RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 NSL1Q96IY1 281 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 RAB3IPQ96QF0 476 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-214ENST00000554604 PANX3Q96QZ0 392 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 TCF12Q99081 682 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 OLFM1Q99784 485 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 GATA5Q9BWX5 397 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-214ENST00000554604 FAM117AQ9C073 453 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 DRC3Q9H069 523 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 KLHL25Q9H0H3 589 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 SYTL2Q9HCH5 934 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 LHX9Q9NQ69 397 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 IGSF5Q9NSI5 407 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 ACTR10Q9NZ32 417 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 GNPTGQ9UJJ9 305 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 HAO1Q9UJM8 370 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 ICKQ9UPZ9 632 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 MRPS18BQ9Y676 258 aaKnown RBP11.98□□□□□ -0.49
SHMT2-214ENST00000554604 ANKRD12Q6UB98 2062 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 IQCF5A8MTL0 148 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 B8ZZF3 427 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 TMEM150CB9EJG8 249 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 KPNA5O15131 536 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 MGRN1O60291 552 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 RBP1P09455 135 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 KITP10721 976 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 PVRP15151 417 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 CYP2A7P20853 494 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 FDXRP22570 491 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 F8A1P23610 371 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 PTPN4P29074 926 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 ARRB2P32121 409 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 SERPINB5P36952 375 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 POLE2P56282 527 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 DNAJB13P59910 316 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 KCNJ2P63252 427 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 ELF3P78545 371 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-214ENST00000554604 RIPK1Q13546 671 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 DNASE1L3Q13609 305 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 DEFB109BQ30KR1 87 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 TECRLQ5HYJ1 363 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 SPESP1Q6UW49 350 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 PACS2Q86VP3 889 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 SLC22A15Q8IZD6 547 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 CT55Q8WUE5 264 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 SKA2Q8WVK7 121 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-214ENST00000554604 SLC7A6OSQ96CW6 309 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-214ENST00000554604 CCDC126Q96EE4 140 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 PTCD3Q96EY7 689 aaKnown RBP11.97□□□□□ -0.49
SHMT2-214ENST00000554604 UBXN10Q96LJ8 280 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 NDNQ99608 321 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 SLC7A5P2Q9GIP4 190 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 ADNPQ9H2P0 1102 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 OR6C2Q9NZP2 312 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 CPSF2Q9P2I0 782 aaKnown RBP11.97□□□□□ -0.49
SHMT2-214ENST00000554604 XPR1Q9UBH6 696 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 MARCOQ9UEW3 520 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-214ENST00000554604 SERTAD3Q9UJW9 196 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 PLAGL1Q9UM63 463 aa11.97□□□□□ -0.49
SHMT2-214ENST00000554604 HEMK1Q9Y5R4 338 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-214ENST00000554604 MED13Q9UHV7 2174 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 FER1L5A0AVI2 2057 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 MYO18BQ8IUG5 2567 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 NBASA2RRP1 2371 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 ISM1B1AKI9 464 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 C21orf140B9A014 251 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 ZNF195O14628 629 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 DLX3O60479 287 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 NPHS1O60500 1241 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 CBX6O95503 412 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 KLK3P07288 261 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-214ENST00000554604 SERPINA6P08185 405 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 CHRM5P08912 532 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-214ENST00000554604 CALB2P22676 271 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 ATP5F1P24539 256 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-214ENST00000554604 AOAHP28039 575 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 GLRBP48167 497 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 RPS15P62841 145 aaKnown RBP11.96□□□□□ -0.49
SHMT2-214ENST00000554604 ABRQ12979 859 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 RCN2Q14257 317 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 ERV3-1Q14264 604 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 ZNF460Q14592 562 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 ACAP2Q15057 778 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 CRTC2Q53ET0 693 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-214ENST00000554604 ATP1A1-AS1Q5TC04 95 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 KLC3Q6P597 504 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 TTC23LQ6PF05 361 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 ATG14Q6ZNE5 492 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 PRICKLE2Q7Z3G6 844 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 VRK3Q8IV63 474 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 GPR135Q8IZ08 494 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 LKAAEAR1Q8TD35 194 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 APOBEC4Q8WW27 367 aaKnown RBP11.96□□□□□ -0.49
SHMT2-214ENST00000554604 MR1Q95460 341 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 CLIP3Q96DZ5 547 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 TRAPPC9Q96Q05 1148 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 NMUR2Q9GZQ4 415 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 TWSG1Q9GZX9 223 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 ILKAPQ9H0C8 392 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-214ENST00000554604 GPAMQ9HCL2 828 aa11.96□□□□□ -0.49
SHMT2-214ENST00000554604 LATS2Q9NRM7 1088 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms