RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 PLCL2Q9UPR0 1127 aa12.49□□□□□ -0.41
RAB5C-206ENST00000550406 PCDHGA8Q9Y5G5 932 aa12.49□□□□□ -0.41
RAB5C-206ENST00000550406 CCDC88CQ9P219 2028 aa12.49□□□□□ -0.41
RAB5C-206ENST00000550406 TMEM120BA0PK00 339 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 TMEM150CB9EJG8 249 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 H0YGG7 62 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 CLGNO14967 610 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 TM9SF1O15321 606 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 TRIM13O60858 407 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 TNFSF15O95150 251 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 ZWINTO95229 277 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 TIAF1O95411 115 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 JMJD7P0C870 316 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 EZRP15311 586 aaKnown RBP12.48□□□□□ -0.41
RAB5C-206ENST00000550406 GCGRP47871 477 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 SERPINB4P48594 390 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 SLC18A1P54219 525 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 NAGLUP54802 743 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 ARF3P61204 181 aaPredicted RBP12.48□□□□□ -0.41
RAB5C-206ENST00000550406 SNRPNP63162 240 aaKnown RBP12.48□□□□□ -0.41
RAB5C-206ENST00000550406 SHC2P98077 582 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 ACY1Q03154 408 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 CLCQ05315 142 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 FOXM1Q08050 763 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 CYP4F3Q08477 520 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 TUBB3Q13509 450 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 COL9A2Q14055 689 aaPredicted RBP12.48□□□□□ -0.41
RAB5C-206ENST00000550406 NAA25Q14CX7 972 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 TBCCQ15814 346 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 LIPMQ5VYY2 423 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 ANKRD53Q8N9V6 530 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 TM4SF19Q96DZ7 209 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 PKNOX2Q96KN3 472 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 TAAR9Q96RI9 348 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 ZFYVE21Q9BQ24 234 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 SPRY4Q9C004 299 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 EHD1Q9H4M9 534 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 MLXIPLQ9NP71 852 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 SEMA4BQ9NPR2 832 aaPredicted RBP12.48□□□□□ -0.41
RAB5C-206ENST00000550406 ASCL3Q9NQ33 180 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 ENAMQ9NRM1 1142 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 STARD5Q9NSY2 213 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 AKAP7Q9P0M2 348 aaPredicted RBP12.48□□□□□ -0.41
RAB5C-206ENST00000550406 RNF11Q9Y3C5 154 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 PCDHGA4Q9Y5G9 962 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 B3GALT1Q9Y5Z6 326 aa12.48□□□□□ -0.41
RAB5C-206ENST00000550406 KCNE1BA0A087WTH5 132 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 TRBC2A0A5B9 178 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 CDRT15L2A8MXV6 281 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 UBFD1O14562 309 aaKnown RBP12.47□□□□□ -0.41
RAB5C-206ENST00000550406 DYNC1I1O14576 645 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 POLR1CO15160 346 aaPredicted RBP12.47□□□□□ -0.41
RAB5C-206ENST00000550406 P2RX6O15547 441 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 ATP8B1O43520 1251 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 SUPT7LO94864 414 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 MED26O95402 600 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 STATHP02808 62 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 ZNF28P17035 718 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 ARRB2P32121 409 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 SCTRP47872 440 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 VSX2P58304 361 aaPredicted RBP12.47□□□□□ -0.41
RAB5C-206ENST00000550406 ERVPABLB-1P60509 514 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 IRF8Q02556 426 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 TRAF3Q13114 568 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 SLBPQ14493 270 aaKnown RBP eCLIP12.47□□□□□ -0.41
RAB5C-206ENST00000550406 IL11RAQ14626 422 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 XKR6Q5GH73 641 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 ZC3H12BQ5HYM0 836 aaKnown RBP12.47□□□□□ -0.41
RAB5C-206ENST00000550406 ADNP2Q6IQ32 1131 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 PWWP2BQ6NUJ5 590 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 IGF2-ASQ6U949 168 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 ERMP1Q7Z2K6 904 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 VN1R5Q7Z5H4 357 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 SYVN1Q86TM6 617 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 LSMEM2Q8N112 164 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 ARHGEF39Q8N4T4 335 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 CCNYL1Q8N7R7 359 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 ANKRD42Q8N9B4 389 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 L3MBTL4Q8NA19 623 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 MFSD9Q8NBP5 474 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 SLC38A9Q8NBW4 561 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 TRPC4APQ8TEL6 797 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 CCDC126Q96EE4 140 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 PTCD3Q96EY7 689 aaKnown RBP12.47□□□□□ -0.41
RAB5C-206ENST00000550406 CDK15Q96Q40 435 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 MACROD1Q9BQ69 325 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 SELENOSQ9BQE4 189 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 NTMT1Q9BV86 223 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 NT5DC2Q9H857 520 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 FOXJ2Q9P0K8 574 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 MID2Q9UJV3 735 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 RARRES3Q9UL19 164 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 ANGPTL3Q9Y5C1 460 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 PCDHGA3Q9Y5H0 932 aa12.47□□□□□ -0.41
RAB5C-206ENST00000550406 WDFY3Q8IZQ1 3526 aa12.46□□□□□ -0.41
RAB5C-206ENST00000550406 CACNA1AO00555 2505 aa12.46□□□□□ -0.41
RAB5C-206ENST00000550406 AKAP13Q12802 2813 aa12.46□□□□□ -0.41
RAB5C-206ENST00000550406 WDR91A4D1P6 747 aa12.46□□□□□ -0.41
RAB5C-206ENST00000550406 HMGB1P1B2RPK0 211 aaPredicted RBP12.46□□□□□ -0.41
RAB5C-206ENST00000550406 MAP3K7O43318 606 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms