDDC3-205ENST00000559898 SIRT6Q8N6T7 355 aa16.81■□□□□ 0.28
HDDC3-205ENST00000559898 ZNF740Q8NDX6 193 aa16.81■□□□□ 0.28
HDDC3-205ENST00000559898 PRR7Q8TB68 274 aa16.81■□□□□ 0.28
HDDC3-205ENST00000559898 MCOLN3Q8TDD5 553 aa16.81■□□□□ 0.28
HDDC3-205ENST00000559898 TM4SF19Q96DZ7 209 aa16.81■□□□□ 0.28
HDDC3-205ENST00000559898 CNDP1Q96KN2 507 aa16.81■□□□□ 0.28
HDDC3-205ENST00000559898 KRT12Q99456 494 aa16.81■□□□□ 0.28
HDDC3-205ENST00000559898 NAPGQ99747 312 aaPredicted RBP16.81■□□□□ 0.28
HDDC3-205ENST00000559898 DRC3Q9H069 523 aa16.81■□□□□ 0.28
HDDC3-205ENST00000559898 PLA2G3Q9NZ20 509 aa16.81■□□□□ 0.28
HDDC3-205ENST00000559898 HCN3Q9P1Z3 774 aa16.81■□□□□ 0.28
HDDC3-205ENST00000559898 HIVEP3Q5T1R4 2406 aa16.8■□□□□ 0.28
HDDC3-205ENST00000559898 IGHV1-45A0A0A0MS14 117 aa16.8■□□□□ 0.28
HDDC3-205ENST00000559898 CDC7O00311 574 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms