RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, human

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R3A-204	ENST00000554574	KLC4	Q9NSK0	619 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	TREX1	Q9NSU2	369 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ST6GALNAC2	Q9UJ37	374 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	TCAF1	Q9Y4C2	921 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	COPG1	Q9Y678	874 aa	Known RBP	4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	RANBP2	P49792	3224 aa	Known RBP	4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	LOC285095	A0A1B0GVY8	99 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	TYW5	A2RUC4	315 aa	Known RBP	4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	YY2	O15391	372 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	BIRC5	O15392	142 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	EDF1	O60869	148 aa	Known RBP	4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	GLRA3	O75311	464 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	KIAA0754	O94854	1291 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	KAT7	O95251	611 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	CXCL14	O95715	111 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	IL1B	P01584	269 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	RHOC	P08134	193 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	GSTA1	P08263	222 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SERPINF2	P08697	491 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	IRF1	P10914	325 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	HLA-DPA1	P20036	260 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	GABRR2	P28476	465 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	CDC25C	P30307	473 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ARCN1	P48444	511 aa	Known RBP	4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	DIO1	P49895	249 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SELENOP	P49908	381 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SERPINH1	P50454	418 aa	Known RBP	4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SGSH	P51688	502 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	MAX	P61244	160 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SLC7A9	P82251	487 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	PDE1B	Q01064	536 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	CDK18	Q07002	472 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	TBL3	Q12788	808 aa	Known RBP	4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	IFT88	Q13099	833 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	MSLN	Q13421	630 aa	Predicted RBP	4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	LAMB3	Q13751	1172 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	IHH	Q14623	411 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SEC23B	Q15437	767 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ZKSCAN8	Q15776	578 aa	Predicted RBP	4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	TBCE	Q15813	527 aa	Predicted RBP	4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	UGP2	Q16851	508 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	TXNDC8	Q6A555	127 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	KIAA0930	Q6ICG6	404 aa	Predicted RBP	4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	CGB2	Q6NT52	195 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	CDHR3	Q6ZTQ4	885 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574		Q6ZWC4	215 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	NLRP9	Q7RTR0	991 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SPATA21	Q7Z572	469 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	TMC8	Q8IU68	726 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ELMOD1	Q8N336	334 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ARL14EP	Q8N8R7	260 aa	Predicted RBP	4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	HJURP	Q8NCD3	748 aa	Predicted RBP	4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	OR52K2	Q8NGK3	314 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	GABPB2	Q8TAK5	448 aa	Predicted RBP	4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	RAB3IL1	Q8TBN0	382 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	CREB3L4	Q8TEY5	395 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SNRNP27	Q8WVK2	155 aa	Known RBP	4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	MRPS31	Q92665	395 aa	Known RBP	4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	PEX13	Q92968	403 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	RNFT2	Q96EX2	444 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	FEM1C	Q96JP0	617 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	CYP2S1	Q96SQ9	504 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	AGAP2	Q99490	1192 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SEMA3C	Q99985	751 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	KRTAP4-9	Q9BYQ8	210 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SYNPO2L	Q9H987	977 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	TRPC7	Q9HCX4	862 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	C20orf96	Q9NUD7	363 aa	Predicted RBP	4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SMPD4	Q9NXE4	827 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	KCTD5	Q9NXV2	234 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	IL1RAPL1	Q9NZN1	696 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	EHD3	Q9NZN3	535 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SLC17A6	Q9P2U8	582 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	MGAT4C	Q9UBM8	478 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	DCDC2	Q9UHG0	476 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	PRDM4	Q9UKN5	801 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ZNF510	Q9Y2H8	683 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ARL2BP	Q9Y2Y0	163 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	RRP15	Q9Y3B9	282 aa	Known RBP	4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	KIF26A	Q9ULI4	1882 aa	Predicted RBP	4.63	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	PLXNB3	Q9ULL4	1909 aa		4.63	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	DOCK8	Q8NF50	2099 aa		4.63	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	CENPVL1	A0A0U1RR11	272 aa		4.63	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SH2D7	A6NKC9	451 aa	Predicted RBP	4.63	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	C5orf67	F2Z3F1	127 aa		4.63	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	AHCYL1	O43865	530 aa		4.63	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	TMPRSS11D	O60235	418 aa		4.63	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	VAPB	O95292	243 aa		4.63	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	FGF19	O95750	216 aa		4.63	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ONECUT2	O95948	504 aa		4.63	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	GLUD1	P00367	558 aa		4.63	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	FGF1	P05230	155 aa		4.63	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	HSPA1A	P0DMV8	641 aa	Known RBP	4.63	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	HSPA1B	P0DMV9	641 aa	Known RBP	4.63	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ITGAM	P11215	1152 aa		4.63	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	EPHA8	P29322	1005 aa	Predicted RBP	4.63	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	TYK2	P29597	1187 aa		4.63	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	HOXA9	P31269	272 aa		4.63	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	GALNS	P34059	522 aa		4.63	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	CA8	P35219	290 aa		4.63	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms