RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 TNFRSF10DQ9UBN6 386 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 PRPF19Q9UMS4 504 aaKnown RBP6.71□□□□□ -1.33
SYNE2-216ENST00000555002 SH2B3Q9UQQ2 575 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 OR6C6A6NF89 314 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 B4GALT5O43286 388 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 THEGLP0DJG4 465 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 COL6A2P12110 1019 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 POLR2HP52434 150 aaKnown RBP6.71□□□□□ -1.34
SYNE2-216ENST00000555002 GRM2Q14416 872 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 ABRAXAS2Q15018 415 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 BCL2A1Q16548 175 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 IQCCQ4KMZ1 466 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 OR4E2Q8NGC2 313 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 HSFY1Q96LI6 401 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 DENND2DQ9H6A0 471 aaPredicted RBP6.71□□□□□ -1.34
SYNE2-216ENST00000555002 TMEM134Q9H6X4 195 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 SMPD3Q9NY59 655 aaPredicted RBP6.71□□□□□ -1.34
SYNE2-216ENST00000555002 PCYOX1Q9UHG3 505 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 SULT1B1O43704 296 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 S100PP25815 95 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 CRISP3P54108 245 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 COL9A2Q14055 689 aaPredicted RBP6.71□□□□□ -1.34
SYNE2-216ENST00000555002 PPM1JQ5JR12 505 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 GPR157Q5UAW9 335 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 PAOXQ6QHF9 649 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 NYAP1Q6ZVC0 841 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 ACMSDQ8TDX5 336 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 PXYLP1Q8TE99 480 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 TM9SF3Q9HD45 589 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 KCNQ5Q9NR82 932 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 KBTBD4Q9NVX7 518 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 GTF2IRD1Q9UHL9 959 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 PCDHB10Q9UN67 800 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 C2orf72A6NCS6 295 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 A8MV72 311 aaPredicted RBP6.71□□□□□ -1.34
SYNE2-216ENST00000555002 CASC3O15234 703 aaKnown RBP6.71□□□□□ -1.34
SYNE2-216ENST00000555002 GRID2O43424 1007 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 CD3GP09693 182 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 VIPR1P32241 457 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 MPIP34949 423 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 TMBIM6P55061 237 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 SLC5A9Q2M3M2 681 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 WDR45BQ5MNZ6 344 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 CDKAL1Q5VV42 579 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 ADGRA1Q86SQ6 560 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 ZNF808Q8N4W9 903 aaPredicted RBP6.71□□□□□ -1.34
SYNE2-216ENST00000555002 AGAP2Q99490 1192 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 BCO2Q9BYV7 579 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 SLC38A8A6NNN8 435 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 EDNRBP24530 442 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 POU3F4P49335 361 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 CLCNKAP51800 687 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 TAS2R40P59535 323 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 ADAM15Q13444 863 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 FUT10Q6P4F1 479 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 NIPA1Q7RTP0 329 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 UBQLNLQ8IYU4 475 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 TSEN2Q8NCE0 465 aaKnown RBP6.71□□□□□ -1.34
SYNE2-216ENST00000555002 C7orf34Q96L11 122 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 LHX5Q9H2C1 402 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 GRHPRQ9UBQ7 328 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 SLC7A11Q9UPY5 501 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 PCDHGC4Q9Y5F7 938 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 TLR4O00206 839 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 HMGN1P05114 100 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 GLDCP23378 1020 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 GHRHRQ02643 423 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 GRIK5Q16478 980 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 CRB2Q5IJ48 1285 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 B3GNT5Q9BYG0 378 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 GBA3Q9H227 469 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 TBCCD1Q9NVR7 557 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 UTS2RQ9UKP6 389 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 PREX2Q70Z35 1606 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 A0A0U1RQJ8 604 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 NR2C1P13056 603 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 CCND3P30281 292 aaPredicted RBP6.71□□□□□ -1.34
SYNE2-216ENST00000555002 RPL7AP62424 266 aaKnown RBP6.71□□□□□ -1.34
SYNE2-216ENST00000555002 UGT8Q16880 541 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 VWA5B1Q5TIE3 1220 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 ZDHHC21Q8IVQ6 265 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 COL21A1Q96P44 957 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 SLC39A1Q9NY26 324 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 TMEM98Q9Y2Y6 226 aa6.71□□□□□ -1.34
SYNE2-216ENST00000555002 FAM234BA2RU67 622 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 AGAP5A6NIR3 686 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 C8orf89P0DMQ9 161 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 CSKP41240 450 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 GAD2Q05329 585 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 RPA4Q13156 261 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 GNMTQ14749 295 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 SLC1A5Q15758 541 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 ASTE1Q2TB18 679 aaPredicted RBP6.7□□□□□ -1.34
SYNE2-216ENST00000555002 ARSIQ5FYB1 569 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 PRAMEF14Q5SWL7 426 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 PRAMEF13Q5VWM6 474 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 PAMR1Q6UXH9 720 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 CFAP77Q6ZQR2 320 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 CPNE9Q8IYJ1 553 aa6.7□□□□□ -1.34
SYNE2-216ENST00000555002 PPTC7Q8NI37 304 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms