RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 PGM3O95394 542 aa2.71□□□□□ -1.98
SNX6-204ENST00000555541 MELTFP08582 738 aa2.71□□□□□ -1.98
SNX6-204ENST00000555541 CLDN15P56746 228 aa2.71□□□□□ -1.98
SNX6-204ENST00000555541 DCDC1P59894 354 aa2.71□□□□□ -1.98
SNX6-204ENST00000555541 DHODHQ02127 395 aa2.71□□□□□ -1.98
SNX6-204ENST00000555541 NPTX1Q15818 432 aa2.71□□□□□ -1.98
SNX6-204ENST00000555541 SPECC1Q5M775 1068 aa2.71□□□□□ -1.98
SNX6-204ENST00000555541 FAM182AQ5T1J6 154 aa2.71□□□□□ -1.98
SNX6-204ENST00000555541 ITPRIPL1Q6GPH6 555 aa2.71□□□□□ -1.98
SNX6-204ENST00000555541 SYT2Q8N9I0 419 aaPredicted RBP2.71□□□□□ -1.98
SNX6-204ENST00000555541 NOA1Q8NC60 698 aaKnown RBP2.71□□□□□ -1.98
SNX6-204ENST00000555541 OR10G7Q8NGN6 311 aa2.71□□□□□ -1.98
SNX6-204ENST00000555541 ZNF597Q96LX8 424 aa2.71□□□□□ -1.98
SNX6-204ENST00000555541 ABHD1Q96SE0 405 aa2.71□□□□□ -1.98
SNX6-204ENST00000555541 NOL11Q9H8H0 719 aaKnown RBP2.71□□□□□ -1.98
SNX6-204ENST00000555541 CDH20Q9HBT6 801 aa2.71□□□□□ -1.98
SNX6-204ENST00000555541 GTSE1Q9NYZ3 720 aa2.71□□□□□ -1.98
SNX6-204ENST00000555541 ZNF107Q9UII5 783 aaPredicted RBP2.71□□□□□ -1.98
SNX6-204ENST00000555541 CPSF3Q9UKF6 684 aaKnown RBP2.71□□□□□ -1.98
SNX6-204ENST00000555541 PCDHGB4Q9UN71 923 aa2.71□□□□□ -1.98
SNX6-204ENST00000555541 GPR34Q9UPC5 381 aa2.71□□□□□ -1.98
SNX6-204ENST00000555541 ANKRD18BA2A2Z9 1011 aa2.7□□□□□ -1.98
SNX6-204ENST00000555541 SURF4O15260 269 aa2.7□□□□□ -1.98
SNX6-204ENST00000555541 TLX2O43763 284 aaPredicted RBP2.7□□□□□ -1.98
SNX6-204ENST00000555541 GPRIN2O60269 458 aa2.7□□□□□ -1.98
SNX6-204ENST00000555541 GALR3O60755 368 aaPredicted RBP2.7□□□□□ -1.98
SNX6-204ENST00000555541 LRCH4O75427 683 aa2.7□□□□□ -1.98
SNX6-204ENST00000555541 BAG3O95817 575 aa2.7□□□□□ -1.98
SNX6-204ENST00000555541 CSN3P07498 182 aa2.7□□□□□ -1.98
SNX6-204ENST00000555541 SAGP10523 405 aaPredicted RBP2.7□□□□□ -1.98
SNX6-204ENST00000555541 EPCAMP16422 314 aa2.7□□□□□ -1.98
SNX6-204ENST00000555541 CD22P20273 847 aa2.7□□□□□ -1.98
SNX6-204ENST00000555541 ASCL1P50553 236 aa2.7□□□□□ -1.98
SNX6-204ENST00000555541 EIPR1Q53HC9 387 aa2.7□□□□□ -1.98
SNX6-204ENST00000555541 CEACAM19Q7Z692 300 aa2.7□□□□□ -1.98
SNX6-204ENST00000555541 SUMF1Q8NBK3 374 aa2.7□□□□□ -1.98
SNX6-204ENST00000555541 TYMSOSQ8TAI1 123 aa2.7□□□□□ -1.98
SNX6-204ENST00000555541 DGAT2Q96PD7 388 aa2.7□□□□□ -1.98
SNX6-204ENST00000555541 GCNAQ96QF7 691 aa2.7□□□□□ -1.98
SNX6-204ENST00000555541 PSMB7Q99436 277 aa2.7□□□□□ -1.98
SNX6-204ENST00000555541 CDCA3Q99618 268 aaPredicted RBP2.7□□□□□ -1.98
SNX6-204ENST00000555541 ATF6BQ99941 703 aa2.7□□□□□ -1.98
SNX6-204ENST00000555541 GPR88Q9GZN0 384 aa2.7□□□□□ -1.98
SNX6-204ENST00000555541 EGLN3Q9H6Z9 239 aa2.7□□□□□ -1.98
SNX6-204ENST00000555541 STYXL1Q9Y6J8 313 aa2.7□□□□□ -1.98
SNX6-204ENST00000555541 CCL24O00175 119 aa2.69□□□□□ -1.98
SNX6-204ENST00000555541 BEST1O76090 585 aa2.69□□□□□ -1.98
SNX6-204ENST00000555541 HPP00738 406 aa2.69□□□□□ -1.98
SNX6-204ENST00000555541 AADACP22760 399 aa2.69□□□□□ -1.98
SNX6-204ENST00000555541 LIG4P49917 911 aa2.69□□□□□ -1.98
SNX6-204ENST00000555541 POLR2LP62875 67 aaKnown RBP2.69□□□□□ -1.98
SNX6-204ENST00000555541 IL11RAQ14626 422 aa2.69□□□□□ -1.98
SNX6-204ENST00000555541 PTPRCAPQ14761 206 aa2.69□□□□□ -1.98
SNX6-204ENST00000555541 OPCMLQ14982 345 aa2.69□□□□□ -1.98
SNX6-204ENST00000555541 VWC2Q2TAL6 325 aa2.69□□□□□ -1.98
SNX6-204ENST00000555541 C6orf163Q5TEZ5 329 aa2.69□□□□□ -1.98
SNX6-204ENST00000555541 SLC24A5Q71RS6 500 aa2.69□□□□□ -1.98
SNX6-204ENST00000555541 TIPARPQ7Z3E1 657 aaKnown RBP2.69□□□□□ -1.98
SNX6-204ENST00000555541 CAMKMTQ7Z624 323 aa2.69□□□□□ -1.98
SNX6-204ENST00000555541 KCNMB4Q86W47 210 aa2.69□□□□□ -1.98
SNX6-204ENST00000555541 GPC2Q8N158 579 aa2.69□□□□□ -1.98
SNX6-204ENST00000555541 RASGEF1AQ8N9B8 481 aa2.69□□□□□ -1.98
SNX6-204ENST00000555541 OR4D10Q8NGI6 311 aa2.69□□□□□ -1.98
SNX6-204ENST00000555541 CHURC1Q8WUH1 139 aa2.69□□□□□ -1.98
SNX6-204ENST00000555541 TEKT4Q8WW24 435 aa2.69□□□□□ -1.98
SNX6-204ENST00000555541 METTL21AQ8WXB1 218 aa2.69□□□□□ -1.98
SNX6-204ENST00000555541 MUS81Q96NY9 551 aa2.69□□□□□ -1.98
SNX6-204ENST00000555541 FEVQ99581 238 aa2.69□□□□□ -1.98
SNX6-204ENST00000555541 CPNE1Q99829 537 aa2.69□□□□□ -1.98
SNX6-204ENST00000555541 CCDC106Q9BWC9 280 aa2.69□□□□□ -1.98
SNX6-204ENST00000555541 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
SNX6-204ENST00000555541 SLC2A11Q9BYW1 496 aa2.69□□□□□ -1.98
SNX6-204ENST00000555541 DNAI2Q9GZS0 605 aa2.69□□□□□ -1.98
SNX6-204ENST00000555541 CNOT10Q9H9A5 744 aaKnown RBP2.69□□□□□ -1.98
SNX6-204ENST00000555541 PIH1D3Q9NQM4 214 aaKnown RBP2.69□□□□□ -1.98
SNX6-204ENST00000555541 CPSF2Q9P2I0 782 aaKnown RBP2.69□□□□□ -1.98
SNX6-204ENST00000555541 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.69□□□□□ -1.98
SNX6-204ENST00000555541 KIF25-AS1Q9Y6Z4 181 aa2.69□□□□□ -1.98
SNX6-204ENST00000555541 FER1L5A0AVI2 2057 aa2.69□□□□□ -1.98
SNX6-204ENST00000555541 IGHV3-20A0A0C4DH32 117 aa2.68□□□□□ -1.98
SNX6-204ENST00000555541 IGHV3-38A0A0C4DH36 116 aa2.68□□□□□ -1.98
SNX6-204ENST00000555541 SLC1A7O00341 560 aa2.68□□□□□ -1.98
SNX6-204ENST00000555541 ADAM20O43506 726 aa2.68□□□□□ -1.98
SNX6-204ENST00000555541 SNX3O60493 162 aa2.68□□□□□ -1.98
SNX6-204ENST00000555541 ATP6AP2O75787 350 aa2.68□□□□□ -1.98
SNX6-204ENST00000555541 ACSL3O95573 720 aa2.68□□□□□ -1.98
SNX6-204ENST00000555541 ABCB1P08183 1280 aaPredicted RBP2.68□□□□□ -1.98
SNX6-204ENST00000555541 CYP11B2P19099 503 aa2.68□□□□□ -1.98
SNX6-204ENST00000555541 AOC1P19801 751 aa2.68□□□□□ -1.98
SNX6-204ENST00000555541 EDNRAP25101 427 aa2.68□□□□□ -1.98
SNX6-204ENST00000555541 EIF5P55010 431 aaKnown RBP2.68□□□□□ -1.98
SNX6-204ENST00000555541 SIM2Q14190 667 aaPredicted RBP2.68□□□□□ -1.98
SNX6-204ENST00000555541 ZNF146Q15072 292 aa2.68□□□□□ -1.98
SNX6-204ENST00000555541 RCOR2Q8IZ40 523 aa2.68□□□□□ -1.98
SNX6-204ENST00000555541 RYBPQ8N488 228 aaPredicted RBP2.68□□□□□ -1.98
SNX6-204ENST00000555541 TC2NQ8N9U0 490 aa2.68□□□□□ -1.98
SNX6-204ENST00000555541 KLHL30-AS1Q8NEE0 82 aa2.68□□□□□ -1.98
SNX6-204ENST00000555541 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.68□□□□□ -1.98
SNX6-204ENST00000555541 RFT1Q96AA3 541 aa2.68□□□□□ -1.98
SNX6-204ENST00000555541 KLHL5Q96PQ7 755 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms