RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 ZNF33BQ06732 778 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 RBBP5Q15291 538 aaKnown RBP10.6□□□□□ -0.71
TMEM260-208ENST00000555905 UGT3A2Q3SY77 523 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 SGO1Q5FBB7 561 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 PERM1Q5SV97 790 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 GKAP1Q5VSY0 366 aaPredicted RBP10.6□□□□□ -0.71
TMEM260-208ENST00000555905 FRG2Q64ET8 278 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 CGB2Q6NT52 195 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 FIGLAQ6QHK4 219 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 WDR74Q6RFH5 385 aaPredicted RBP10.6□□□□□ -0.71
TMEM260-208ENST00000555905 TMIGD1Q6UXZ0 262 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 TRIM73Q86UV7 250 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 FAM129CQ86XR2 697 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 NAXDQ8IW45 347 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 FAM20CQ8IXL6 584 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 RFWD2Q8NHY2 731 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 ZUFSPQ96AP4 578 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 C19orf60Q96EN9 201 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 TGM7Q96PF1 710 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 FRG2BQ96QU4 278 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 CCDC3Q9BQI4 270 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 PLCD4Q9BRC7 762 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 NUF2Q9BZD4 464 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 SEMA6CQ9H3T2 930 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 NT5DC2Q9H857 520 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 RXFP3Q9NSD7 469 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 ADGRE2Q9UHX3 823 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 ZNF490Q9ULM2 529 aaPredicted RBP10.6□□□□□ -0.71
TMEM260-208ENST00000555905 APOBEC2Q9Y235 224 aaKnown RBP10.6□□□□□ -0.71
TMEM260-208ENST00000555905 DNAJC15Q9Y5T4 150 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 HEATR5BQ9P2D3 2071 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 MYO15AQ9UKN7 3530 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 SNRNP200O75643 2136 aaKnown RBP10.6□□□□□ -0.71
TMEM260-208ENST00000555905 IGKV1-8A0A0C4DH67 115 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 TRBC2A0A5B9 178 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 TLCD2A6NGC4 264 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 SLC28A1O00337 649 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 NDUFAB1O14561 156 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 PIP5K1BO14986 540 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 OR1F1O43749 312 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 SH3BP5O60239 455 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 SNX3O60493 162 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 DIAPH2O60879 1101 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 VPS4BO75351 444 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 RASSF9O75901 435 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 RPLP0P05388 317 aaKnown RBP10.59□□□□□ -0.71
TMEM260-208ENST00000555905 LINC00032P0C843 101 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 EZRP15311 586 aaKnown RBP10.59□□□□□ -0.71
TMEM260-208ENST00000555905 ALOX15P16050 662 aaPredicted RBP10.59□□□□□ -0.71
TMEM260-208ENST00000555905 MAGP20916 626 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 TGM1P22735 817 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 ACP1P24666 158 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 CD1CP29017 333 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 ARFIP2P53365 341 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 RPS15AP62244 130 aaKnown RBP10.59□□□□□ -0.71
TMEM260-208ENST00000555905 MEF2AQ02078 507 aaPredicted RBP10.59□□□□□ -0.71
TMEM260-208ENST00000555905 BTKQ06187 659 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 SF3A3Q12874 501 aaKnown RBP eCLIP10.59□□□□□ -0.71
TMEM260-208ENST00000555905 SQSTM1Q13501 440 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 ABRAXAS2Q15018 415 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 TCHHL1Q5QJ38 904 aaPredicted RBP10.59□□□□□ -0.71
TMEM260-208ENST00000555905 ZNF425Q6IV72 752 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 RNF165Q6ZSG1 346 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 FAM92BQ6ZTR7 304 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 ACAD11Q709F0 780 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 USP53Q70EK8 1073 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 PAQR7Q86WK9 346 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 LAS2Q8IYD9 372 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 CARFQ8N187 725 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 TTLQ8NG68 377 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 OR7G3Q8NG95 312 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 BCAS4Q8TDM0 211 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 SELENOMQ8WWX9 145 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 MTFMTQ96DP5 389 aaKnown RBP10.59□□□□□ -0.71
TMEM260-208ENST00000555905 CDC6Q99741 560 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 DPYSL5Q9BPU6 564 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 LRRN3Q9H3W5 708 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 C1GALT1Q9NS00 363 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 RIC8BQ9NVN3 520 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 BTRCQ9Y297 605 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 KLHL20Q9Y2M5 609 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 KLK4Q9Y5K2 254 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 MUC6Q6W4X9 2439 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 DMDP11532 3685 aa10.59□□□□□ -0.71
TMEM260-208ENST00000555905 FEZF1A0PJY2 475 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 OR2A25A4D2G3 310 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 ANKDD1BA6NHY2 528 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 SLC9B1P1A6NJY1 282 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 ZNF195O14628 629 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 HAT1O14929 419 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 RGS14O43566 566 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 CPNE6O95741 557 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 PDYNP01213 254 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 GP1BAP07359 652 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 PVRP15151 417 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 GSTM2P28161 218 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 PIK3CBP42338 1070 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 LSSP48449 732 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 IDH3AP50213 366 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 NEK2P51955 445 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms