RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 FABP12A6NFH5 140 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 GRXCR2A6NFK2 248 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 EFCAB7A8K855 629 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 INMT-MINDY4F8WBC2 141 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 DDX39AO00148 427 aaKnown RBP9.26□□□□□ -0.93
SIX4-202ENST00000554079 E2F3O00716 465 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 MDM4O15151 490 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 LYRM1O43325 122 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 AKAP8O43823 692 aaKnown RBP9.26□□□□□ -0.93
SIX4-202ENST00000554079 AOC2O75106 756 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 EIF3GO75821 320 aaKnown RBP eCLIP9.26□□□□□ -0.93
SIX4-202ENST00000554079 OR4F21O95013 312 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 HTR3BO95264 441 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 HGFP14210 728 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 TGM4P49221 684 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 RORCP51449 518 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 AGFG1P52594 562 aaKnown RBP9.26□□□□□ -0.93
SIX4-202ENST00000554079 SPP2Q13103 211 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 DMP1Q13316 513 aaPredicted RBP9.26□□□□□ -0.93
SIX4-202ENST00000554079 DSG2Q14126 1118 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 TSTQ16762 297 aaKnown RBP9.26□□□□□ -0.93
SIX4-202ENST00000554079 PYDC2Q56P42 97 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 FAM102AQ5T9C2 384 aaPredicted RBP9.26□□□□□ -0.93
SIX4-202ENST00000554079 HES5Q5TA89 166 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 NCBP2-AS2Q69YL0 99 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 OR4F3Q6IEY1 312 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 PKN3Q6P5Z2 889 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 RASSF6Q6ZTQ3 369 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 CEP68Q76N32 757 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 LRRC8DQ7L1W4 858 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 DDX53Q86TM3 631 aaKnown RBP9.26□□□□□ -0.93
SIX4-202ENST00000554079 DENND1CQ8IV53 801 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 NKAIN4Q8IVV8 208 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 SPNS2Q8IVW8 549 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 BVESQ8NE79 360 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 LPCAT1Q8NF37 534 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 DCAF4Q8WV16 495 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 TBC1D20Q96BZ9 403 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 L3HYPDHQ96EM0 354 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 CRELD1Q96HD1 420 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 EXOC2Q96KP1 924 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 ZBTB18Q99592 522 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 GAL3ST1Q99999 423 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 SPOCK3Q9BQ16 436 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 TMEM175Q9BSA9 504 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 SLC29A3Q9BZD2 475 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 KCNH6Q9H252 994 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 PRDM12Q9H4Q4 367 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 CASS4Q9NQ75 786 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 EPHA6Q9UF33 1036 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 GPN3Q9UHW5 284 aaPredicted RBP9.26□□□□□ -0.93
SIX4-202ENST00000554079 CDH10Q9Y6N8 788 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 TNS1Q9HBL0 1735 aaKnown RBP9.26□□□□□ -0.93
SIX4-202ENST00000554079 LOC102723532A0A0G2JNH3 316 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 C19orf81C9J6K1 198 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 H7C2Y5 167 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 GTPBP1O00178 669 aaKnown RBP9.26□□□□□ -0.93
SIX4-202ENST00000554079 LALBAP00709 142 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 IGHV2-70P01814 119 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 HRGP04196 525 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 TSPAN19P0C672 248 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 PRR35P0CG20 571 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 RNF224P0DH78 156 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 PRKAR1AP10644 381 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 NMBRP28336 390 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 SSTR4P31391 388 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 CASP2P42575 452 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 PREPP48147 710 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 SMSP52788 366 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 TAS2R39P59534 338 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 UFM1P61960 85 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 CDH18Q13634 790 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 LAPTM4AQ15012 233 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 RPS6KA2Q15349 733 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 MPEG1Q2M385 716 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 UNC50Q53HI1 259 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 CARD16Q5EG05 197 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 CDKL4Q5MAI5 379 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 ZNF678Q5SXM1 525 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 KANK2Q63ZY3 851 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 ZNF425Q6IV72 752 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 INTS5Q6P9B9 1019 aaKnown RBP9.26□□□□□ -0.93
SIX4-202ENST00000554079 BEND4Q6ZU67 534 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 EIF3MQ7L2H7 374 aaKnown RBP9.26□□□□□ -0.93
SIX4-202ENST00000554079 PGBD3Q8N328 593 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 LRRC17Q8N6Y2 441 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 EFHBQ8N7U6 833 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 WDR36Q8NI36 951 aaKnown RBP9.26□□□□□ -0.93
SIX4-202ENST00000554079 NXPE2Q96DL1 559 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 MYOCQ99972 504 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 RBCK1Q9BYM8 510 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 HAPLN2Q9GZV7 340 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 EQTNQ9NQ60 294 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 ZNF275Q9NSD4 429 aaPredicted RBP9.26□□□□□ -0.93
SIX4-202ENST00000554079 MLXQ9UH92 298 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 PADI2Q9Y2J8 665 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 GJA3Q9Y6H8 435 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 DNMT3AQ9Y6K1 912 aaPredicted RBP9.26□□□□□ -0.93
SIX4-202ENST00000554079 A0A1B0GTQ1 180 aa9.25□□□□□ -0.93
SIX4-202ENST00000554079 A0A1B0GWJ7 208 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms