RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 NKAPQ8N5F7 415 aaKnown RBP11.26□□□□□ -0.61
VRK1-204ENST00000555351 RBMXL3Q8N7X1 1067 aaKnown RBP11.26□□□□□ -0.61
VRK1-204ENST00000555351 AMER3Q8N944 861 aa11.26□□□□□ -0.61
VRK1-204ENST00000555351 SPATA4Q8NEY3 305 aa11.26□□□□□ -0.61
VRK1-204ENST00000555351 ABHD11Q8NFV4 315 aa11.26□□□□□ -0.61
VRK1-204ENST00000555351 OR11G2Q8NGC1 345 aa11.26□□□□□ -0.61
VRK1-204ENST00000555351 OR56A3Q8NH54 315 aa11.26□□□□□ -0.61
VRK1-204ENST00000555351 CPT1CQ8TCG5 803 aa11.26□□□□□ -0.61
VRK1-204ENST00000555351 FBXL8Q96CD0 374 aa11.26□□□□□ -0.61
VRK1-204ENST00000555351 TM4SF19Q96DZ7 209 aa11.26□□□□□ -0.61
VRK1-204ENST00000555351 CFAP36Q96G28 342 aa11.26□□□□□ -0.61
VRK1-204ENST00000555351 PRAP1Q96NZ9 151 aa11.26□□□□□ -0.61
VRK1-204ENST00000555351 KRT12Q99456 494 aa11.26□□□□□ -0.61
VRK1-204ENST00000555351 ERP44Q9BS26 406 aa11.26□□□□□ -0.61
VRK1-204ENST00000555351 CUEDC1Q9NWM3 386 aaPredicted RBP11.26□□□□□ -0.61
VRK1-204ENST00000555351 PLAAQ9Y263 795 aa11.26□□□□□ -0.61
VRK1-204ENST00000555351 B3GNT3Q9Y2A9 372 aa11.26□□□□□ -0.61
VRK1-204ENST00000555351 MAU2Q9Y6X3 613 aa11.26□□□□□ -0.61
VRK1-204ENST00000555351 CCDC88CQ9P219 2028 aa11.26□□□□□ -0.61
VRK1-204ENST00000555351 FOXS1O43638 330 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 VPS4BO75351 444 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 NSA2O95478 260 aaKnown RBP11.25□□□□□ -0.61
VRK1-204ENST00000555351 GSTA2P09210 222 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 ACPPP15309 386 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 NPPBP16860 134 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 ZNF37AP17032 561 aaPredicted RBP11.25□□□□□ -0.61
VRK1-204ENST00000555351 GRK3P35626 688 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 RPL21P46778 160 aaKnown RBP11.25□□□□□ -0.61
VRK1-204ENST00000555351 AVPR1BP47901 424 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 MLLT10P55197 1068 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 ETF1P62495 437 aaKnown RBP11.25□□□□□ -0.61
VRK1-204ENST00000555351 AP2B1P63010 937 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 CSNK1G2P78368 415 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 CDKL1Q00532 357 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 CAV1Q03135 178 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 NAE1Q13564 534 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 PHKG1Q16816 387 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 HKDC1Q2TB90 917 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 AGAP7PQ5VUJ5 663 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 NIPAL1Q6NVV3 410 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 VN1R4Q7Z5H5 301 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 ZC3HC1Q86WB0 502 aaKnown RBP11.25□□□□□ -0.61
VRK1-204ENST00000555351 ZADH2Q8N4Q0 377 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 TBC1D19Q8N5T2 526 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 GPATCH11Q8N954 259 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 Q8NA96 180 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 CAMKVQ8NCB2 501 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 FBXO36Q8NEA4 188 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 OR4K1Q8NGD4 311 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 VPS39Q96JC1 886 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 PWWP2AQ96N64 755 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 AGAP4Q96P64 663 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 MCMBPQ9BTE3 642 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 LHPPQ9H008 270 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 SOX17Q9H6I2 414 aaPredicted RBP11.25□□□□□ -0.61
VRK1-204ENST00000555351 SYNPO2LQ9H987 977 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 SLAMF7Q9NQ25 335 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 ARL15Q9NXU5 204 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 TRPC4Q9UBN4 977 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 C3orf18Q9UK00 162 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 VPS4AQ9UN37 437 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 SLC22A7Q9Y694 548 aa11.25□□□□□ -0.61
VRK1-204ENST00000555351 MDC1Q14676 2089 aaKnown RBP11.24□□□□□ -0.61
VRK1-204ENST00000555351 SETXQ7Z333 2677 aaKnown RBP11.24□□□□□ -0.61
VRK1-204ENST00000555351 LOC102723996A0A087X1L8 192 aa11.24□□□□□ -0.61
VRK1-204ENST00000555351 IDSB3KWA1 339 aa11.24□□□□□ -0.61
VRK1-204ENST00000555351 MAP2K7O14733 419 aa11.24□□□□□ -0.61
VRK1-204ENST00000555351 SLC35G6P0C7Q6 338 aa11.24□□□□□ -0.61
VRK1-204ENST00000555351 ICAM2P13598 275 aa11.24□□□□□ -0.61
VRK1-204ENST00000555351 IL10P22301 178 aa11.24□□□□□ -0.61
VRK1-204ENST00000555351 CXCR2P25025 360 aa11.24□□□□□ -0.61
VRK1-204ENST00000555351 ITGA3P26006 1051 aa11.24□□□□□ -0.61
VRK1-204ENST00000555351 HNMTP50135 292 aa11.24□□□□□ -0.61
VRK1-204ENST00000555351 EMP2P54851 167 aa11.24□□□□□ -0.61
VRK1-204ENST00000555351 UBAP2LQ14157 1087 aaKnown RBP11.24□□□□□ -0.61
VRK1-204ENST00000555351 INPP5JQ15735 1006 aaPredicted RBP11.24□□□□□ -0.61
VRK1-204ENST00000555351 HP1BP3Q5SSJ5 553 aaPredicted RBP11.24□□□□□ -0.61
VRK1-204ENST00000555351 TMEM214Q6NUQ4 689 aaKnown RBP11.24□□□□□ -0.61
VRK1-204ENST00000555351 SBSNQ6UWP8 590 aa11.24□□□□□ -0.61
VRK1-204ENST00000555351 RIPOR1Q6ZS17 1223 aa11.24□□□□□ -0.61
VRK1-204ENST00000555351 Q6ZS92 163 aa11.24□□□□□ -0.61
VRK1-204ENST00000555351 NDUFAF7Q7L592 441 aa11.24□□□□□ -0.61
VRK1-204ENST00000555351 ZNF572Q7Z3I7 529 aaPredicted RBP11.24□□□□□ -0.61
VRK1-204ENST00000555351 ANKMY2Q8IV38 441 aa11.24□□□□□ -0.61
VRK1-204ENST00000555351 ZBED8Q8IZ13 594 aa11.24□□□□□ -0.61
VRK1-204ENST00000555351 IQCKQ8N0W5 287 aa11.24□□□□□ -0.61
VRK1-204ENST00000555351 METTL27Q8N6F8 245 aaPredicted RBP11.24□□□□□ -0.61
VRK1-204ENST00000555351 PPP4R1Q8TF05 950 aa11.24□□□□□ -0.61
VRK1-204ENST00000555351 PYROXD1Q8WU10 500 aa11.24□□□□□ -0.61
VRK1-204ENST00000555351 CDKL2Q92772 493 aa11.24□□□□□ -0.61
VRK1-204ENST00000555351 MMABQ96EY8 250 aaPredicted RBP11.24□□□□□ -0.61
VRK1-204ENST00000555351 LMF1Q96S06 567 aa11.24□□□□□ -0.61
VRK1-204ENST00000555351 OLFM1Q99784 485 aa11.24□□□□□ -0.61
VRK1-204ENST00000555351 SLC29A3Q9BZD2 475 aa11.24□□□□□ -0.61
VRK1-204ENST00000555351 TRIM31Q9BZY9 425 aa11.24□□□□□ -0.61
VRK1-204ENST00000555351 RHOJQ9H4E5 214 aa11.24□□□□□ -0.61
VRK1-204ENST00000555351 CLK4Q9HAZ1 481 aaKnown RBP11.24□□□□□ -0.61
VRK1-204ENST00000555351 SNX24Q9Y343 169 aa11.24□□□□□ -0.61
VRK1-204ENST00000555351 FLNBO75369 2602 aaKnown RBP11.24□□□□□ -0.61
VRK1-204ENST00000555351 FLNCQ14315 2725 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms